Cvar019692.1
Basic Information
- Insect
- Cheilosia variabilis
- Gene Symbol
- dnajc2
- Assembly
- GCA_951230905.1
- Location
- OX579678.1:22136882-22138808[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00041 0.77 10.7 0.0 4 31 422 453 419 460 0.87 2 2 4e-11 7.6e-08 33.2 0.2 4 41 543 584 541 588 0.92
Sequence Information
- Coding Sequence
- ATGCAGTTACCTTCCGAATATTGCTCCCTGCCTTTTAATTTAATCTCTAAGGAAGTTCAGCGCGTGGGACTTAGGTTTCAAATATTTGTATGTCGCCATGATTCCCCGAGGAGAACCAAATCGGAATCGTTGGAAGCATGGGATTCAAGTGAATTTATCGTTGATATTAATTACTTACAATCTCTGGATCCGAAGGAATGGAAAGATCAGGACCATTATTCGGTTTTAGGGTTAGGTAATTTAAGGTTCAATGCTACGGATGAAGATATAAGGCGAGCTTATAGAAAAATGGTGTTACAACATCATCCTGATAAAAGAAAGTCTAAGGGTGAAGAGGTTAATGCAGATACTGACTATTTTACATGTATAACGAAGGCCTATGAAGTGTTAGGTACTCTTAAAACAAGGCGTGCATATGATTCTGTGGATCCGAAGTTTGACGACTCATTACCAACGCAATCGGAAATTGAAAATAgcttttatgaaatatttggaAAGTATTTTGACTTGAATTCTAGATGGAGTGAAAAGAAAGGTGTACCTTCCTTCGGTGACGAAAATGCAAAGCGGGAGGATGTAgataatttttacaatttttggtaTGATTTCGATTCGTGGCGCGAGTTTAGTTATCTCGATGAAgaagacaaagaaaaaggaCAAGATCGAGATGAACGGCGTTggattgaaaaacaaaataaagccgCCCGAATCAAAAGAAAGAAGGAGGAAATGTCTCGTATTCGGTCCTTGGTTGATTTAGCGTATAACAATGACAAAcgaattataaaatttaagaacGAGGAAAAGCAAAGAAAGATAGCAATGAAGAGAGCAAAAATGGACGCAGCTCAAGctcaaaaagaagaaatggaacGTGCTACTAGGGAAGCCCAAATAGCTAAAGAAAAAGCTGATAAGGCTGAACAAAAGAGGATAGAGAAAATCCGAATTGAAAAAGAACAGTATAGAAAAGCTATCAAAAAGGAAAGAAAGATATTCCGGGACAAAGCTAGAGAATGCAACTACTTTTCAACCTCGGACAAGGATTTGATAAAGAACATGGAAGGAGTTGAAAAAGTGTGCGAGATGTTAACATTATCTGAACTTCAAAATCTAAATAAAAGCAATGAAGAAAGTAGTACCCAATTCTTTGACGTTCTGCATGAACTAGAAAGCAGAATTCACCAGGAACACTTGGAAAACGTCCAAACAAAAATTGAGAATAAATCggacataaaaatattaaaaaagaacaatttaTGGACAAATGATAGTATTCAAATCCTTATTAAAGCTGTCAATCTGTTCCCAGCTGGAACTTCTCAAAGATGGGAAGTCATTGCTACATTTATGAACCAGCATAGTAACGGTGTGATGAACTTTACTTCTAGAGATGTCCTCAGTAAAGCTAAATCTCTTCAACAGAGTGATTTTtctaaaagtgttttaaaaaCGGAGGCCAATGACGGTGCCTttcaaagttttgaaaaatctaAAAAGGATATTCCAGTTGTGTCCGATAATTTGTTAGATAACTTTTCTGATACAAACGGCAGCGCAATTAATAGCGGATCCGATTCTGtaccattaaataaaaacattcaaagTACAAGCCAAAAAATTTGGACAAAAGAAGAGCAGGCTCTTTTAGAGCAAGCAATCAAGTCATTTCCAATGTCCACTCCCGACCGTTGGGACAGGATTGCTGAATGTATACCTAACAGAAGTAAAAAAGATTGTTTGCGAAGGGTTAAGGAATTAGTTGATTTGGTCAACTCGAAGAAAGATGCTAAACAAAGCGtaaagtaa
- Protein Sequence
- MQLPSEYCSLPFNLISKEVQRVGLRFQIFVCRHDSPRRTKSESLEAWDSSEFIVDINYLQSLDPKEWKDQDHYSVLGLGNLRFNATDEDIRRAYRKMVLQHHPDKRKSKGEEVNADTDYFTCITKAYEVLGTLKTRRAYDSVDPKFDDSLPTQSEIENSFYEIFGKYFDLNSRWSEKKGVPSFGDENAKREDVDNFYNFWYDFDSWREFSYLDEEDKEKGQDRDERRWIEKQNKAARIKRKKEEMSRIRSLVDLAYNNDKRIIKFKNEEKQRKIAMKRAKMDAAQAQKEEMERATREAQIAKEKADKAEQKRIEKIRIEKEQYRKAIKKERKIFRDKARECNYFSTSDKDLIKNMEGVEKVCEMLTLSELQNLNKSNEESSTQFFDVLHELESRIHQEHLENVQTKIENKSDIKILKKNNLWTNDSIQILIKAVNLFPAGTSQRWEVIATFMNQHSNGVMNFTSRDVLSKAKSLQQSDFSKSVLKTEANDGAFQSFEKSKKDIPVVSDNLLDNFSDTNGSAINSGSDSVPLNKNIQSTSQKIWTKEEQALLEQAIKSFPMSTPDRWDRIAECIPNRSKKDCLRRVKELVDLVNSKKDAKQSVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01253834;
- 90% Identity
- iTF_00314251;
- 80% Identity
- -