Basic Information

Insect: Cheilosia urbana
Gene Symbol: -
Assembly: GCA_946477595.1
Location: CAMLCJ010000004.1:1495958-1518892[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0075 1.3 10.9 0.1 2 23 259 281 258 281 0.93

2 12 0.11 19 7.2 3.2 1 23 290 313 290 313 0.97

3 12 8.7e-05 0.015 17.0 3.0 2 21 320 339 320 340 0.94

4 12 3.5 5.8e+02 2.5 0.1 2 23 382 403 381 403 0.94

5 12 2.7 4.6e+02 2.9 0.1 2 20 407 425 406 428 0.81

6 12 0.00085 0.14 13.9 0.2 1 23 434 456 434 456 0.97

7 12 0.85 1.4e+02 4.4 3.9 1 23 1691 1716 1691 1716 0.93

8 12 0.0016 0.28 13.0 0.3 2 23 1724 1745 1723 1745 0.97

9 12 8.6e-05 0.014 17.0 1.1 1 23 1750 1772 1750 1772 0.99

10 12 2.6e-06 0.00043 21.8 0.6 1 23 1778 1800 1778 1800 0.99

11 12 6.9e-05 0.012 17.3 0.6 1 23 1806 1828 1806 1828 0.98

12 12 0.056 9.4 8.2 0.2 2 14 1835 1847 1834 1851 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0075	1.3	10.9	0.1	2	23	259	281	258	281	0.93
2	12	0.11	19	7.2	3.2	1	23	290	313	290	313	0.97
3	12	8.7e-05	0.015	17.0	3.0	2	21	320	339	320	340	0.94
4	12	3.5	5.8e+02	2.5	0.1	2	23	382	403	381	403	0.94
5	12	2.7	4.6e+02	2.9	0.1	2	20	407	425	406	428	0.81
6	12	0.00085	0.14	13.9	0.2	1	23	434	456	434	456	0.97
7	12	0.85	1.4e+02	4.4	3.9	1	23	1691	1716	1691	1716	0.93
8	12	0.0016	0.28	13.0	0.3	2	23	1724	1745	1723	1745	0.97
9	12	8.6e-05	0.014	17.0	1.1	1	23	1750	1772	1750	1772	0.99
10	12	2.6e-06	0.00043	21.8	0.6	1	23	1778	1800	1778	1800	0.99
11	12	6.9e-05	0.012	17.3	0.6	1	23	1806	1828	1806	1828	0.98
12	12	0.056	9.4	8.2	0.2	2	14	1835	1847	1834	1851	0.84

Sequence Information

Coding Sequence: ATGTCACGGCTGTGTTGTGTCGCAGACTGCAATTCTATCATAAGTGGACCTCAAGGTGTTCGGAGCTTTGCGTTTCCTAAAGATGAGCAAATGCAAACGAAGTGGAAGACCATCATCCGACGAGGTGATATGGAATTGACTGAAAATACTCATGTGTGTTGGTTTCACTTTGCCGAAGAAGATATTATAAAAAGATATCCATATGGCGGGCATAGGAAAAAGTGGTTGTTAAAACCAACTGCAGTTCCGacgttatttgaaagaacagaaCTTAAACCACGAAATGTTCTATATAGTGTTGAAGATTTGCAAGACAGAGATATCGGAAACCTGTGCAATAACTACCTCTTGCAATCGCTTATTCAATTTTCTGGGAACACCTTTGATCGAAAATCAAAAACTGAGGAAGTTTTTATTCAAATATGTCGTACATGCCTCTGTGAGACTGCAGACAATGATTTGGAAAGCAATATGTTGCTTCCTGTCAGCAGCTATATAAGCACGGTAACAATtcaagaaataattgaaaatctAACTGGAATAAAGATTAATATGGAAGATAAATTGCCTCATCACATATGCAACACCTGTCTAAAAGCTATAGAGGCAGCCCATGACTTTCGTACTCGTAGCCAGCAAGCGGATCGAGTTTTAAGAAGTTTGATTCCATCAGAAGAGAATGCAATAACTTCAGACAACTCTATAGTGGAAGTGGGTTCCCTAAAATCAGAACAGAAAGACGACTTTGATGGTCCCTCAACAGTTGCTAGTATTGAATGCAATCTGTGCAATACGATATTATCGGACAATACGGAACTGGAAAACCATATGGCTGAGAAACACCCAACACGTAGTAAGGGGAAGGTTTTTAAATGTGGGCTCTGTACTAAGGAGTACCATTTTCGAAATGCGCTGCATGATCATATGATTGTCACTCATATACAGAAAAGGGAGCCGAAGTGCACGATCTGCTTTAAAAAATTCCGATCGAACTCAAATTTGGAGAGGCACAAGAAAAAAGTTTGCGTTCCTCCAGATGCAGTGACGTGTAGACTGAAGAATGGGCCAGCTactgttaaattaaattacttCAAAGATAAAGAAAATCCGGAAGAAGCGatacaaattgaaattactAACATATCGTGTTCTTTGTGTGATGATagTTTTGAATTGGAAGTCGATTTTCTCAACCATCTTTCGTTGCACAAATCGAAACAATGCCCGTTGTGTAAGAACGTCTTCAGTCAAGTTATTGTCTTGGAGGGTCATTTATGGACCCACGGCTCTGAAACGCCCTTTGTATGCCCCCTGTGTTCGAGAGGCTTAAAAACTATTTCAGGACTGCGACGCCATATCAAAGACCACGCCAAAAGAAAAGATTACGATATAACATCCACAGCTTTTCACGACCCCGAATCAAATGATGGAATATCTTCTGAACTAATGAAACCAGAGATCTACGTTGACTGCATTATTAAGGAGGAATCCGACCTGGACATAGTTGCATCAACTAGCAAGTCTACGATGTCGGGCTGGTCTAACGTGAATACTGATGGGAGTGAAGTGGCCGCGAGCAGTTTGCACAGTTCAGAAATGAAGCCTGCCTGTTTATCGAACAGTTCTATTAAGCAAGAGACAATAGAAGACGATGAGGCAATGGTCACGATTACCAATGAACCACTGAGTGATAATGAACCACAATCGTTTGATCAGCCCAAACAAAACTCAATTGAATATCAGCCAGTTGGTTGCGACAGGTTCGCTTGTGCTGTTTCAGATTGCAAACTGATTGATATGGACGACAAGTTGCCCCATCATATTTGCCCCACTTGCATGCAGGCTGTGGACGCGGCCTATTCCTTTCGCCTTCACAGCCAGGAAATTGATGAAGTTCTAAAAGTTTTACTCCCCACAGAAATAGATTGCATCGCGGGAGACCTCACTGCTCGGTTGGTTTCAACCAATTCTGAAAAAGCAGAGGACTTACAAGTACAACAAGAGTTGAATAACAGTGGCAGCCAGCAAATTGATGATGATCCAAAATCGTTCGTTCCAAGAGAAGGTGACGTTAATAACACAGAACTAGATAGCACCACAGGAGAACTTACAGCTCAGTTGGTTCCTACCAATTCTGAGCAAACAGAGGACAttcatttcaatcaaaaatttaTTGGCAATGGGAACCAGGAAATTTATGTTCCAAAATCGTTCCTTCCAAGAGAACTTCCAAGAGAAGGTGATGTAAATAATACAGAACTAGATAACACCACAGGAGAATTTACAGCTCAGTTGGTTCCTACCAACTCTGAACAAACAGAGGACActcatttcaatcaaaaatttaATGACAGTGGGAGCCAAGAAGTTTATGATGTTTCAAAATCATTCCTTCCAAGAGAAGGTGATGTAAATAATTCAGAACTCGATAACACCACAGGAAAATTTACAGCTCAGTTGGTTCCAACCAATTCTGAACAAACAGAGGACACTCATGtcaatcaaaaatgtaatgACAGTGGGAGCCAAGAAGTTTATGATGTTTCAAAATCATTCCTTCCAAGAGAAGGTGATGTAAATAATTCAGAACTCGATAACACCACAGGAAAATTTACAACTCAGTTGGTTCCAACCAATTCTGAACAAACAGAGGACACTCATGtcaatcaaaaatgtaatgACAGTGGGAGCCAAGAAGTTTATGATGTTTCAAAATCATTCCTTCCAAGAGAAGGTGATGTAAATAATACAGAACTCGATAACACCACAGGAAAATTTACAGCTCAGTTGGTTCCAACCAATTCTGAACAAACAGAGGACACTCATGtcaatcaaaaatgtaatgACAGTGGGAGCCAAGAAGTTTATGATGTTTCAAAATCATTCCTTCCAAGAGAAGGTGATGTAAATAATTCAGAACTCGATAACACCACAGGAAAATTTACAGCTCAGTTGGTTCCAACCAATTCTGAACAAACAGAGGACACTCATGtcaatcaaaaatgtaatgACAGTGGGAGCCAAGAAGTGTATGATGTTTCAAAATCATTCCTTCCAAGAGAAGGTGATGTAAATAATTCAGAACTCGATAACACCACAGGAAAATTTACAGCTCAGTTGGTTCCAACCAATTCTGAACAAACAGAGGACACTCATGtcaatcaaaaatgtaatgACAGTGGGAGCCAAGAAGTTTATGATGTTTCAAAATCATTCCTTCCAAGAGAAGGTGATGTAAATAATTCAGAACTCGATAACACCACAGGAAAATTTACAGCTCAGTTGGTTCCAACCAATTCTGAACAAACAGAGGACACTCATGtcaatcaaaaatgtaatgACAGTGGAAGCCAAGAAGTTGATGATGTTTCAAAATCGTTCCTTCCGAGAGAAGGTGATGTAAGTAATACAGAACCAGATAACACAACAGGAGAATTTACAGCTCAGTTGGTTGCAACAAATTCTGAACAAACAGAGGACACTCATGtcaatcaaaaatgtaatgACAGTGAAAGCCAAGAAGTTGATGATGTTTCAAAATCGTTCCTTCTAAGAGAAGGTGATGTAACTAATACAGAACTCGATATCACCACAGGAAAATTTACAGCTCAGTTGGTTCCAACCAATTCTGAACAAACAGAGGACTCTCATGTCAATCAAAAATTTAATGGAAGTGCGTGCCAGGAAATTGATGATGTTTTAAGATATTTCCTACCAAAAGGAAGTGATCAAATAGATAGCATCGCAGGAGAGTTTTCAGATCAGTTGGTTCCAACCAATTCTGAACAAACAAAGTACTTACATGTCAATCAACAATTTAATGACAGTGGGTGCCAAGATATTGATGAAATTTTAAGATCGTTCTTTCCAAGAGAAGGTCCTGTTATTATTACAGAAAAAGATAGCATTGCAGGAGAGTTTTCCGCTCAGTTGGTTCCAACCAATTCTGAACAAACAGAGGGCATGCATGTGAATCAAACATTTAACGAAAGTGGGTGCCAAGATATTGATGAAGTTTTAAGATCGTTCTATCCAAGAGTAGGTGATATTGTTAATACAGAAATAGATAGCACCACAGGAGAACTTACAGCTCAGTTGGTTCAAACCAATTCTGAACACACAGAAGGATTACCTGTCAATCACAAATTTAATGACAATGGGTGCCAGGAAATTGATGATGTCTTAAGATATTTCCTTCCAAATGGAAGTGATCAAATGGATAGCACCGCAGGGGAGTTTTCAGCTCAGTTGGTTCCAGCCAATTCTGAACAAACAAAGTACTTACATGTCAATCAAAAATTTAATGACAGTGGGTGCCAGGAAATTGATGAAGTCTTAAGATCGTTCATTCCAATAGAAAATCCTGTTATTAATACAGGAAGAGATAGCATCGCAGTAGAGTTGGTTCCAACCAATTCTGAACAAACAGAGGGCTTGCATGTGAATCAAACATTTAACGACAGTGGGTGCCAGGAAATTGATGATGTTTTAAGATCGTTCTTTCCAAGCGAAGGTCCTGTTATTAATACCGAAAGAGATAGCAGCGCAGAAGAGTTAACAGCTAAGTTGATCCCAACCGAATCTGAACAAACTGAAGTCTTACAAATCAGTCAGCAAATTAATGATTGTCAGGTGTCTTTTGTTGTAGACTGTGCTACAGCCCCCACCAGTGTCCAAAGCAATCAGTGCAATATGACTAAGCCAAATTATGAACAAGACTCAACCCCGGATGAGTGTGACGAGTACATTTTTGAGGAGGAAGCTAATCTGAGTCCAGTGAATGCCACCGATTTCTCTACTACATCTGAATGGGCCAGTGACTATTTGGAAAACGTAGATGTCCCACCAAGCGCATTAGAAAATCTTTTAGAGGAACCAATTTATCAAGACACTATTTGGCAGCCACCAGCCACCGCCGCGTACAATATCACAATTCAGCAAGAAATAACAGCAGATGGACAGGCGTCATTTAAagttataaatgagccgactatTGAAAACGAAGCTGCACCACCAGATCGGATCGAGCACGATCCAAATGAAGTATTCGGCGCAGAAACTTGCTGCATATTCACCTGTGCACTTGAAAATTGCAGAAGGGAGTTCAAGCGACATGCTGAAATGATCCACCATTATACATCCAAGCATTGCTTTGGACCGTCGCCGATTAAGTGTCCCGTATGTTCCATGGTATTTCCGGGCAAATCGGAAATACACAACCATATAAAATCGCATCTTAAGTGTGAGTACAAGTGTTCGTATTGTCCCAAAACATACTTGGAGTCAAGTGACTTAAATCTACATTTACGCACACATTCCGCCGAACGACCGTATAAATGTCCAAAGTGTCCGAAAATGTTTAAGCGTAGGCCGGACGCAAACGTACACCTAAGAACGCATAGGATATGCAAAGAATATAAGTGCAACGTTTGTGGCAAAGAGTTCTTCTCAACCACCGGTTTGTTGATGCACATGAAGGGGCATGCAGTTATAAAGGAATTACAGTGTCCTCATTGCCACAAACAATTTCCAACCAGGAATCCACTCTTTGCCGTTGCCCTAAGCGGAGTGGCCCCGATCCCGAAGGATCTAGGACAATGCAACTACATTTGCCATGAAAAATCACATGCCTCCGTGTGCGCAACAAATGGAATTTGTTTGAATCGTTTCTCAAGCAACTGTGAACTGCAAATCTACAATTGCATGAAtccacaaaaacaattcaaacaaaTTAACGATCACAAGTGCAACGAGAGCTGGGCACCTATTTGTACCAGTGGAGATTTTCAATAA
Protein Sequence: MSRLCCVADCNSIISGPQGVRSFAFPKDEQMQTKWKTIIRRGDMELTENTHVCWFHFAEEDIIKRYPYGGHRKKWLLKPTAVPTLFERTELKPRNVLYSVEDLQDRDIGNLCNNYLLQSLIQFSGNTFDRKSKTEEVFIQICRTCLCETADNDLESNMLLPVSSYISTVTIQEIIENLTGIKINMEDKLPHHICNTCLKAIEAAHDFRTRSQQADRVLRSLIPSEENAITSDNSIVEVGSLKSEQKDDFDGPSTVASIECNLCNTILSDNTELENHMAEKHPTRSKGKVFKCGLCTKEYHFRNALHDHMIVTHIQKREPKCTICFKKFRSNSNLERHKKKVCVPPDAVTCRLKNGPATVKLNYFKDKENPEEAIQIEITNISCSLCDDSFELEVDFLNHLSLHKSKQCPLCKNVFSQVIVLEGHLWTHGSETPFVCPLCSRGLKTISGLRRHIKDHAKRKDYDITSTAFHDPESNDGISSELMKPEIYVDCIIKEESDLDIVASTSKSTMSGWSNVNTDGSEVAASSLHSSEMKPACLSNSSIKQETIEDDEAMVTITNEPLSDNEPQSFDQPKQNSIEYQPVGCDRFACAVSDCKLIDMDDKLPHHICPTCMQAVDAAYSFRLHSQEIDEVLKVLLPTEIDCIAGDLTARLVSTNSEKAEDLQVQQELNNSGSQQIDDDPKSFVPREGDVNNTELDSTTGELTAQLVPTNSEQTEDIHFNQKFIGNGNQEIYVPKSFLPRELPREGDVNNTELDNTTGEFTAQLVPTNSEQTEDTHFNQKFNDSGSQEVYDVSKSFLPREGDVNNSELDNTTGKFTAQLVPTNSEQTEDTHVNQKCNDSGSQEVYDVSKSFLPREGDVNNSELDNTTGKFTTQLVPTNSEQTEDTHVNQKCNDSGSQEVYDVSKSFLPREGDVNNTELDNTTGKFTAQLVPTNSEQTEDTHVNQKCNDSGSQEVYDVSKSFLPREGDVNNSELDNTTGKFTAQLVPTNSEQTEDTHVNQKCNDSGSQEVYDVSKSFLPREGDVNNSELDNTTGKFTAQLVPTNSEQTEDTHVNQKCNDSGSQEVYDVSKSFLPREGDVNNSELDNTTGKFTAQLVPTNSEQTEDTHVNQKCNDSGSQEVDDVSKSFLPREGDVSNTEPDNTTGEFTAQLVATNSEQTEDTHVNQKCNDSESQEVDDVSKSFLLREGDVTNTELDITTGKFTAQLVPTNSEQTEDSHVNQKFNGSACQEIDDVLRYFLPKGSDQIDSIAGEFSDQLVPTNSEQTKYLHVNQQFNDSGCQDIDEILRSFFPREGPVIITEKDSIAGEFSAQLVPTNSEQTEGMHVNQTFNESGCQDIDEVLRSFYPRVGDIVNTEIDSTTGELTAQLVQTNSEHTEGLPVNHKFNDNGCQEIDDVLRYFLPNGSDQMDSTAGEFSAQLVPANSEQTKYLHVNQKFNDSGCQEIDEVLRSFIPIENPVINTGRDSIAVELVPTNSEQTEGLHVNQTFNDSGCQEIDDVLRSFFPSEGPVINTERDSSAEELTAKLIPTESEQTEVLQISQQINDCQVSFVVDCATAPTSVQSNQCNMTKPNYEQDSTPDECDEYIFEEEANLSPVNATDFSTTSEWASDYLENVDVPPSALENLLEEPIYQDTIWQPPATAAYNITIQQEITADGQASFKVINEPTIENEAAPPDRIEHDPNEVFGAETCCIFTCALENCRREFKRHAEMIHHYTSKHCFGPSPIKCPVCSMVFPGKSEIHNHIKSHLKCEYKCSYCPKTYLESSDLNLHLRTHSAERPYKCPKCPKMFKRRPDANVHLRTHRICKEYKCNVCGKEFFSTTGLLMHMKGHAVIKELQCPHCHKQFPTRNPLFAVALSGVAPIPKDLGQCNYICHEKSHASVCATNGICLNRFSSNCELQIYNCMNPQKQFKQINDHKCNESWAPICTSGDFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00314362;
90% Identity: iTF_00314362;
80% Identity: iTF_00314362;