Basic Information

Insect: Cheilosia soror
Gene Symbol: L_1
Assembly: GCA_948107745.1
Location: OX443561.1:79078355-79139057[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.5e-06 0.00065 20.7 1.7 1 23 316 338 316 338 0.98

2 15 0.46 54 5.2 5.8 1 23 344 366 344 366 0.98

3 15 2.4e-07 2.8e-05 25.0 3.1 1 23 372 394 372 394 0.99

4 15 1.1e-05 0.0013 19.7 0.3 1 23 400 422 400 422 0.98

5 15 9.1 1.1e+03 1.1 0.2 3 23 486 508 484 508 0.81

6 15 0.0041 0.48 11.7 0.4 2 23 525 547 524 547 0.97

7 15 0.02 2.4 9.5 1.4 1 23 628 650 628 650 0.97

8 15 0.0011 0.13 13.5 1.0 2 23 658 679 657 679 0.95

9 15 0.0015 0.17 13.1 0.7 1 23 687 712 687 712 0.90

10 15 0.0014 0.17 13.1 2.9 1 23 804 826 804 827 0.96

11 15 0.001 0.12 13.5 4.6 2 23 1010 1032 1009 1032 0.96

12 15 0.12 14 7.0 0.1 1 23 1038 1060 1038 1060 0.92

13 15 9.9 1.2e+03 1.0 0.5 2 23 1068 1089 1068 1089 0.93

14 15 0.02 2.4 9.5 0.0 1 23 1209 1231 1209 1231 0.95

15 15 1.7 2e+02 3.4 1.2 1 23 1238 1260 1238 1260 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.5e-06	0.00065	20.7	1.7	1	23	316	338	316	338	0.98
2	15	0.46	54	5.2	5.8	1	23	344	366	344	366	0.98
3	15	2.4e-07	2.8e-05	25.0	3.1	1	23	372	394	372	394	0.99
4	15	1.1e-05	0.0013	19.7	0.3	1	23	400	422	400	422	0.98
5	15	9.1	1.1e+03	1.1	0.2	3	23	486	508	484	508	0.81
6	15	0.0041	0.48	11.7	0.4	2	23	525	547	524	547	0.97
7	15	0.02	2.4	9.5	1.4	1	23	628	650	628	650	0.97
8	15	0.0011	0.13	13.5	1.0	2	23	658	679	657	679	0.95
9	15	0.0015	0.17	13.1	0.7	1	23	687	712	687	712	0.90
10	15	0.0014	0.17	13.1	2.9	1	23	804	826	804	827	0.96
11	15	0.001	0.12	13.5	4.6	2	23	1010	1032	1009	1032	0.96
12	15	0.12	14	7.0	0.1	1	23	1038	1060	1038	1060	0.92
13	15	9.9	1.2e+03	1.0	0.5	2	23	1068	1089	1068	1089	0.93
14	15	0.02	2.4	9.5	0.0	1	23	1209	1231	1209	1231	0.95
15	15	1.7	2e+02	3.4	1.2	1	23	1238	1260	1238	1260	0.93

Sequence Information

Coding Sequence: ATGTTGTCTTTAAGACGCTTCTTCGAAGAGTCCCGAGTTTTAAAGGTGGTTAATGCAGAGAGCGCTGTGATGGCGGGCGATGATGACAGTCCTATCGACATCCATGAGGAACCAGGCGTATTTGCAATCGATCCAAAGGAGGAGATAATGTCCGATATTGAAAGTGACGTCGACGGAGATGAACATTGTGATGAATTTCAAGACAATGGGGGACACGCAGACGACACCGACGATACCCGTCGTACGACACTGATTGACAAACCGCAACCCGAGGATGATTTTTCCATGGATGACAGCAAAAAGGCGGAACTATACCCCACCGATATTGGCATCGAGCTTGACGAGCACAGCTCTGACAGTTTTTATTCCGATCTGTACTCCACGCACACCTCGTCCAGCTACTCACCCTCCATGTCGGATGGGACAATTACTCCAAACTCGTTGCAcaaccaccatcaccaccacagCCAGCAgaaccaccatcatcatcatcttcagcGACTGCACCACTTGCAATACCAGTGCGAACAACAGAACAGCGGTGGTCACAATCGCGACAGTAGGCATCACAATCGACGTGTTTCAGCCATAAATGGAGCAACTGCCACCGGTGTTGGTGTTGCCGGCGATGGGGACGagaatgacgatgacgatgatgacgacgggGACAGGGACGAAGATGACGACGCCGCGAATTCTAGCGAGGAAAGGGTTTTCCTCTCATCGAACGGTGGTGGTGCCAACGATGCCGCCAACCCCAACACCGCCACCATCGCCACCACCGCAtccaccaccgccgccgccgccagcAGCATCAGTGGCGCAATCGGTGAACATTCCATGAAAATTCCAACGAAATTGCGGAAAATCGATAGGGATTCGGCAAAGTTGTTGGATAAGTTGACAAGTGATGGCATTAAGAGCGCGACCGACCGCGACGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGCCTTGGGTATCTGAAGAAGCATGAACAGAGCCATGCGGAGCATCTCCCATTCAAGTGCGACTACTGTGCAAGGCTTTTCAAGCACAAAAGGTCGCGTGACCGGCACACCAAACTGCATACCGGGGATAGGCGGTACAGATGTCCGCACTGCGAGGCTGCATTTTCGAGAAGTGACCATCTGAAGATTCACATGAAAACCCACGACAACCAGAAACCCTTTCAGTGTACGATTTGCAATCGTGGCTACAATACAGCGGCGGCTTTGACGTCTCACATGCAAAATCACAAGAAGCAGGCAGCTCTGCTCGCCGCTGGAGGTAACCCGGCAGCGCTTAATTACAGTCCCCGTTCAACTGGATCCGGTTCGAGTAATGGCAGTCTGCAGAAACGTCGGTACGCGTCAGTGGCCAACACTAAGAGCCCCAGTCCAAGCACTTTGGACTACGCGAAGCGTGTGCGCAGCTCTATCGTCTCGTGCATGTACTGTACTAAATCTGATTTTGCATCGATGGAGCAGCTCAGCAGTCACATCCAAGCTATGCACGAGAAGGAAGCACTAGCCAATCAGCCCGCCACCAGTGGTTTTCAGATGTCCTGCGAGTACTGCACAATGAAATTTCCCAGCATTCCGGCCATGTTCCAGCACATGAGAACCACGCACATCGATCGTCTGTCCAGTCCGACAAGCTACTTTGAGCACTTTAACCGGTTAGCGGCGTCGGGTACGTTTAGTCCGCGCCTGCCAACGCCGAAGTTACACGAGACAAAAGTGAAGGTCGAAGAACCGAGTCCCAAGGAGTTGGAGAAACCAGACGACGAACCAACAGATTTGAGCCAAAATAAGCGTTCGGCCCAGACGCCGTCACAGGAGTCTGCCGAAGCTGTGGAGAAACCCGGAGTATTCTTCTGTAATCAGTGCAACGATGGATTTCCTGATTTTGACAGTTTCCGCAACCATCTTAAGTCGCACATAGTGCAGGGCCTGAACTTGGTCTGCCACCACTGCGGGCAGTCGTTGCGCGATCAGCCCGAGTATGAGCGGCATGTGGTTTCACATTTCCTGATAACCAGCACCGAGTATAGCTGCACTGAGAAAAACTGCAGTAAGATGTTCGCCAAGCCGGAGGAACTGCAAAAGCACCTCTTTGACAGTCACCTCCAGACGATGTACAAATGCCTGCTGTGCTCCGACCTATTCGAGACAAAGGTTGCGATTCAAGTCCACTTCGCGTGTATACACTCGCCGGAGAATAAGGTCTTCCGCTGTTCGGCCTGCATGGATACCTTCCACGGAGAGCAGGAGTTCCATATCCACGTGAAGACTCGTCATCAAACGATAGTCGGCTCGCCTATACAGTGCATGTTCTGCAGGGCAGTTTGCTCCACAGAACTGGAGATGCACTTCCACCTGGCCGCGCATGCACGACAATTTCGCTGTCCATCGTGTCCAGAGACGTTTCACGTGGAGTTTCTGCTCGACCGTCACATGCAGACTCACCATCACGGACAAAAGGATGCCGAAGCACCGCCTGCCGTGAATTCGCCAATCAATCCGATAAATCCCATCTACATGAGCGCTCTCTTCAACAAGCCACCGCCCTCGAcacagaacaacaacaacagcattcTGGACTACAACGCCTTCGCCATGGGAAAGAACCTCTTCGCCAATGCCTCGGGGAATAAGTTCTACAATCCACTGCAGGTGGACACGGGCTCTACGATGAAACACCCCTCCCTTGTGTACGCCAGCTTAAATCAGCGCTACTTTGACACCAATCGGACTATTCTCGAGATGTATAACCAGCACCAGCAGGAGAAGATTAGCGGGGTGACAAACTACTTCAACAgccccaacaacaacaacaacaacaataataacagCAGAAGCGTTCCTAAGCCTCAGCAGGAAGGCAATAAATCGACGGACCGGTCTGTAGGCGGCGGTTTCAGCTGTGGCATGTGCGAACGCAATGATTTTCGAACAGAGGCTGAGATCCATTCACACCGCAAGATCGTTCACAATCTCAAGACGGGGGTAAGCCTTCGCTGTGCTTACTGCAGCGGTAACTTTAAGTCCCGCAGCGAGCTGGAGCATCACATGAAGACTTGCCACAACTCCACCGGAAAGCACAAATGTCTGATTTGCGATGAAATCTTCCCGTCGCCAGCTATCCTCGCCGAGCACAAGCTGCAACACTCCAAAGTGGGACAGTCCGGCAAGTGTTCGCACTGCGCCCACGCCTTGGCAGACGTGGCTGCCTTCAAGGGTCATCTATTGGAGCACAACACTGAGGGCCAGATGCCAGTTCAGTGCATTTGCTGCCGCCAAACGCTTCATTCTGACTTTGAGATCGGTCTGCATGCCAAATTCCACACAAAGTCGTCATCTGTCTCGGAGAGTGCATGCGCCCTGTGCCTGGAGACCATACCCAACACATCAGATGCCAAGGTGTGCGAGAAATGCTGCCGCAAACACAATTTGAGCACCAAGTTCAACAGCCAGCGGAGCTTCGACAGCAGCACCGGTCCTTCGAACTATGTGGAGAACCGATGCAACCTGTGCAAGGTCATCATGCCGCATGCACAAAAACTCCAAGAGCACCTGGTCGAGCATACTTTCGCCGGCTGCGAGGACAGAGGCTTCATATGCTACATCTGCTCCGCGGTGTTCACAGCGCCCGGTGGTCTACTGAGTCACATGGCCGACCACGGTGCCAATGCTCGCCCCTACGACTGCAACCTTTGCAGCGACAAGTTCTACTTCCGCGCAGAATTGGATCACCATCTGGTTGAGCACGAGACAAGAGGTCGCCTGAAGAACGTAAGTGCCGGGGAGGCGAGTCCCCACCCAGACACGAAGGAGCCCCCTCAAGCAGAAGTAGCAACTCCCAAGCTAGAGCTGAAGAACGAAGTCGTTGACGATAAACCAACTGCcgacgaagacgacgacgagTACATTGAGGTGGAGAAGGTACCAGAAGTCCCACTGGACACTGCTTCCCAAGAGGACTAA
Protein Sequence: MLSLRRFFEESRVLKVVNAESAVMAGDDDSPIDIHEEPGVFAIDPKEEIMSDIESDVDGDEHCDEFQDNGGHADDTDDTRRTTLIDKPQPEDDFSMDDSKKAELYPTDIGIELDEHSSDSFYSDLYSTHTSSSYSPSMSDGTITPNSLHNHHHHHSQQNHHHHHLQRLHHLQYQCEQQNSGGHNRDSRHHNRRVSAINGATATGVGVAGDGDENDDDDDDDGDRDEDDDAANSSEERVFLSSNGGGANDAANPNTATIATTASTTAAAASSISGAIGEHSMKIPTKLRKIDRDSAKLLDKLTSDGIKSATDRDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPAALNYSPRSTGSGSSNGSLQKRRYASVANTKSPSPSTLDYAKRVRSSIVSCMYCTKSDFASMEQLSSHIQAMHEKEALANQPATSGFQMSCEYCTMKFPSIPAMFQHMRTTHIDRLSSPTSYFEHFNRLAASGTFSPRLPTPKLHETKVKVEEPSPKELEKPDDEPTDLSQNKRSAQTPSQESAEAVEKPGVFFCNQCNDGFPDFDSFRNHLKSHIVQGLNLVCHHCGQSLRDQPEYERHVVSHFLITSTEYSCTEKNCSKMFAKPEELQKHLFDSHLQTMYKCLLCSDLFETKVAIQVHFACIHSPENKVFRCSACMDTFHGEQEFHIHVKTRHQTIVGSPIQCMFCRAVCSTELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHHGQKDAEAPPAVNSPINPINPIYMSALFNKPPPSTQNNNNSILDYNAFAMGKNLFANASGNKFYNPLQVDTGSTMKHPSLVYASLNQRYFDTNRTILEMYNQHQQEKISGVTNYFNSPNNNNNNNNNSRSVPKPQQEGNKSTDRSVGGGFSCGMCERNDFRTEAEIHSHRKIVHNLKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCAHALADVAAFKGHLLEHNTEGQMPVQCICCRQTLHSDFEIGLHAKFHTKSSSVSESACALCLETIPNTSDAKVCEKCCRKHNLSTKFNSQRSFDSSTGPSNYVENRCNLCKVIMPHAQKLQEHLVEHTFAGCEDRGFICYICSAVFTAPGGLLSHMADHGANARPYDCNLCSDKFYFRAELDHHLVEHETRGRLKNVSAGEASPHPDTKEPPQAEVATPKLELKNEVVDDKPTADEDDDEYIEVEKVPEVPLDTASQED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542500;
90% Identity: iTF_00314731;
80% Identity: -