Curb002663.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cheilosia urbana
Gene Symbol
Zfat
Assembly
GCA_946477595.1
Location
CAMLCJ010000019.1:629873-641263[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.14 23 6.9 0.8 2 23 209 231 208 231 0.96
2 30 0.033 5.6 8.9 2.5 6 23 240 257 240 257 0.99
3 30 1.7e-05 0.0028 19.3 1.1 1 23 263 286 263 286 0.98
4 30 3.4e-05 0.0057 18.3 4.9 1 23 293 315 293 315 0.98
5 30 0.00081 0.14 13.9 0.2 3 23 322 343 320 343 0.96
6 30 0.0014 0.24 13.2 0.3 2 23 352 374 351 374 0.96
7 30 0.00098 0.16 13.7 1.0 1 23 381 404 381 404 0.94
8 30 0.24 41 6.2 2.3 1 16 410 425 410 426 0.90
9 30 0.04 6.8 8.6 0.4 1 23 527 550 527 550 0.97
10 30 0.016 2.7 9.9 0.2 6 23 559 576 559 576 0.98
11 30 0.00015 0.025 16.3 1.0 1 23 582 604 582 604 0.99
12 30 8e-05 0.013 17.1 1.7 1 23 613 635 613 635 0.91
13 30 0.27 45 6.0 3.0 3 23 642 663 640 663 0.93
14 30 0.17 29 6.6 3.7 3 23 673 693 671 694 0.94
15 30 0.00012 0.021 16.5 1.2 1 23 701 724 701 724 0.95
16 30 0.017 2.8 9.8 0.4 1 17 730 746 730 746 0.91
17 30 9.9 1.7e+03 1.1 0.6 2 20 995 1013 994 1017 0.84
18 30 0.07 12 7.8 1.5 6 23 1026 1043 1024 1043 0.99
19 30 0.00028 0.047 15.4 0.3 1 23 1049 1071 1049 1071 0.99
20 30 1e-05 0.0017 19.9 0.8 1 23 1079 1101 1079 1101 0.99
21 30 2.7e-05 0.0046 18.6 0.3 2 23 1108 1130 1107 1130 0.95
22 30 2.3e-06 0.00038 22.0 0.5 3 23 1138 1158 1137 1158 0.96
23 30 0.0011 0.18 13.6 0.5 2 23 1167 1189 1166 1189 0.96
24 30 0.00067 0.11 14.2 0.0 1 23 1196 1219 1196 1219 0.94
25 30 0.0056 0.93 11.3 0.2 1 17 1225 1241 1225 1242 0.89
26 30 0.27 45 6.0 0.3 2 23 1476 1498 1475 1498 0.94
27 30 1.1e-05 0.0018 19.8 1.0 1 23 1530 1553 1530 1553 0.95
28 30 0.00045 0.075 14.8 6.4 1 23 1556 1578 1556 1578 0.98
29 30 9.8e-05 0.016 16.8 2.2 2 23 1585 1607 1584 1607 0.96
30 30 0.16 26 6.7 0.7 3 23 1614 1634 1613 1634 0.95

Sequence Information

Coding Sequence
ATGAATATATTTGATAACGAAGGAATGCGGCTCAACATCAGCTCTATTGTTACTAAACACTTCTGGCTGCAGCCAAGTATAGAAGACTTCAATAAGAGCACAATCTGCTGTTCCTGCTGGCAGGCTGTATACGCATTCCATGAGTTCTACCAAAAAGTGGAGAAAGCACATGACGAGTTTTCAAATGTAATATTTCCAATTGACTTCGATTTGAAAAACGACGATTTTGATGCAGGTCCTGACTTGTGTGCCGAAGATATCAAAGTTGAGTCGTGTACGCAACTTAAGGTTGATTTTACAAAAGATGAAGTACGACTAATTATCGCTGAGGGGAGTATGGAAAAACAAGCCGAAATAAAATCCGACTCAGAATCGGATTTGCCATTAGGGAAATTGAGTGCGCTTCAAAACTCAACAAAAAGTAGTGAACCCGTGTCGGACACTGATGATTCCACTGATGATAAATACAATGATGAAGGTGATAACGACGAAGAAAATGATACTGACTGTAAAGTACCTGAAAGCAAGCAGACAGATAATAATGCCACCTCCAAGGGAGAGTATAATAAGCACCGAATACCCTGTAAACAATTTGATGAGATTATCAAACAGAATATGAAGCTGTCGTGTAACGTTTGTCACATTCCTTTGGAAAGTTTTTTCACTCTCAAGGAACACTATAGGTCTGCTCACAATAAAACCGCCTACGTAAACTGTTGTGAGAAGAAATTCAGCAGCCGTCATGCCCTGGTTCATCATATTCTTATGCATAAAGATCCAGAGACATTCAAGTGCATGAAATGCGGTCGCGTCCTAGCCGACCGCAGAGGCTTGAAGCGGCACATGAAAACGACACATGTAAATGAGGATCGTATCCATCAGTGTCAGAAGTGTAAAAAGGGTTTTCGGCGGAAAGAACTGCTAGAGAAGCATGAAAAAACACATGTGAGACCTGAGGTTATATGCGAGCAGTGTGGCAAGGTAGTACGCGGCAAGCAGTATCTCAAACAACATCAGTTGCGAGAGCATTTGGGAATACCGAAACAACGTCAACAGTGCCCCAAGTGTGGAGTTTATCTTGCGGATAATTCAACTCTCTCCACTCATATGAAGTATCAGCATCCAGTTGTCAAAGTTGTACACGAGTGTCATATTTGTGGGAAAATATCAGCCACTGGTTACGGCCTAAAGCGTCACATAGAATACATGCACACACGGGGACGACCGCATAAATGTACATTGTGCGAAAAGGCTTTCAAGACGCTCAAGTGTCTGCGGCCAAATGATGACGATCCCAACTCGAAAGCAATCTGTTTTTCTTGTTGGAGTGCTTTATATTCATTCCACAAATTCTACCAAAGAGTGCAGGAAGCTCACGTTAAGTTGGCCAGCGAAGATGATGGATCTGCAAATGAATTTGACACATATCCTGAGCGCACAGACATTAAACTTGAGACCGATGATGAACCCTTAACGGATATGGCAAAGTTCAACGCAGAATGTTCTGTGAAACGAGTCGGAAATAATTCGTGCTCTAGCTCTGACTCTGAACTTCCTCTAGCTAAATTAAGACTTCGATTTTCCTGTGAAATATGCCAAATCCCACTGTCCACTTTCTTTGTGCTCAAGCAGCATTATCGCTCTGTTCACAATAAAGCTGGTCAAGTCACCTGTTGTGGCAAAAAGTTCGAGAGTCGCTACAAACTAGTCACACACATTTTGTTGCATAAAAATCCAGAGTACTTCAAATGCCAACTTTGCAACAAGGTCATGGCCAACCGAAAGAGTTTGAATAATCATATGAACGTCCACGCAAACGATGGTGAGCCAGGTGCATATGATTGCAATAAATGCCAAAAGAGTTTCTCACGAAAAGGGAAGCTGGATCGGCATTTGCCGACACATGAGACAATTGGACAAATTTGTGAACTTTGCGGTATATTGTGTCGTGACAAAAACTCTCTCCGGCTACATCAGCACCTAAAGCATAACGATGACCCACGACCACGGGTTAACTGTAAGAAATGTGGTTTGGATTTCGCGTCTAGAGcaaatgttaaatttcacatgAAGCATCATCATCCAGAATCTTTGGCAACGCATAGGTGTACTGTTTGCGGAAAGGTGTCGTCTAATGCTAACGGCCTAAGACGGCATACCATGTACATGCACAAGTTTGAACGGCGGCACAAGTGTACCATGTGCGAGAAGGCGTTTAAAACTAAGCAAGGGCTTAGGCCAAATGAAAACGATGTAAATTCAAATGTTATATGTCATTCCTGTTGGGCGAAATTGGAGTCCTTtcataaattttatatgcaagtTGAAGATGCCCATGTTCGATTACAAAACACCGAACCCATTGACGAGGATGACTTGAAACTGGAAAGGGAAATCGCAGAAGCACTTCGCTCTGCAAATGCTGAGCACTTTCATGAGTTATTACCCATACCGGAGGTACTGGAAGCAGATGTAAAAGTAGAAGTTAAAGAAGATACAGACGCAGCCGTGCCACCCACCATTGATCCAGCTGATAGTGAAAAAGATGTTGCCTCTCAAATCGGTTCGGAAAGAAGGATCTCTACAGATTCTGGAAACTCAGTACAGAATGAAACTCCACCCGCGTGCTCTACAAGAAGTCGGACATCTGTTGAAAAGCCTTACGCCGAAAGCGACTCTACCAGTGACAATAAAATTGACAACGATGTTGAAGCTGAAATGCGGACCACATCATCAGACTGGCTGGATCTGGACTCAGACATCGACGACGACAATGATGACAGTGACTACGACGTCATCAGCACAACGACATCAAAatcgaaatcaaaacaaaagaaagcgcCTCGGAAAACAACGACAAAACGTAAGTGTAAGAAAAACGAAGATGAACCACAAAAGAAGAAGCGTACATCAGAGCGGGTAACTAAGAAAATGGAACGCATGAAAGAGTACGATGAAATAATTGCCAAAAGCATGAAGCTATCGTGTGATATCTGTGCGGAAGTATTCGCAAACTTTGCTATTATGAAGCGCCACTTTCGCTGTGTTCACAAGGAATGCGGCTATATTTCTTGTTGTGGCAAAAAGTTTCGTAAACGCGGCGTTCTCGTCGATCATATTTGTACCCATCAAAATCCAGACTACTTCAAGTGTGATAAATGTGGCAGGATTCTAGCCAGTCGTAAAGGTCTCGATAGTCACATGTTAACCCATGACACTGAAAAGCAGCGCATCTATCAGTGTGATCAGTGCCCAATGAGTTTCTATACAAAGCCACTGTTGTCACGCCATTTGCAAACGCATCTTTCCGAACGCAATATAAAGTGTCCGGAATGCGATAAGCGTTTCTCGACACAAGACATCCTACGCACACACATAAACAATGTTCACAATGCAGCGTACACCAGAATTTGTGATCAGTGTGGAAAGTCGTTCCGTCGGCCGGACGCCTTTCGCAGGCATCAATTGGAGCACGATGGCGTAACACGGCCACTTGTTCCGTGTGAAAAATGCAGCGTGAAACTGACCAGCAAATATGGCCTGAAGCGGCACATGCAATCGATGCATCCCGAGACGGATATGAAACATGTGTGCGACGATTGCGGGAAGATCGCACCTAGTGCGGCGGCCTTGCAGCGTCACATATCGTACATGCACAAAATGGAACGCAAATACAAGTGTCCCATGTGCGATAAGGCTTTCAAGAAGACCGGCGGACTTAAGGTAAACAAAACTAAAGCAAGCAAATTTGTGGATTGGTTACTGAATAACTACTTTAACATTTCGCAGCCGACTCCAAACGATGGCAATGCAAATGTTATATGCCCGTCCTGTTGGAGTACGTTGAGTTCATTTCACAAGTTTTATCTAAAAGTCAAAGAAGCGTATGAGAGTCTGGAAGAGGCTAATGCCATTGCAGCAATAGAGTCGAAATTGGAACTAGAAATGGACGAAGATATAGAAATTATTCCAAAGTCCGAGATAAAGATTGAGGCGGAAGAAGTTTCCGAACAAACAATGCCAACGATCAGAGTATTCGAATCACAAGGAGATACCGAACCAATTCTGATGCCAGAAGCTGTTCCACCCGATACATATTTAAGGAAATTATTCGGCGATGAGGCACCATCTACCAGTTGTATAGAAAGACGTACTTACTCTGGCGAAGGCAACGTTTGCATCGTTAATAGGCAGAGTGACAATGGAAACTTGCCGATAGACTGCCAGAATCAGAATTCGGATGATGAATATAACAAGTACGAGAAGGATTTCGATGATAGTGGCTGGAAAAACAGCTCATCGAAACAAAAGAGCCCgataagaagaaaacaaaaaccttccGACGGCAGAAACACAAAGCAGCGAACACCAAGGAgtataaaaatgaatgaaagCAATGAACTTATTTCAAATTCTGTAACATTATCGTGTGATATTTGCGAGTCGATATTTCCGAGTTTCACTGTTCTAaagaaacattttcgtttagagcataaaaaaaatggttatgcCACCTGCTGTGGCATGCGAATATATGAACGTTGTTATCTTGTTGACCACATCTACTTGCATAACGACCCATATTATTTCCAATGTGACGAATGTGGACGTGTTCTTTCTTCTCGCAAAAACCTAAAACGACACACCCTGCTAAAGCACATAAACTACCATTGCGATAAGTGTGAGATGAGTTTCTATACAAATAATCAGCTTAGTCGCCACATGCATACACACATTTCCGGAAACAATATAAAGTGCACACATTGTGATAAATTCTTCTCGACGGAATTCCTTGCCCGTAGACACATGCGCGGTGCTCATAATACTAAATCTAAAATCTGCGATCAATGTGGAATGTCTTTTCTTACGGTTAAAGCCCTCAGGCAACACCATTTGGAACATAATGAAATATACCAAAACCACATAGAACAGTAA
Protein Sequence
MNIFDNEGMRLNISSIVTKHFWLQPSIEDFNKSTICCSCWQAVYAFHEFYQKVEKAHDEFSNVIFPIDFDLKNDDFDAGPDLCAEDIKVESCTQLKVDFTKDEVRLIIAEGSMEKQAEIKSDSESDLPLGKLSALQNSTKSSEPVSDTDDSTDDKYNDEGDNDEENDTDCKVPESKQTDNNATSKGEYNKHRIPCKQFDEIIKQNMKLSCNVCHIPLESFFTLKEHYRSAHNKTAYVNCCEKKFSSRHALVHHILMHKDPETFKCMKCGRVLADRRGLKRHMKTTHVNEDRIHQCQKCKKGFRRKELLEKHEKTHVRPEVICEQCGKVVRGKQYLKQHQLREHLGIPKQRQQCPKCGVYLADNSTLSTHMKYQHPVVKVVHECHICGKISATGYGLKRHIEYMHTRGRPHKCTLCEKAFKTLKCLRPNDDDPNSKAICFSCWSALYSFHKFYQRVQEAHVKLASEDDGSANEFDTYPERTDIKLETDDEPLTDMAKFNAECSVKRVGNNSCSSSDSELPLAKLRLRFSCEICQIPLSTFFVLKQHYRSVHNKAGQVTCCGKKFESRYKLVTHILLHKNPEYFKCQLCNKVMANRKSLNNHMNVHANDGEPGAYDCNKCQKSFSRKGKLDRHLPTHETIGQICELCGILCRDKNSLRLHQHLKHNDDPRPRVNCKKCGLDFASRANVKFHMKHHHPESLATHRCTVCGKVSSNANGLRRHTMYMHKFERRHKCTMCEKAFKTKQGLRPNENDVNSNVICHSCWAKLESFHKFYMQVEDAHVRLQNTEPIDEDDLKLEREIAEALRSANAEHFHELLPIPEVLEADVKVEVKEDTDAAVPPTIDPADSEKDVASQIGSERRISTDSGNSVQNETPPACSTRSRTSVEKPYAESDSTSDNKIDNDVEAEMRTTSSDWLDLDSDIDDDNDDSDYDVISTTTSKSKSKQKKAPRKTTTKRKCKKNEDEPQKKKRTSERVTKKMERMKEYDEIIAKSMKLSCDICAEVFANFAIMKRHFRCVHKECGYISCCGKKFRKRGVLVDHICTHQNPDYFKCDKCGRILASRKGLDSHMLTHDTEKQRIYQCDQCPMSFYTKPLLSRHLQTHLSERNIKCPECDKRFSTQDILRTHINNVHNAAYTRICDQCGKSFRRPDAFRRHQLEHDGVTRPLVPCEKCSVKLTSKYGLKRHMQSMHPETDMKHVCDDCGKIAPSAAALQRHISYMHKMERKYKCPMCDKAFKKTGGLKVNKTKASKFVDWLLNNYFNISQPTPNDGNANVICPSCWSTLSSFHKFYLKVKEAYESLEEANAIAAIESKLELEMDEDIEIIPKSEIKIEAEEVSEQTMPTIRVFESQGDTEPILMPEAVPPDTYLRKLFGDEAPSTSCIERRTYSGEGNVCIVNRQSDNGNLPIDCQNQNSDDEYNKYEKDFDDSGWKNSSSKQKSPIRRKQKPSDGRNTKQRTPRSIKMNESNELISNSVTLSCDICESIFPSFTVLKKHFRLEHKKNGYATCCGMRIYERCYLVDHIYLHNDPYYFQCDECGRVLSSRKNLKRHTLLKHINYHCDKCEMSFYTNNQLSRHMHTHISGNNIKCTHCDKFFSTEFLARRHMRGAHNTKSKICDQCGMSFLTVKALRQHHLEHNEIYQNHIEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-