Cvar028014.1
Basic Information
- Insect
- Cheilosia variabilis
- Gene Symbol
- kn
- Assembly
- GCA_951230905.1
- Location
- OX579680.1:40898417-40925826[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-51 2.6e-47 162.3 0.0 10 136 142 255 134 304 0.82
Sequence Information
- Coding Sequence
- ATGACAACTCTGCTGCCTCTGCTGGCTTTGCACTGCCTGTCTGCTTTGGCGTACTGTCGCATCGCATCTCTTGTGCCGGGATCGGGAATACGGCTTCAGCACTGTGAAtggtcgtcgtcgttgtctGCACATTGGTGGTTCGGTCGGTTGTGTTGTAACGCAGCAGCAGGGATTCAGTTGGGGTTTAACAGTCACTCGGGACGAACACTCTCGCATCTATTTTTCGTGAACGGTACGACGAACTGCTTCAAGCTGCGTTCCGACGAGCCGGTGCCGGGCTTTAGCTCGGCTTCGCCATGGCCAACACTGGAATTGGAATGGGGGCGCAAGCTGTACCCAACGACGGGTCCACGATCGGCCAGCGGGTTGATGTTCGGTCTACCACCAACAGGAGCCGATCTAAATCAGCCCCGAGGGCCAATGACGTCTCTCAAAGAGGAGCCGCTCGGTGCAAGAGCGTGGATGCAACCAGTCGATCAGACTAACCTTGGTATCGGTCGCGCCCACTTCGAGAAACAGCCCCCCAGCAACCTGCGTAAGTCGAACTTTTTCCACTTTGTGATTGCGCTTTACGATCGGGCCGGTCAACCTATCGAAATCGAACGAACGGCATTCATCGGTTTCATCGAAAAGGACTCGGAGTCGGATACGACAAAGACAAATAATGGCATTCAATACCGATTGCAGCTCTTATACGCGAATGgTGCCCGACAAGAACAGGACATTTTTGTGCGTCTCATCGATTCGGTGACTAAGCAGGTAAGTTTCACTGGCAATGcaattttcacaaaattcaCCAAAGATAAGGAGAGAGAAATGCGAAAAATGGGCGTGAAGGACATTCTTGCACACAGCATTTTAGCTACCCTTGGGGTGCATTACTCGTACATCGGTATCGGGAACATAAGTCCCATTCAAAATTGA
- Protein Sequence
- MTTLLPLLALHCLSALAYCRIASLVPGSGIRLQHCEWSSSLSAHWWFGRLCCNAAAGIQLGFNSHSGRTLSHLFFVNGTTNCFKLRSDEPVPGFSSASPWPTLELEWGRKLYPTTGPRSASGLMFGLPPTGADLNQPRGPMTSLKEEPLGARAWMQPVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDTTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQVSFTGNAIFTKFTKDKEREMRKMGVKDILAHSILATLGVHYSYIGIGNISPIQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -