Cvar027738.1
Basic Information
- Insect
- Cheilosia variabilis
- Gene Symbol
- Csrnp2
- Assembly
- GCA_951230905.1
- Location
- OX579680.1:33137857-33140647[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-94 3.9e-90 302.4 7.3 2 218 267 467 266 467 0.92 2 4 0.074 2.4e+03 -1.0 0.1 21 66 489 534 487 544 0.72 3 4 0.15 4.8e+03 -1.9 1.0 67 115 737 787 723 795 0.59 4 4 0.37 1.2e+04 -3.3 3.8 72 103 790 821 776 869 0.49
Sequence Information
- Coding Sequence
- ATGTTCACACCTATTAAAAATCTTCTCACGTACATCCACAAGAATGCAAGCGGCTCGACATTTTTCGGAGGAACACCATCGAGCACAGAATTGAACGACGataccgccaccaccaccaccacaatgGAAAGTGAATTGGGAGAAACTAGCTCCAGCGATAGCGGCCCACCGCTAATAGAACCACCCTCCGTGGGTAGTAAAAATCACGATCAGAATGAAAATGAAGTTCTAGAAGCGATCTCCTATGAGACTTGTCACACAGATGATCCGCTGCTGATCACGGAAGACGAAGTGGAGAAGGACATATTTTTGGACTTTCAAACCGAAGCAGAGAACGAGGAAAACGAAGTCGATTTTCCCACCAATGAAGTGATTGTAATGGAAGATCCCGATTTGAATGCCTCAGTCAATTCCGACCCGGGCACAGATCCATTGGCAATAGATGATTGCAATGTGCTCCCGTTGAACTCCCCCAACCCATTGGACACCTCAGCCGATGGCGATGGCCTATATATGGTTGATATCGATGAGATTGAGGGCAAACCTTCAGAAATAACCGACGCACAAGTGCTGGCAGCCGAAAAAGCCGCCGACGAACAAGAGATTCGTAGCGATGGCTCAGATTCTGGCCTTGGCTCGGAAACATCAGCTCTGCAGTCGACAGTGACCAGTGTCGCAGATATGAGCACTTGTTCGACTGCAAGCACTTCGCCAATGGTAGAGAAGGTTCCGTTGCGATCGAATTTGAAGAGACGCCTTCATGGGGATGTTAGCGAGAGTGAACAGTTGCAAAAGAAGCCCAGGCGATCGATTAATTTCGACAGCGTGAAAGTGTTCTATTTCCCACGTATTCAGGGCCATGGATGTATTCCTTCACAGGGTGGATGCACTTTGGGCATGGGTGCGCATCACATCAGCTTTAAGACTTTCACTTTAGCGGAGCACGCAGCAGAGCTGAGACGTGCTCACAAGTTGCAGCTACAGGAGATAAATCCCAGAGCATCCTCTAGCGATGATTCAGACAGTGATGAGGAGTTAAGCGAGGGCAGTGGCTCCGATTTGGACACAGATACAAATGGTTTTCTTCAGCCGGTGTCACCGAAACAACGGAGAGCTTTGCTGAAAGTGGCCGGAGTGCGGAAGATAGATCCCAACGAAAAGATCGAGTGTCGAGATATTCGAAACTCCCGTGAGGTGTGTGGCTGTTCGTGCAGAGACTTTTGTGACCCCGATACGTGTGCCTGCAGTCAAGCTGGAATTAAGTGTCAGGTTGACCGCACAATGTTCCCCTGCGGTTGTTCGCGTGACGCCTGCGGCAACGTCCACGGTCGCATTGAGTTCAATCCGGCACGAGTGCGAACTCACTACATTCACACGATTATGCGACTGGAAATGGAAAACCGACAACAAAAGCGATCCCACGAAATAGGCTCCCAACTAGGTGTGCCCTCAGTACCTCATTTAGCCTACAACAGCGTCCCGCCCATGGCCAGCAGCACAACGGGTATCAATAGTTACAACACAATACCAACCTATGGCCTGGAGCATAATTCTACCGCAGCAGCCCACgtctatcatcatcatcaattgCAGCAGCACAATGCGTATATGAACCATGTGCCACCATCTCATCCTGCCAGTGGGGCCTACGCCAATCTCATTGAGCCACCAATAGTAGCATTACCACTGCCGCAACCGCACAGCCATTATGTCAACACCACCGCCATTGTCGAACCAGAAAGCGTTGGTATTAGCAGCGGAAACTTGCTCTATCAAGACGTATCAATATATCCAGCAGTTCTACCAGCTCCACTACCACAGCCGACTGCTGCGGTATATGGCGACATACTAGCGCCCTATGCCACATCTACACCATATCACAGTGCCCCGGTTGTGGACGGTAGCTACTCAGCGAGCGTCTACAACAGCTACCAGAATACGCATCATTTGCAGAATCACCTGCCGCAACAGCCGTTTTTGGGGTACGCCACTGCATGCAATGGCGACTTGCATGAGTACACTGAATCACAGAGCAGCTTTATAAGCTTGAATACTCCAGAAGCCTGCTCCTCAAGGCTGTCGGCTATCAATGATCTCTTGCACAATAACCGAAATACAACGGCAGCGTTGATTGCCGTTTCACCGGTTCCTTCAGACGTCATTCCAGATGAGGCATCTGTTTCAGAGGACGAAGTTCAGGAGGCTGTTGTAGAGCAGGAAACTGTTGTAGGGCAGGAAGTTGTTGTAGAGCAGGAAACTGTTGTAAAGGATGAAGTGCAGGCTGTTGTCCGACACTCCGATATAGCTGATGACGACTGTGAAGTAAATGTGAAGGTGGAGGAGGCTGTTGGTGTCCAAAATgatcagaaaaaaaaggaaaacacccGCACTGCGAGCGACACCCTTTCGGAAACAGAAGAAACTCCATCATCTATTATTGAACAGGCTGACGACAACCGCAGTGAATCAACAGACACAGCCGCCACCACAAAACCAAAGGAAGACGACCCACAACCAGTGTCATCTCCCAAGGAGGACGAAGCCGCATCCAGTACCGGTGAGACCGATATAAATCAAACCACTGGCACGGAAACCGAAGAAGGACGCATCACCGATGTACTGACACCCATCGTGGACACCGTATCCGCTTAG
- Protein Sequence
- MFTPIKNLLTYIHKNASGSTFFGGTPSSTELNDDTATTTTTMESELGETSSSDSGPPLIEPPSVGSKNHDQNENEVLEAISYETCHTDDPLLITEDEVEKDIFLDFQTEAENEENEVDFPTNEVIVMEDPDLNASVNSDPGTDPLAIDDCNVLPLNSPNPLDTSADGDGLYMVDIDEIEGKPSEITDAQVLAAEKAADEQEIRSDGSDSGLGSETSALQSTVTSVADMSTCSTASTSPMVEKVPLRSNLKRRLHGDVSESEQLQKKPRRSINFDSVKVFYFPRIQGHGCIPSQGGCTLGMGAHHISFKTFTLAEHAAELRRAHKLQLQEINPRASSSDDSDSDEELSEGSGSDLDTDTNGFLQPVSPKQRRALLKVAGVRKIDPNEKIECRDIRNSREVCGCSCRDFCDPDTCACSQAGIKCQVDRTMFPCGCSRDACGNVHGRIEFNPARVRTHYIHTIMRLEMENRQQKRSHEIGSQLGVPSVPHLAYNSVPPMASSTTGINSYNTIPTYGLEHNSTAAAHVYHHHQLQQHNAYMNHVPPSHPASGAYANLIEPPIVALPLPQPHSHYVNTTAIVEPESVGISSGNLLYQDVSIYPAVLPAPLPQPTAAVYGDILAPYATSTPYHSAPVVDGSYSASVYNSYQNTHHLQNHLPQQPFLGYATACNGDLHEYTESQSSFISLNTPEACSSRLSAINDLLHNNRNTTAALIAVSPVPSDVIPDEASVSEDEVQEAVVEQETVVGQEVVVEQETVVKDEVQAVVRHSDIADDDCEVNVKVEEAVGVQNDQKKKENTRTASDTLSETEETPSSIIEQADDNRSESTDTAATTKPKEDDPQPVSSPKEDEAASSTGETDINQTTGTETEEGRITDVLTPIVDTVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314301;
- 90% Identity
- -
- 80% Identity
- -