Curb024716.1
Basic Information
- Insect
- Cheilosia urbana
- Gene Symbol
- ZBTB41
- Assembly
- GCA_946477595.1
- Location
- CAMLCJ010000232.1:764233-776701[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 8.9e-07 0.00015 23.3 1.5 1 23 134 157 134 157 0.98 2 18 0.25 43 6.1 0.2 2 23 314 335 313 335 0.97 3 18 0.00089 0.15 13.8 0.4 1 23 340 363 340 363 0.95 4 18 0.33 56 5.7 2.1 1 23 418 440 418 440 0.97 5 18 0.00023 0.038 15.7 0.1 1 23 446 468 446 468 0.99 6 18 4.9e-05 0.0082 17.8 3.4 1 23 474 496 474 496 0.98 7 18 2.6e-05 0.0043 18.7 4.0 1 23 652 675 652 675 0.93 8 18 4.4 7.4e+02 2.2 6.2 1 23 704 726 704 726 0.98 9 18 0.023 3.8 9.4 2.5 2 23 739 760 738 760 0.95 10 18 0.012 2 10.3 0.3 1 23 766 789 766 789 0.96 11 18 0.0029 0.49 12.2 1.3 1 23 803 825 803 825 0.98 12 18 0.0067 1.1 11.1 2.7 1 23 847 869 847 869 0.97 13 18 3.4e-05 0.0057 18.3 0.5 1 23 875 897 875 897 0.98 14 18 6.5e-06 0.0011 20.6 4.6 1 23 903 925 903 925 0.98 15 18 0.071 12 7.8 5.8 1 21 931 951 931 952 0.88 16 18 3.8 6.5e+02 2.4 0.6 1 8 1145 1152 1145 1167 0.85 17 18 0.17 28 6.7 0.2 1 23 1330 1353 1330 1353 0.95 18 18 7.5e-05 0.013 17.2 1.5 3 23 1372 1393 1371 1393 0.96
Sequence Information
- Coding Sequence
- ATGACTGACATTCGATGTAAAACCTGCTACGAACTAAACGACGAAAATTCGATTAAATGTGAAATATGTAAAGCATCACTTTCTGACACCAACTGTTCCGAAGTGGACGAATGTGAAAATGATTATCGTTTCATTGAAGAAGCTGAATTAAAGGGTCAAGTCTATAAATTAGAAAATCTAAAcgataatatttttttcgagGTCCTACCTGTGGGGGTAGAAAAACACGACATCAAAATAGAAGCGGATGAAAATGTTACCGAATTTTATCGAATTTCAAATCGACCcaatgtaaataataatgaaGTCTTGAATATTAAACCCAGCGAAGTGGTTAGTTCCATAACCATAGAGCCCAGGAAAATTTGCGAAATAGAAATAACACTACCAGAGGCACCTTACACATGTGACCAGTGTTCAAAAAGCTTTAAACGAAAGGCGTCGCTAAACTCACACATAAACAGAGTCCATAACCCTGATGATGATGATCCGAGGGCATATGTTTCCAGTATTCGAACAAAATCGGAACCTAATCGAAATGTGTCTCCCGCTTTCTCAGAATCGTGCGACTCTGAATACGTACCACCGGAAGAAAACCCTCCggacaacaaaaacagaaagcaaacaAAATCGGCGCTCAAAGTCAAGCGGAAACTGGAAGAAACATCGGAAGAGTCGGACGCTGAAAataataactcgaagaaaagaaCGCCAAAGTGTAACAGCACTGTCAGCCCTCCGCTCCAtagtcttttgaattcaaaactaGAAAAACCTGTTTTAAAGCGTCACATGGTCTACAAGTGCACGGCCTGCGAAAAGATCAGTAACTGCTACGAAGAGCACATTAAGCACATAGTCATCCATGAAGCTCCAGTGGACAGCCTTACAGCGACAACGTCTCTAAAAAAGCTAAAGAAAACCCCCAGTGGTTTCCTGAAATGCGACCAGTGTGATGGAATCTTCATGAGTGACCGTGAATACGCGCGCCACGAAAAAATGCACGTAGAACAAGTCTTCCAATGCGACATATGCAAAGCATTCCTGGCCAATAAGTCCAGTCTGAGAAAGCATGAAATCCGGGTGCACAAAAGGCAGACACCAAAAAAAGAAGTACAGTTCGAGTGTGTTACCTGTAATCAGAAATTTCCTTCAATGATTCTCATGGTTCATCACAAAAAATGCCACACGGATGTGATCAAGAAAATTGAGCAAATGACAATTATTAAGAGGGGCGAGGGGAAAACCCTTTACGTATGTAAAATTTGCGCAAAGACATCCAACAACAAATACCGGCATGAGGAACATTTACGAATTCACACAAAAGAGAAACCGTACAAATGTGAGCAATGCGGAGAAAGTATTGCAACTGCTAACGCGCTGGCGCACCATTTGCGTTTGCATGAGAACGATAGACCATTTCCGTGCGATGTCTGCGGAGCGGCATATCGTCATAAGAAGAGTCTGAAAAAGCACCTGAGACACCACACGGGCGAAAAGCCATTCAAGTGTCGTTGCTGCGAGAGAACGTTTGTCTTCAATTACACGCGAGCCGATCATGAGCGCAAATGTCATTTGGGTGATCCAAAAATACCCAAATTGCGCAGGCAACGTAGTGGTAAAGTAATACACAAAGCAAATCGTGAGACCAAGGTGCCTAAAATTGCTAACGTGGAAGTAGATTCGGAAAACGTAGAGAAAGATGAAAATTCCTCGGCTATTGGCGAATGGGAGAACGATTTTCGATTCATCGAAGAAGCAGAGTTGAAAGGTGAAATCTACAATCTCGAAAGTTTCGATGGGGCCCTTGCGAAGGTGGAACTGTGTGAGGGAATTGAACAGTCCATCAAGGAAGAACCTGAGGTTCAGTTGGAACCCGACATAGTCAACGAAGATTACATAGAAACAGAAAATGAGTTTAAAGAAGAACAGGCGGACACAGATGGATACAAACATCAGTGTAGTGAATGCACAAAGTGctttaaacgaaaagcaagccTTAAAGCTCACTTAACTGCTGTTCACTGTGAAAGTGATTCTGGTTCAGACAGACcaataatcaaaaaaatcaaatcccaACAGTTATCTGTGAAAGCCAAGATTACAGTATACAAATGTAAGAGCTGTGCTAAAGTTACAAAGGACTATAAGGAACATCTTCATCATATGAAGTCACACAAAAATCTAAGAAAATCCCATCCAAGTGGTCTTTCAAAATGCACCCTATGTCAAAAGCTATTTTCAAACAGTTTCGATTTTAAAATGCATAAGGCCCAGCATGAGGGTAGAAAGGTGTATCAGTGTGATATATGCAACGCTTTCCTATCCAATGAAATTCTGTTAGAAAAACATAAAAGCAGGCTACACACTGATAAGACACATAGCAGCGCTGCAGGAGATAATAAGTTCAGATGTGAATTTTGTGATAAACGATTTCCTCTTCAAATCCTGATGGTGAATCACAAGAAAACTCACGCCGAGGATGCTCAATTACTTGAAGACACAGCAACTATCAGTAAGGAGGGCAGCCGAATAAGTTACATTTGTAAAATGTGCGGCAAATCATCTAGTAATAAATCGCGCCATACTGAACATCTTCGGGTGCACACAAAGGAGAAGCCTTTCCAATGTGATATGTGTGGAGCAGCATTTACCGCACGCGGATCGTTGACGCATCATTTACGTTTACATTCGGATGAGAGACCTTTCAAATGTAACATATGTGACGTAACCTATCGTCACAAAAAAAATCTGAGGAGACACTTGCTAAAGCACACAGGCGAGAGGCCTTACAAATGTCACTACTGTGATAAACGGTTTTCCCTGAAATGCACCAAAACTGATCACGAACGGCAGaTATCAGAAGGCGGTGAAATTTCCGAAAATATTTGTTGGGACTGTGAGGATACATTACTGGGCTTCCACAAAAGTGTTGGCGAAGATAACGACGACGAAGAGGAACCTGTAGTTGTTGACGACGACGAAATCCTATACAAAAACTTGGAAAAAACAATACGAATTCACCGCCTGTCGAAAGAAGTCGAAATTATCAAAATCGAATCTTCTGAATCCGAGGATGAAGAGTGTTTTGTAATCCCAAAAGAAGACAAAATTATTACAGTTGAATCGGCAAGTACGATTGTTGGCATTTCAAAAAATCGTGGCGGTGCACTAGTTGCTGTAGTCAAGAAGAACACTTCCGACGAAATACAGTTCGATCAGAATCTTAAGAAAGATATGTTTACAAGAGCCAAAATATTCGAGAGTATGAGGTGCCCGCTTTGCCCATACCTATCTGGTATCGAATGTGAGGTGGTATTTCACATTCGTCAAACTCATCCCCACTACACGGGAGAGCACCTACGCTTCGATCCACAGGAGGGCGACACTTCGCTGACCAGAAGGATAATATTTGCCCGCATGTTAACGTTTTTCGAGTGCAAAGTATGCGGTAAAATCCATGACAGATTTTGGGTCCACAGGAAACATCTCACTGTCCACGATCGAAAAAATCCGAAGACAAAAATTGACAACGACATCACCTTAAACAACAACGAAGTATTAATCCCTCATAATAACGTGAATAAAGTTCAAACCTCAAAACGTGCCTTAGATACTGGCGAACATGATCGCGAAGCAAAAACTCCCAAATTCGAAGACCGTGTCCTACGCAGAGCTTCCAAGGACAAAAATTCTACGGAAACGAATCAAGCTACAACGGTGGATATCTCAAAATCTTTGGAAAACGCTGCAAAGAAGCAGCACAATCACAGCGCCAATAAAAAATCCAAATCCAAGGGTCTCTTACGCAAACAGCAGAAACTGCAAGCGAGGCGCGAGAAGAGACGTCTAAAACGAGAGGAGGAGAAGAGAGCCAAGGCGAAGGCTGTACCTAGTACAGTAATTCCGAAGCCAACTTTTAAAATGCCCCAACAACCAGCACCGCGTGCCTCCTCAGTAGTAAAGCAATTATTAAGCCAACCGAGGTATACCTGTAAGTTGTGTTCAACAACGTTAGCCACCTTTATTGCATGGAATGTGCATATGATAAACACACACTCGAAAATAGAGTTCACCTACAAATCAGCAGGAGACCAGACGCCCGACAACATCTGCAGAAAATGTGATAAAAGATTCCAAAGCGCGAGTAACTTGCGCATACACACGCGACTTTCGCATCGGCggaaaaaccgtcttgttgaaatcaATGGAAACGACAACGAGGAGATTTGTCGACAGACCCTAACGCCAAAAAAAGTATCCAAAGAACAAGAACAACAGCAATCTGATGAAAGTCCGCTTCCCAATGAAGTCTCGCCAGCGCTAAAGACCCCAAATCCTACCTTGACAAGTGCCTTATTATGTTCTTACTGTGGAATTCTGTTTGGCGATTTACTCACAATGAGTAAGCATGAGCCAGATCATATAGCGTGTGACCACGTAAAGCGAATTTTCCAAATCAAACCGCAAgcataa
- Protein Sequence
- MTDIRCKTCYELNDENSIKCEICKASLSDTNCSEVDECENDYRFIEEAELKGQVYKLENLNDNIFFEVLPVGVEKHDIKIEADENVTEFYRISNRPNVNNNEVLNIKPSEVVSSITIEPRKICEIEITLPEAPYTCDQCSKSFKRKASLNSHINRVHNPDDDDPRAYVSSIRTKSEPNRNVSPAFSESCDSEYVPPEENPPDNKNRKQTKSALKVKRKLEETSEESDAENNNSKKRTPKCNSTVSPPLHSLLNSKLEKPVLKRHMVYKCTACEKISNCYEEHIKHIVIHEAPVDSLTATTSLKKLKKTPSGFLKCDQCDGIFMSDREYARHEKMHVEQVFQCDICKAFLANKSSLRKHEIRVHKRQTPKKEVQFECVTCNQKFPSMILMVHHKKCHTDVIKKIEQMTIIKRGEGKTLYVCKICAKTSNNKYRHEEHLRIHTKEKPYKCEQCGESIATANALAHHLRLHENDRPFPCDVCGAAYRHKKSLKKHLRHHTGEKPFKCRCCERTFVFNYTRADHERKCHLGDPKIPKLRRQRSGKVIHKANRETKVPKIANVEVDSENVEKDENSSAIGEWENDFRFIEEAELKGEIYNLESFDGALAKVELCEGIEQSIKEEPEVQLEPDIVNEDYIETENEFKEEQADTDGYKHQCSECTKCFKRKASLKAHLTAVHCESDSGSDRPIIKKIKSQQLSVKAKITVYKCKSCAKVTKDYKEHLHHMKSHKNLRKSHPSGLSKCTLCQKLFSNSFDFKMHKAQHEGRKVYQCDICNAFLSNEILLEKHKSRLHTDKTHSSAAGDNKFRCEFCDKRFPLQILMVNHKKTHAEDAQLLEDTATISKEGSRISYICKMCGKSSSNKSRHTEHLRVHTKEKPFQCDMCGAAFTARGSLTHHLRLHSDERPFKCNICDVTYRHKKNLRRHLLKHTGERPYKCHYCDKRFSLKCTKTDHERQISEGGEISENICWDCEDTLLGFHKSVGEDNDDEEEPVVVDDDEILYKNLEKTIRIHRLSKEVEIIKIESSESEDEECFVIPKEDKIITVESASTIVGISKNRGGALVAVVKKNTSDEIQFDQNLKKDMFTRAKIFESMRCPLCPYLSGIECEVVFHIRQTHPHYTGEHLRFDPQEGDTSLTRRIIFARMLTFFECKVCGKIHDRFWVHRKHLTVHDRKNPKTKIDNDITLNNNEVLIPHNNVNKVQTSKRALDTGEHDREAKTPKFEDRVLRRASKDKNSTETNQATTVDISKSLENAAKKQHNHSANKKSKSKGLLRKQQKLQARREKRRLKREEEKRAKAKAVPSTVIPKPTFKMPQQPAPRASSVVKQLLSQPRYTCKLCSTTLATFIAWNVHMINTHSKIEFTYKSAGDQTPDNICRKCDKRFQSASNLRIHTRLSHRRKNRLVEINGNDNEEICRQTLTPKKVSKEQEQQQSDESPLPNEVSPALKTPNPTLTSALLCSYCGILFGDLLTMSKHEPDHIACDHVKRIFQIKPQA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00315458;
- 90% Identity
- -
- 80% Identity
- -