Cvar002253.1
Basic Information
- Insect
- Cheilosia variabilis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_951230905.1
- Location
- OX579676.1:43451896-43485288[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-14 5.2e-11 42.9 0.1 1 44 371 415 371 416 0.93 2 2 6.4e-18 3.4e-15 56.3 0.0 1 43 887 930 887 932 0.95
Sequence Information
- Coding Sequence
- ATGCACTTCGATGTGGCAATATGCGCGGAGAAGCTTCTAAGTGACATCCTTTCGGCGTCACTGCCGCACTCCCTGTACACCAAAAGCGTGAGGCGAACTTTCGCTTGGACAAAAGACACCCCTAGCGGCTTAGAACGGGTTGCTGAGGAGTTGATGGGACGCAGGAAATGGAAGCAATATCAAGAAGCTTTAACGCGATCCCAATTAAGTGCAGATATCACAAATCTAGATCAAATCGGTTTTTCAAGTCAGAAACTCGAACCCGAACAAAAACTGGAAAAAGCCAAGGAAAATtcacatcagcagcagcaaccaTTCGAAAACGACGTACCAATAATCAAAACCGAAGTCTTCGACGAAAGAACTTTAATTTCGCCGCACATAAAAAAAGAAAACTTCGAAAGCAATTCAGTTGTAACGGGGGAAAGCATAAAACTTAATAATAATACAACTGCATCACATAgcattcatttaaataataacaatagtAAAAAGGATAACGAGGAGCAACTGCCGCCACCCACCACCAGTCCGACACCACCACCAGCAATACCCATCGATTGGACACCGAatgaaaagtgtaatttttgtgtTGACGGTAAACTCCTCACAGTGAACGAGAAGGGTGAATTAGTGGCCGAGTCGAGCCCGGCTTTGTCCGAGGCAGACCTCGCCAATAGACCACCAGGAGATACGGACAGTGATTCTAGCGACAGTCTGGTACCGGATGCTAGGGTCAATGCGAGTAAAATTCTAACATCACGCCTAAGAGATCCAGCTCCACCGAATATGACCTCATTGGAGTCGATGGCAGCACAATGGTCAGCAATTCAATCATTACCGGGACTACAGTCAGGCTTAGGGCAATTGTATCCAAgcATATTGTACAATTTAACTCAGCATGTGAACTCGGCCACACCAACTACCTCAGAGACATCGGCCGCCGCTATAAGTCCCCCACTCAAGGATTCTCCCAGTCCCAGTGATTTAACGGGTGAACAGCCATTAGATCTTAGTTCAAAACCATCACCAAATTCCTCAATCGGTGGAGATGCGAGGCATGTGCGAGCGAAACCCCGTGTGACACCATGCACTGGCCGTCGCACCTACACCGAGGAAGAGCTAAACAGCGCCCTGCAAGACATCATGAGCGGCCGGCTGGGTACACGTCGCGCAGCTGTTCAATACAACATTCCGCGTTCCACGTTGCGTAACAAGGTGTATAAAATCTCGTCGGGAGTGAAGCGTGAAACACCCACATCAATGCGTCACCTGGCCAGTCTTGAGGACCTGGCCGATGCCGACGATGATAAACAGGATCTATCGGCCGATGAGGAGGACAGCAGTGGTGATAAGATTCTGAGTAATTCCTTAGCATCACATGGGGGCGATGATCTTGCCAGTCGCTTTGCCGACGCAACACTTGCAGCGAGTATTCAGAAAATCTGCGCCGAACAAAATAGCCTAACGgcgcagcagcaacaacagcagcaacaacaacaacaccatcaGCCGCACAGCGATCATCAAGTCCATAACAAGCCGACAACATCACTCGAGTCACAGCCGAAGCGTAAGAGCGCAACACCTCAACCTCCACCGCCACAGACATCACCGATCGGGCAGAATGCCTGGCAGAACGTCTTGCTGCAGAGTTTGCTGATTTCCAGCGGTCTTCCCATCCAGCAGAACTTTGAGGAAACTCTACAATTGTTCAATGCCTTGCTGATGAAGCAGGATCCGAGTTTGATAAACCCCCAGTTGTTGATGCAACTACAGCAGTCACAACAGTCGCCACAGTCAgcccagcagcagcagcaacaccaccaccaccaccaccaccagcaacaGCAGAATCAACAGCACCACCATCTGCATTCCAATGCTGCAGGAAATGCGTCAGCCgctgcggcggcggcggcagctGCATCCTTTCAAAATCGTCAACCAAAGTCTGAAACACCAGAAACTGCGTCTTCAGTGGACCTGAACGAGACACTAGTTGACGATCCATCAGTTATTCTAAAAATTCCGTCCTACAAACCGGTAGCTGGATCCTCAACTTCATCAACATCTGCGGCGGCTGCAGTTGCAGCGGCGCTGTGTAACAACAAGAATGGTGAAAATTTGCCATCGAGCTCGCCAAAAATGCCCACAGCGGCGAACCTGTTGGGGGCCAATACCTCAACACAACAACtgcatcaccaccaccacctgcATCAGCATCACAATTCAGCGATAGCGTCGGCCAATAACATCCCTGGCATATCGCCTCCCTTGTTGCGTCACACTAGTGGTGAGTCTCAGTCGCCGCCAACTCTATCACTGCGCGACGTCATTGCCAACAGTATCAGTCGAACCTTCAGTCAGCAGGCGAACAAAGACAACACCAGTCCGAGTCCCGCTCATTCGTCATCGTCGGCGATGGATCACAATGACCAGTACAAACGGCCTAGCATATCAGTGATTAAGAATATCGGTGGAACCGATACCTCACGCTTTGCCACCGCCCCGAATCTACTTGGCGGTCACCACGCTAACTCTAATCACCACCATCACCAGCACCACCATCACCAGCATCACAGCCAAAATGCGGCGAACAACAATTTGGCCGGAGGCAAGGGTACACGGCCGAAACGCGGCAAGTATCGCAACTACGATCGTGACAGTCTCGTCGAAGCAGTTAAAGCGGTGCAACGCGGTGAAATGTCCGTGCATCGTGCTGGCAGTTACTATGGCGTGCCTCACTCGACACTCGAGTACAAGGTAAAGGAGCGCCACTTGATGCGGCCCCGAAAACGTGAGCCCAAGCCACAACCACCTCTTGACGATCGGACAGGGGGCAGCACCTCGGGTGGCAACACCTCGGGCTCCTCGGCGAACACCTCAAAAAACTCAAACATTCCAGGTCTATCGGCTGTAAATAGTTTAGATAAATTGAGTAAGGGCAGCGGCGCTGCCGGCACTAATGTTAACCAAAAACAATCGGCCGCTGGCAAGAGCAACCCACCATTCCCTACGACATCACCAAATGGCATGAAAATACCCTCGGCGTTATTCGAGCCAAACTTAGCCGCACAGCTGCAGTATCCGCCTCACCTCTTCTGGCACGGTGGCTTTGGCCCGCTTCAAATGGATTTCAGTCCTAGATCACAGGCGGCGGCGGCTGTTGCTGCGGCAGCGGCAGCCAGTAGTGGCCCTGGAAATCCGTCGTTTGCTGCCAACGCTGAGTTCTTAAAATCGCAAATGTTGCAGAGATTCCACGAGGAGCGAGGACCAACAAACGCCATCGGTAGTCCTCCAGCGCCGGCAAGTATCAGCAATTCCACCAGCAGCACCAACAACGCCAAAAGTGTACGCGACATCGCAGAGAACCTCTACGATCCGGGCAGTGCGAACGGTTCCTTCTTGGACGGAATCATCCGCAAGACTCTGGATCGCAATAATTCCGATATAGCCTTATTAGACCAACTGGCCAAGAACAGCAAACCACCTCAGCCGCGTCTAATGATGAACAATGACCGTTCACCGGTCGACTTGCTAAAGTTGAAGCGCTCCGCCAGTCCCATGCAGTATCACTCGCCGATGGACATCAAACGTGAACGCGCCAGTCCAACATCAGACTCTTCGAATAGTGATTCGGAAAGAAATCACCAACGGGACACCGACTCGGAACCACTACCGCCACAATCGCAACACCATGCGGTCGGACTGCATCACGCCCTATTAGGCGCTAGCAGTGACTTAAATGGCGCCCAACACGGGACCAGCTCCGAAAATAATCTACCAACGTCGCTGTCTGCGTCCTCGTCGTCTGCGGTCACCACCAGTATTCTGCACGAGAAATTGGGACAAATCAAGTCAGAAGCCGAGGATAGTTTATAG
- Protein Sequence
- MHFDVAICAEKLLSDILSASLPHSLYTKSVRRTFAWTKDTPSGLERVAEELMGRRKWKQYQEALTRSQLSADITNLDQIGFSSQKLEPEQKLEKAKENSHQQQQPFENDVPIIKTEVFDERTLISPHIKKENFESNSVVTGESIKLNNNTTASHSIHLNNNNSKKDNEEQLPPPTTSPTPPPAIPIDWTPNEKCNFCVDGKLLTVNEKGELVAESSPALSEADLANRPPGDTDSDSSDSLVPDARVNASKILTSRLRDPAPPNMTSLESMAAQWSAIQSLPGLQSGLGQLYPSILYNLTQHVNSATPTTSETSAAAISPPLKDSPSPSDLTGEQPLDLSSKPSPNSSIGGDARHVRAKPRVTPCTGRRTYTEEELNSALQDIMSGRLGTRRAAVQYNIPRSTLRNKVYKISSGVKRETPTSMRHLASLEDLADADDDKQDLSADEEDSSGDKILSNSLASHGGDDLASRFADATLAASIQKICAEQNSLTAQQQQQQQQQQHHQPHSDHQVHNKPTTSLESQPKRKSATPQPPPPQTSPIGQNAWQNVLLQSLLISSGLPIQQNFEETLQLFNALLMKQDPSLINPQLLMQLQQSQQSPQSAQQQQQHHHHHHHQQQQNQQHHHLHSNAAGNASAAAAAAAAASFQNRQPKSETPETASSVDLNETLVDDPSVILKIPSYKPVAGSSTSSTSAAAAVAAALCNNKNGENLPSSSPKMPTAANLLGANTSTQQLHHHHHLHQHHNSAIASANNIPGISPPLLRHTSGESQSPPTLSLRDVIANSISRTFSQQANKDNTSPSPAHSSSSAMDHNDQYKRPSISVIKNIGGTDTSRFATAPNLLGGHHANSNHHHHQHHHHQHHSQNAANNNLAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPPLDDRTGGSTSGGNTSGSSANTSKNSNIPGLSAVNSLDKLSKGSGAAGTNVNQKQSAAGKSNPPFPTTSPNGMKIPSALFEPNLAAQLQYPPHLFWHGGFGPLQMDFSPRSQAAAAVAAAAAASSGPGNPSFAANAEFLKSQMLQRFHEERGPTNAIGSPPAPASISNSTSSTNNAKSVRDIAENLYDPGSANGSFLDGIIRKTLDRNNSDIALLDQLAKNSKPPQPRLMMNNDRSPVDLLKLKRSASPMQYHSPMDIKRERASPTSDSSNSDSERNHQRDTDSEPLPPQSQHHAVGLHHALLGASSDLNGAQHGTSSENNLPTSLSASSSSAVTTSILHEKLGQIKSEAEDSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223304;
- 90% Identity
- iTF_00314185;
- 80% Identity
- -