Cvar027918.1
Basic Information
- Insect
- Cheilosia variabilis
- Gene Symbol
- HLF
- Assembly
- GCA_951230905.1
- Location
- OX579680.1:38016986-38019263[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.3 1.3e+04 -2.9 0.0 28 41 63 76 61 78 0.67 2 3 4.9 8.8e+03 -2.4 0.1 38 45 85 92 80 94 0.74 3 3 1.9e-13 3.4e-10 40.6 8.8 1 62 151 212 151 214 0.97
Sequence Information
- Coding Sequence
- ATGTGCAACAGTGCGGTGCATCGTCCGTTTAACGGAATCGTTGACCCATTTTCGTTTTCAACTTTTCATTTACTAAGAACCTGTAATCGCCTTATGCTGCCAACAGATGCCCAAAATTACTACAGCCTAATGAAGGACAACACTTTTCCGCATGTTAGTCCGCTAAAGTCACCACCTATGGATCAAAAGGAACTACAGTCGCAACCGCCGGATTTGCTGTGCAAAAACATGGGTGGAGCATTTCCACAAAAACAACCCGAAAATGAAAAGCTGCAGACTTCATTGCCACCCGTTTTAAGCATCGTTAGCAACACTGGAAGTTGCTCCCCGATAGGCTATGAATATAGTCCCGCAGAGTATTCCCTATCCGATATGAACCGCTCTGGAGTATTTTCTGCATTTATGCAACGAAGACCCCGTGGAGAGAAACGACCAATTCCCGACGAACAGAAAGACGAAAAATACTACGAACGTCGAAAGCGTAACAATGAAGCGGCGAAGAAATCGCGAGATGCTAGGAAAATTCGCGAGGATCGAATAGCCTTTAGAGCAGCCCTATTGGAACAAGAGAACTCCATTCTGCGAGCGCAAATAGTTGGCCTGAGAAATGAGCTGCAGACAGTGCGACAAATGCTAGCAAACGGAACTGGAAACAGACAGCCATAG
- Protein Sequence
- MCNSAVHRPFNGIVDPFSFSTFHLLRTCNRLMLPTDAQNYYSLMKDNTFPHVSPLKSPPMDQKELQSQPPDLLCKNMGGAFPQKQPENEKLQTSLPPVLSIVSNTGSCSPIGYEYSPAEYSLSDMNRSGVFSAFMQRRPRGEKRPIPDEQKDEKYYERRKRNNEAAKKSRDARKIREDRIAFRAALLEQENSILRAQIVGLRNELQTVRQMLANGTGNRQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01541911;
- 90% Identity
- iTF_00312343;
- 80% Identity
- -