Cvar016561.1
Basic Information
- Insect
- Cheilosia variabilis
- Gene Symbol
- Dnajc1
- Assembly
- GCA_951230905.1
- Location
- OX579677.1:37986864-37988686[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5 4.7e+03 -1.4 0.0 4 39 20 54 19 60 0.55 2 3 1.8e-07 0.00035 21.5 0.0 4 38 302 339 299 340 0.86 3 3 4e-09 7.7e-06 26.8 0.5 3 43 388 433 386 435 0.89
Sequence Information
- Coding Sequence
- atgaaatcgTATATTAAATACCTGTTCGTGCTGAGTTTGATTTGTAGTGTTCACTCATGGAACAAAGACGAACTGGAGATCTTTGACTTGGTCGAAGAGATAAATCGTAACTTCTATGAACTAATGGGCATCTCACAGGATGCGACAGGTCAAGAAATTAAACGTGCTTTTCGGAACTTATCCATTGTACTTCACCCTGATAAAAATGACGCAGAAGATGCCAACATACAGTTTCGAAACCTTGTCTCCGTATACGAAGTACTCAAGGATCCATCTAAACGAGAGAAGTACAACAAAGTCTTGAAAGAGGGCCTGCCAAATTGGAAATCAGCACTCTACTACTATCGGCGAATGCGCAAAGTTGGACTGTACGAGGGTGCTGGAATCATTTTCCTAATCGTTTCTATCGGTCAGTACATTTTCTCTTGGGCAGCCTACTTAGAGAAGAAATATACTGCAGAGCAAGTAATTGGTTCCAAGctaaaaaaactacaaaaaaagaacaaaaatttggaTCTTGATGCCATCTTAAATGAGATACCGTCTCCATCTGTTCTGAACACCCTGCCCTTCCAAATACCGATGTTCTTCTGGAATTTGCCTACAACAATAAAGTCGGGTGTTTTAATGGCCAACGAAATAAAGGAAGCAGCACTGGAGAAGCGCAGATTGGAGGCTGAAGATCTTAAGCGGCAGCAAGAGATCGAAGAGGAAATTGAAGAAATGGCCCGAgctaaaaaggaaaagaaggaGAATATCCGCAAACGAAGGCAAGCAACAAAAGCCCCGGAAAAAACCGATGCTGAACTGGCTGGCTATTCGCAAATTCTTGCCAAGGAACTTACCGAAAAGGATGCCATGAAGCCAGTTACGCAGAAGAGCACACCCCTTAGTGGAGGTTTCTGGACCGACGAAGACTTAGCCGAGCTCATACGCCTTGTGAAGAAATACCCCGGCGGGGCTGGTAGCCGATGGGAGACTATCGCAGAGTCAATGAATCGTTCTGTTCAGGAGGTCACTTTCATGGCAGCTAAAATGAAAGAGAACGGCTACCGAATCCCCGGCCAAACGGACAGCGTAGCTGAAAATATTATCCAGGAAGCTGTTgtgaaaaaggaaaaagtcaAGAAAGTcgacaaaacaattcttattccTGAAACCAACTGGTCGCAAGAGCAGCAACGAGCCTTAGAGACGGCCATTGTCAAGTATCGGAAGGCCGCCAACTCAGACCGTTGGCAGAAAATAGCCAATTGCGTGCCGGAAAAGACCAAAGAAGAATGCCTTTTACGCTACAAATATCTATGTGACCTAGTGaagtcacaaaaaaataaaccagcTGCTGGTAGTGATGGAGATAAGAACAACGATGATGAAGAGGCTGCTGAAGCGGCTGTTGCAGTAACTCAGCGCATTGAGGAGATTCAGCAGGACGACGATGATCAGACTGATGTCGACGAAGAGGATGACGAACAAAAAGACGTCGAAGAAGAACCAACGCGAACAAAGGGAAAGCGACGAAATAAACGGAAAGAAAGAAGGCGAAAAAGAGACTTCTCCAGCGATGAAGATTCAGACGATGCTTATAATTATGAAGCAAACTAA
- Protein Sequence
- MKSYIKYLFVLSLICSVHSWNKDELEIFDLVEEINRNFYELMGISQDATGQEIKRAFRNLSIVLHPDKNDAEDANIQFRNLVSVYEVLKDPSKREKYNKVLKEGLPNWKSALYYYRRMRKVGLYEGAGIIFLIVSIGQYIFSWAAYLEKKYTAEQVIGSKLKKLQKKNKNLDLDAILNEIPSPSVLNTLPFQIPMFFWNLPTTIKSGVLMANEIKEAALEKRRLEAEDLKRQQEIEEEIEEMARAKKEKKENIRKRRQATKAPEKTDAELAGYSQILAKELTEKDAMKPVTQKSTPLSGGFWTDEDLAELIRLVKKYPGGAGSRWETIAESMNRSVQEVTFMAAKMKENGYRIPGQTDSVAENIIQEAVVKKEKVKKVDKTILIPETNWSQEQQRALETAIVKYRKAANSDRWQKIANCVPEKTKEECLLRYKYLCDLVKSQKNKPAAGSDGDKNNDDEEAAEAAVAVTQRIEEIQQDDDDQTDVDEEDDEQKDVEEEPTRTKGKRRNKRKERRRKRDFSSDEDSDDAYNYEAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01522580;
- 90% Identity
- iTF_00315901;
- 80% Identity
- -