Cvar006028.1
Basic Information
- Insect
- Cheilosia variabilis
- Gene Symbol
- cnc
- Assembly
- GCA_951230905.1
- Location
- OX579676.1:75084843-75095265[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-15 2.3e-12 47.6 5.7 3 54 383 434 381 445 0.88
Sequence Information
- Coding Sequence
- ATGGCGAAAAGTGGAGGCACAACTCTCAAAGAGCTGTCGGAGTTGCGAACCACTGATGATGGAATGATGAAACCTGTACCACTAGCAGCAAGCGGGTTAACAGCATCATTAATTGTAGGCTGGTTACTAAAAATGGACACTGAGGGTGACGTGGATGGTACAGATGGTAAAGATGTAGACGATTTGTCTAATGAGACTTCCACACTGGCAATGACAACTGATGGTACAGGTGGAAAAGATGTAGACGATTTGTCCAATGAGACTTCAACACAGGGAATTACAACTGAAGTGGTTGAGTTAGACCGCAAAATCCTTTTTGGATCCCCAACGTGCAACCAAGATGCTATTTTACCATTGGAAAATTCTGAAAGAGTGGCATCTCAAACAACAGATAAATCAATTGATAATACCAATTCTTTGTGTGGTAACAGCATAGCAGAACGATTGGATTTGTCTTGCGATAGTGCAGTGAGCTCATTGGGTTCCGAGAGAGTTCCATCAACGTCGGACGGCGAATGGGGTGAAGGAAGCGACTCAGGACAGGACTACCATCAAAATACCTACTATGGCCCCTATGACTATAGCTCAAGTAGTCGCAATTTTACTGCCCGACAGATGCCGGTTGCTCAGAAAAAGTATCATATGTTTGGTAAACGATATTTTCAAGAGCAGGTATCAGAAACATCTATTATTCATTCAGCTATACAGTTCTTACACTCTACTAATTCTGTCAACGAATGCGGTGGGAttgaaaatattgttgataACACAGCTTTTGATGACTGTACTGATGAAATGCTACCTCTTTCAAACGTTAAGGACACTAGTAAATTAACTCATTCTATTGTAAAAACAGAACGAGATAAATTTGAAGAAAATGCAATAGCTTCTCAAACTAACCATGAAAACCCATCTCGGCACAATCATACATATGCAGTAATAAACGAAACAGCCGCAAATTCTCGTTTTTTTCGTGATAATTCAGACTGCAATGATATTATATCTGATGGACATTTAACACGTGATGAAAAACGAGCTCGTAATCTGAATGTACCTATTCCTGTTCCAGATATAATAAATCTGCCAATGGATGAATTTAATGAACGTATTTCTAAGTTTGATCTTACCGAAAGTCAACTGTCGCTAATACGAGATATaagaagaagaggaaaaaataaagtagctGCGCAAAATTGCCGTAAAAGAAAACTCGACCAAATTCTTTCTCTAGAAGACGATGTTAAAGAAGTTCGTCGCCGGAAAGAAAAGTTACATAATGATAGAGCATTTATAGCAACGGAGAAGAAAAGAATCGCAAACAAATTTGCCGTGTTACATCAACACATATTTCACttcTTGCGAGATGCCGAAGGAAATCCTTGTTCACCTTCCAAGTACAGTTTGCAGCAATCCTCAGATGGATCTATATATCTTTTGCCGAGGGATAGTTCAAAACgtgatcccaattttcatatgTCAATTTTAATCAGTGCGAGTGAAACTAGTTCTTGTGGTTTTGGCCGCCAAAGAAGGACGCAGCAAACTCACGTTCGAGAAAATTTAAGCGAGTCCCCTTCAGTAACTTCGGGCCAACCGCCAAATAATATTGAGCACCTGGAAGACTAA
- Protein Sequence
- MAKSGGTTLKELSELRTTDDGMMKPVPLAASGLTASLIVGWLLKMDTEGDVDGTDGKDVDDLSNETSTLAMTTDGTGGKDVDDLSNETSTQGITTEVVELDRKILFGSPTCNQDAILPLENSERVASQTTDKSIDNTNSLCGNSIAERLDLSCDSAVSSLGSERVPSTSDGEWGEGSDSGQDYHQNTYYGPYDYSSSSRNFTARQMPVAQKKYHMFGKRYFQEQVSETSIIHSAIQFLHSTNSVNECGGIENIVDNTAFDDCTDEMLPLSNVKDTSKLTHSIVKTERDKFEENAIASQTNHENPSRHNHTYAVINETAANSRFFRDNSDCNDIISDGHLTRDEKRARNLNVPIPVPDIINLPMDEFNERISKFDLTESQLSLIRDIRRRGKNKVAAQNCRKRKLDQILSLEDDVKEVRRRKEKLHNDRAFIATEKKRIANKFAVLHQHIFHFLRDAEGNPCSPSKYSLQQSSDGSIYLLPRDSSKRDPNFHMSILISASETSSCGFGRQRRTQQTHVRENLSESPSVTSGQPPNNIEHLED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00315690;
- 90% Identity
- -
- 80% Identity
- -