Cvar028018.1
Basic Information
- Insect
- Cheilosia variabilis
- Gene Symbol
- kn
- Assembly
- GCA_951230905.1
- Location
- OX579680.1:41001065-41011277[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-119 2.9e-115 386.6 0.0 205 385 1 210 1 212 0.99 2 2 4e-11 3.3e-07 29.9 10.9 422 508 213 302 209 315 0.81
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAGGTTGTGATATCAACACAGGTGGCCGTCGATGGGCCACTATTGGCTATTTCCGATAACATGTTTGTGCATAATAACTCGAAACATGGTCGTCGCGCAAAACGGATGGACGCCACGGAAGGTACAGGAAATTCTCCCCTGTCCATTTCGGGTCACCCCCTTGCGCCTGACAGTACCTACGATGGACTCTATCCTCCACTACCAGTAGCAACGCCATGCATAAAAGCGATATCTCCCAGTGAAGGTTGGACAACTGGCGGAGCCACTGTGATTATTGTCGGTGATAATTTCTTCGATGGCCTCCAGGTAGTCTTCGGTACAATGTTAGTTTGGAGTGAGTTAATAACATCACATGCTATACGGGTCCAAACACCACCGCGCCACATACCCGGCGTAGTAGAAGTGACACTCTCCTACAAGAGTAAGCAATTTTGCAAGGGCTCTCCCGGACGATTTGTCTATGTTTCAGCCCTCAATGAACCGACGATAGATTATGGCTTCCAGCGACTGCAAAAACTGATCCCACGTCACCCGGGTGATCCCGAGAAACTACAAAAAGAGATCATCCTTAAACGTGCCGCAGATTTGGTTGAGGCTCTTTACTCAATGCCGAGATCTCCCGGAGGAACGACTGGATTCAATTCATATGCCGGCCAATTGGCCGTCAGTGTTCAGGATGGAACCGGTCAATGGACCGAAGATGAATACCAGCGAGCCCAAAGCAGTAGTGTGAGTCCACGTGGCGGCTACTGCAGCAGTGCATCGACGCCGCACTCATCGGGCGGATCCTATGGGGCCACTGCTAACGGCTATGGACCGGCACCGAACATGGGAGCATTGTCATCGTCGCCGGGCAGTGTATTCAATTCAACATCAATGTCGTCCCCCTGGCATCAAGCACTAGTTcaacatcatcaccatcatcactCGCATCCGCATCCGCACCATCACCATTCACATCATCCACATCAGCCGTGGCATAATCCGACAACGGTATCAGCAACAgcagctgtttaa
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRMDATEGTGNSPLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGTTGFNSYAGQLAVSVQDGTGQWTEDEYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATANGYGPAPNMGALSSSPGSVFNSTSMSSPWHQALVQHHHHHHSHPHPHHHHSHHPHQPWHNPTTVSATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01116233;
- 90% Identity
- iTF_00893648;
- 80% Identity
- -