Cvar014515.1
Basic Information
- Insect
- Cheilosia variabilis
- Gene Symbol
- ct
- Assembly
- GCA_951230905.1
- Location
- OX579677.1:539530-553373[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-26 1.8e-22 80.0 0.0 3 71 501 570 499 576 0.94 2 3 4.4e-32 7.1e-28 97.3 0.0 3 77 937 1012 935 1014 0.96 3 3 5.7e-31 9.3e-27 93.7 0.0 3 77 1150 1225 1148 1227 0.96
Sequence Information
- Coding Sequence
- ATGGCGAcaatTAAAGCACTTATCGACGAGGTTAACCGACTGCAAGCCCTCCAAGAAACCCACATTGTACAAATACAAAGACTTGAAGATAATCTGGAGGCGAAGCGTCAACACATTCTGAGACTGGAGGATCGCCTGGAGAAGCAGCAGTTCCCCGCAGTGCCGCAGAAACCAAGTCCGGACCTGTACCGGGAGGATGGCGAGCAGTATGCGGCATCAGCTGCTGCGGCCGAGCCGCCACCAACAGCTCTGCCGGACGAGGTGGTCCACATCAAGACGGAAACTCAAccgccaacaacaacaacaacaacaacaccaacaatcGACATCACGGCTGCAGCGAACGAGCCCAAGCAGTTCCAGGAACTTTTGCTCGAGCGAACAAAGGCGCTGGCGGCCGCTGCCCAGACCTCCAGCGAGGCGACACTGAAAGCCGAAGGAAGTTGCAGTGATTCGATTGCAGGGGAGACCTGCAATGAGCCGCCTGCAGCCTGCGTGGTCCTTGATAGCGACCCGAACGACTCGAATCAGCAGCAACAGGAGGCGAGACCACCATCGGAAGCGGGGTCGGTCGAGCAAGTTGCGTCGTCGAACTTCGCAAGTGTCGATCAGTTTGGTTCGCTGCTGGGCGGTGAGCTGGTGAACTCGTACTGGCGTCGTGGCTTTGATTTGTCTGCGGAACTTAAGTTGCCGCCGCCACCGCATCACCTGCCGTTAGAGCCACCACTTGTGATGCCAACGCAACAGCCGTCGCCGGCAGTAGCCGCCGTTTCGATAGCACACCCACCACCGCCGCAGCTACCATCAATAGCCACGACAAATCCAAGCTCTAAAACGCCAACatcgattttccaaaatttcTCATCAATCCTCTCGTGCCGATCGCCTCCACCACTCTCGATGGCCGCTGCTGGACCATCAACCACCACTCTCTTGAGTCAGCTAGTCAATTCAACCTTCTCATCCAATTCAACTCCTTCTCTTCGAACAGATAACCATCCttcgttgttgtcgtcgtcatcgtcgtcgacCGCAACCACGGGCGCCCACCTGCAGCAGTCCTCACagcaccaccatcaccaccaccacctccatCATCAGCACCCACTTCAGCATCAGCATCCTGCCCTACAACATCAACAGCACCAGGACTACGAGAAGGCAAACAGCCATCACGACTCGTCGTCAACGGCGAGCACGCCCAATCTGCAGGACCAGCGCTCCAACGACGGCCACATAAACGGCGCCAAATCGGCCAAGGCAGCCCTAGAGGACAACAACAACTCGTTGGGCTCGTTGGCACATTTGCCGCCAGCATTCCTGCCAGGCCTGCCATTCCAATTCCAAGATCGCGGCCATTTCCGTTTCGCCGAAGACATCCAACTGCCGCCCGGCGCCTCGATGGCCGGCCGACTCGGAGAGTCGCTCATACCCAAGGGCGACCCGATGGAGGCCAAGCTCCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAATCAAAGTCTCGACACACTTCACATATCACGCCGGGTGCGCGAACTCCTCTCCGTGCACAACATCGGACAGAGGCTCTTCGCCAAGTACATCCTCGGACTGTCGCAGGGCACCGTCTCCGAACTGCTGTCCAAGCCAAAGCCCTGggataaattgactgagaaAGGCCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGCTCCTAAAGTCGCTGATACCAAAAAAAGACTCGGGCATGCCGCAGTACGGGCGCAATGAGGACTCGATGTCGGACGACCGCATTGCACACATCTTGAACGAAGCTTCCAGCCTTATGAAGACCCCTCAGGGACCAGGTGCACAGCTGCAGCAGCAGCTGCAGCACGAGGCGCAGCGTCAGCACCAGCAACAGCACTCGTCCTCGCTGGACGACTCGCAGCACAGCAACGAGGACTCCAAGTCGCCGCATGCGTCGTGCACTTCGCCGTTCTACAAGGAATCACcagtgcagcagcagcagcagcagcaacagcagcaacagcagcaacagcaacagcagcagcagctgctgcGACGCGACGAGGCACAGCGGCGGAGCGTGAAGCCCGACGAGATGTCCCAGGACAAGATGGCGCGGATATATCAAGAGGAGCTGGCAAAACTGATGACGCGCACACCACGCGACACGTTTCCAAGTTTTCTGTTTCCACACTTTTTCAGTGCGGCTGGTGGCCTGCCGCCCGCCAACAGTGCGATGCCACCCGACGACAACATTCGCATGGCCTTCGAGGCCTACCACCGCGAGATGGCCAAGCTGCAGCAGAACAACAGCGGCAACATGCCCAACTTCCCGAACTTCTCCAGCCTGATGGCCCTGCAGCAACAGGTGCTGAACGGCGCACAGGATCTGTCCGTGCCGAAGGAGAACGAAATGAAGTTGAACGGGCAGCGCAACTCCATGGAGAACTGCGATATGAATCAAACCAAAGAAGCCAACGACGAGGCCGTTCTGCGTCACTCAAGTGCATTTAGCTTAGTTCGGAACAAACCGGACACCACACCAGCACCGAGCTCCAACTCGAACCCCAACACAAACTCGGCCGCTCCCAGTCCACTCAGCAACTCGATTCTGCAGCCGGCTATGACGCCGACTGAGGACTTCTCGACAGCGGCCAGCCCACTGCAGCGAATGGCGTCGATCACCAACTCCCTGATCACGCAGCCGCCGGTGACGCCTCACCACACCCAGCCGCAGAGGCCCACGAAGGCCGTGCTGCCGCCCATCACCCAGCAGCAGTTCGACATGTTCAACAACTTGAACACAGAGGACATTGTGCGCCGAGTGAAAGAAGCCCTTTCGCAGTACTCCATCAGCCAGAGGCTGTTCGGAGAGTCAGTTCTGGGGCTGTCGCAGGGATCCGTGTCGGATCTGCTCGCAAGGCCCAAGCCCTGGCACATGCTGACCCAGAAGGGCCGTGAGCCATTCATTCGCATGAAGATGTTCCTCGAGGACGACAACGCCGTGCACAAGCTGGTGGCCAGCCAGTACAAGATTGCGCCCGAGAAGCTGATGCGCACCGGCAGTTACAGCGGCAGCCCGCAAATACCCCAGGGCCTTGCCAATAAGATGAACAGCATTCCAATGCAGAAGATGATGAACGAGCTGAAGATGCAGGAGCCACAGGCGCAGCATATCATGCAGCAGATGCAGGCTGCGTCCGCGATGGCAGCCGCCGCCGCTGCCGGCCACATGCAAAACGCCCAGCACCAGGGCATGCTGCTCACCACTCCCGGACTTCCGCCACAGCACGCCATAAGCCTGCAGCAAGCCGCCAACGAGAAGAAGCCCATGATGATGCCAATTCACTCGCCGCATCAAGCCAATGTCATGCGGAGCAGCATGCACCAGCACATGTCGCCGACGGTCTACGAGATGGCCGCCCTCACGCAAGACCTCGACACGCAGGTGATCACAACCAAGATAAAGGAGGCCCTGCTGGCCAACAACATCGGCCAAAAGATCTTCGGCGAGGCGGTGTTGGGCTTGTCGCAGGGCTCCGTCTCGGAGCTGCTCTCGAAGCCGAAGCCCTGGCACATGCTCAGCATTAAGGGCCGCGAGCCCTTCATCCGCATGCAGCTGTGGCTTTCCGATGCCAACAACGTCGAGCGGTTGCAGGTACTTAAGAACGAACGCCGCGAGGCCAGCAAACGTCGGCGCTCCACGGGCCCCAACCAGCAGGACAACAGCTCCGACACCAGCAGCAACGACACCGCCGACTTCTACACCAGCAGTCCCGGACCGGGTTCGGTCGGTTCCGTGGGCGCACCGCCCAACAAAAAGCAACGCGTCCTCTTCTCCGAGGAGCAAAAGGAAGCCCTGCGCCTGGCATTTGCTCTCGACCCGTATCCCAATGTGGGCACGATTGAGTTTCTCGCCAACGAACTGGGCCTGGTAACGCGCACCATCACCAACTGGTTCCACAACCACCGAATGCGCCTCAAGCAACAGGTGCCGCACGGCCAGCCCACGGAACCGGTGCCCAGTCGAGAGAACACCAACGGAACCCCCTTCGATCCCGTCCAATTCCGTATACTCCTCAATCAAAGACTGATGGAATTGCAGAAAGAGCGCATGGGACTTAGCGGCGCACCGATCCCCTACCCACCGTACTTCGCCGCCAACCCGAACCTCGCAGCACTCATCGGTCGCGGTCTCCTCCCCGGCGGCGGCGAGCCCGATCTGCAGGCCCTCAACAACGCCTTCAAGGAACAAATGAGCGGCCTCGATCTGTCCCTCAAGCGGGAGCGCGACGACGACTTCGAGGACGACGGCGAGGGCGACAGCCACCTGTCCGACAACGAGTCCATCAACGGCAGCGACGAAAAGTCCGAAATGAGCGAAACACCCCGCTCCTCCCTGTCCGGAACCGGCATGCAATCGCGAACATCCAGGCGCAAGCCTGCCGCCCCCCAATGGGTCAACCCCGACTGGCAGGGCGACGGCAAATCCGGCGGACTAATGCCGCCAATGCCCATCGGCGCCACCGACAAAGAGGTCATCATCAACGGCGTCTGCGTCATGCAGCAGCAGGCTGCCGACTACAGTCGCAAATCGACCAACgcagacgacgacgacgacgacgatgacgccTCCGATGCCAACGACGACGAACCATCTGCCCATCACCGCACACAGTCATCGGACTGCGACGACCCACCCGCCGACATCGATCAGCGATTCATGGAGCCCGAGGTCCGAATCAAGCAAGAGGAAGACTGCGACAGCAACGACAGCCATCAGGACGATCACGATTCCGACCCCAGGAAGCCCCCACACCACCGGGACGACGAGGACGACACCCCCGGCGCTTGGAACTACTAA
- Protein Sequence
- MATIKALIDEVNRLQALQETHIVQIQRLEDNLEAKRQHILRLEDRLEKQQFPAVPQKPSPDLYREDGEQYAASAAAAEPPPTALPDEVVHIKTETQPPTTTTTTTPTIDITAAANEPKQFQELLLERTKALAAAAQTSSEATLKAEGSCSDSIAGETCNEPPAACVVLDSDPNDSNQQQQEARPPSEAGSVEQVASSNFASVDQFGSLLGGELVNSYWRRGFDLSAELKLPPPPHHLPLEPPLVMPTQQPSPAVAAVSIAHPPPPQLPSIATTNPSSKTPTSIFQNFSSILSCRSPPPLSMAAAGPSTTTLLSQLVNSTFSSNSTPSLRTDNHPSLLSSSSSSTATTGAHLQQSSQHHHHHHHLHHQHPLQHQHPALQHQQHQDYEKANSHHDSSSTASTPNLQDQRSNDGHINGAKSAKAALEDNNNSLGSLAHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGMPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPGAQLQQQLQHEAQRQHQQQHSSSLDDSQHSNEDSKSPHASCTSPFYKESPVQQQQQQQQQQQQQQQQQQQLLRRDEAQRRSVKPDEMSQDKMARIYQEELAKLMTRTPRDTFPSFLFPHFFSAAGGLPPANSAMPPDDNIRMAFEAYHREMAKLQQNNSGNMPNFPNFSSLMALQQQVLNGAQDLSVPKENEMKLNGQRNSMENCDMNQTKEANDEAVLRHSSAFSLVRNKPDTTPAPSSNSNPNTNSAAPSPLSNSILQPAMTPTEDFSTAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNELKMQEPQAQHIMQQMQAASAMAAAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAANEKKPMMMPIHSPHQANVMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLVTRTITNWFHNHRMRLKQQVPHGQPTEPVPSRENTNGTPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALIGRGLLPGGGEPDLQALNNAFKEQMSGLDLSLKRERDDDFEDDGEGDSHLSDNESINGSDEKSEMSETPRSSLSGTGMQSRTSRRKPAAPQWVNPDWQGDGKSGGLMPPMPIGATDKEVIINGVCVMQQQAADYSRKSTNADDDDDDDDASDANDDEPSAHHRTQSSDCDDPPADIDQRFMEPEVRIKQEEDCDSNDSHQDDHDSDPRKPPHHRDDEDDTPGAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00976241;
- 90% Identity
- iTF_00314056;
- 80% Identity
- iTF_00315045;