Basic Information

Insect: Cheilosia soror
Gene Symbol: -
Assembly: GCA_948107745.1
Location: OX443564.1:5014638-5043312[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.5 4.1e+02 2.4 1.3 3 21 623 641 622 645 0.92

2 14 0.063 7.4 7.9 0.7 2 19 667 684 666 687 0.92

3 14 0.95 1.1e+02 4.2 0.5 1 23 704 728 704 728 0.92

4 14 0.1 12 7.2 0.1 1 22 733 754 733 757 0.89

5 14 0.00058 0.068 14.3 2.0 2 23 828 850 827 850 0.96

6 14 0.13 15 6.9 0.5 1 16 855 870 855 876 0.85

7 14 0.49 58 5.1 0.2 1 23 901 923 901 923 0.93

8 14 0.0011 0.12 13.5 3.6 2 23 937 957 936 957 0.97

9 14 3.5e-05 0.0041 18.2 2.1 1 23 963 986 963 986 0.96

10 14 2.3e-06 0.00027 21.9 1.8 1 23 1002 1024 1002 1024 0.98

11 14 0.14 17 6.8 0.3 1 23 1031 1055 1031 1055 0.97

12 14 0.00026 0.031 15.4 1.2 1 23 1061 1085 1061 1085 0.98

13 14 0.0015 0.18 13.0 0.5 1 23 1092 1114 1092 1114 0.99

14 14 0.0019 0.23 12.7 2.0 1 22 1120 1141 1120 1145 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.5	4.1e+02	2.4	1.3	3	21	623	641	622	645	0.92
2	14	0.063	7.4	7.9	0.7	2	19	667	684	666	687	0.92
3	14	0.95	1.1e+02	4.2	0.5	1	23	704	728	704	728	0.92
4	14	0.1	12	7.2	0.1	1	22	733	754	733	757	0.89
5	14	0.00058	0.068	14.3	2.0	2	23	828	850	827	850	0.96
6	14	0.13	15	6.9	0.5	1	16	855	870	855	876	0.85
7	14	0.49	58	5.1	0.2	1	23	901	923	901	923	0.93
8	14	0.0011	0.12	13.5	3.6	2	23	937	957	936	957	0.97
9	14	3.5e-05	0.0041	18.2	2.1	1	23	963	986	963	986	0.96
10	14	2.3e-06	0.00027	21.9	1.8	1	23	1002	1024	1002	1024	0.98
11	14	0.14	17	6.8	0.3	1	23	1031	1055	1031	1055	0.97
12	14	0.00026	0.031	15.4	1.2	1	23	1061	1085	1061	1085	0.98
13	14	0.0015	0.18	13.0	0.5	1	23	1092	1114	1092	1114	0.99
14	14	0.0019	0.23	12.7	2.0	1	22	1120	1141	1120	1145	0.94

Sequence Information

Coding Sequence: ATGCTCGAAGAGGACCTCGATGATACACACTTGTGCATCAAGTGTAGCGCCACAATTGTCGGCCTTGATAATTACATTCAACATCGCAAAACGAATTGTGGCAGCAAGGCAACAGCCGGCTATGGGGAGTTTGAATATCCGGATGCGACGAACTACCCGAAGACTGAGGTGGAGGCGAGTGGAGGGAAGGCTTCTAAGAGCCTGAACGATCCGTATGACTTGTCCTATGAGCCGGGGGCTGATGTGTTCTTCTCCTCGCTGCAGTTGCAAAGCGTTCAGGCAAGCTCTGGCGGCAAAGCCAGTAGTAGTGCCCAGCAGATATTGACAAGGAAGGCTACTGCGACGCTGTTGTCTTCTGGGCGAGATGAGGCCGGTGGTGGGGGTGAGTGGCAGGAGGAGGCACCCACCAACAATACGGACAACCTGATGAAGGTGGTGCGAGATATTGGTGAGACGAAGAAGTTTGAGCCGATCTTCAAGCCGATTGCGTTCGCTCATGGGTCTCCCGAGCCGGAGCAGAGTGATGACGAggacgatgatgatgaggagttcgacgacgatgatgatgacgatgaggacTACGTACCGACTCCGTATAGTGGGGGGAAATGGAAGCCCGGCAGTCAGCCGGCACCCAGGAGCGGTGGGAAGTGGAAAAGTCGAGCGCAGCCAGCGGCTCCTATCCCAGCGACACATACTGGCGGAAAGTGGAATTTCAAGTCGGCAAAGTGCAAGACTGCCGACAAGCCAATGCCAGAGACCTCCTCTGATAGGTTGCTATCGCAGATACGAGCGAAGCTTAAGCCCACTTGTGGCTACATCCCAAAGGAAGCGGCCGAAGGATTTGCATCGCCAGAAGTTCATCCCGAAGCTGGTGGTAAGTGGAAGCCGGGGTTTTCCAAGTTTCCTCCAAGCGCCAAGTGGAAGTCGTCGGATGGTCAGGAATCACCGGAAGTTCTGGAGGCCCAAACAGGTGGCAAATGGAAGCCTGGCCATGGGCCGTCAACTGGTGATAAATGGAAACCCGGTGGATCGAAAACATTGAAGCTTTTGCTTCCTCCGCTCAGTGGTGCAAAGGGCAAGCAGCGCGAGGAAAACCAATCACCGGAGATCTTGGAAACGCAAACCGGAGGTAAGTGGAAGCCGGGGCATGGGCCGACAACGGGCGGGAAGTGGAAACCAGAAGATCGCCCAGCAGATTTGAAGATCTCTCAAGAACCAGAGCCAGAACCACCGGCATGGGACGATCAGGAGCCATGGGGTGAGGATGTTGGCGATACCCACCCCCCACTGGAGCACACCAAAGGCAAATGGGTGCCAGGAACAAAGGTCGAGCGGCTCGAGTATAAAGAAGAGGTGCTTCCACCGCCGCAGGACTTCTGGTGCAACATCTGCTGTCGCAAACTGAAGACCAAAACCATCTACGAGAAACATCTCAAGTCTGGTGTTCACTCACGAAAGTCTGAAACCGAGCAGCAATTAGAACGTGCTGCCGTCGAACAACTAGAACTGTCCCAACAAATCCTCCGACCGCCGGCCTTACTGCTGGAGCGAGCCCCCTCTCCCGAGCCGGACCCTGACAAGCGTAAAAGACGTAAAACCTTCATAAAATGTGAACTCTGCAAACACCGCATGCAACGCTACCTGGTGGGCAAGCATCTCATTTCCCACTATCACTACGTTCGAATGAGCATGAACCCGAAAGTGTCCTTCAACATGATCCTCGACAACATTCACGCCATAGTGCTGCAATCGCCGTTTCAATGCAGCCCCTGCCGGTTCTACGCAAACACCGAAGAGAACTTCCTCAACCATTGGAACTCGGTCGAGCATCGCGATAGGACCGAAGGTCCTGGCAAATTCTGGTGCAGCTTTTGCCGTTTCGAATGCGAGGACAACAATCAGATGAGGCGGCATCTGCTTGGCGCCGATCACGGCGAAGTGATTCTGGCCATCAATCGATCGGTGCCGATCTATATCAGCAAAAAAGTGACCATCGAGTGTTTAAAGTGTCATCAGGGCTTCCGTTTCAACATGGAGTTGCGCCAACATTCGCTGCGATGTGACAGTGCTAAGGGCGGCACAGCGTCTGATGAATACCAGTCAAGGTATCGATGTAAACTGTGTCCCGATGTGGTGCTCAAGTCAAAAATCGCCCTACAGAGGCATGAAAAGTTCAAGCACAACAAGAGATGCTACTACTGCTCCGTGTGCGGGGTGGACTTTGAAAATGCTGCTAAGGCTGTCAGCCACCGCAAGTCAAAGGTGCATAGAATTAAGTCAGCGGAGAAAATGAGTCGCTCGAAGAGGGAAACGACTACCAAGCCCCGAGATGACATCGGCGaggatttgcggtgtgaaaaatGCAATCATTTGTCCTCGTCAGACGTTGAGGCTATGCTGCATCAAATAACTCACCCCGATGGATGCACGAAGAAGGCGATAGAACCTCCAATAGAAGCAACACTCGACGGCTCCCAGAAGTGCACCCACTGCATCAAGGCGTTCAACACCAAGGCCGATCTGAAATCCCATCTAAACTCGGTCCATCCAGAGATAAAGCACGTGTGTCCATTATGCGGAGAGGCTTTCACCCTGCCCCGTGAGCTCGGCTGTCATAAAAGGTACCAAATGTGCGCGCCGCCGCCGACTTCGCAACCACCCACCGCGTCCACATCAAAGGTTGCTGTGGAAAAATCGTATCCATGTTCCGATTGTACATTTAGTTCTGCCTATGAGTCGGAGCTCATATTCCATCGGATTATCCACACCGAGGGTGTGGAGGCGCTTCAATTGAATGAAAAGCTGAAATGTCCACTCTGTGAGAGATCCTTTACGAAGCATTCGCTGCGGTATCACTTGCGCCAGCATACCAACGAGAAGATGTTCGTGTGCGAAATCTGCAATGGGTCATTCTCCCGCCGGCACAATTATAAGGATCACATGCAGTATGTCCACGGCGTCGGGGGTGACAAACAGCGAAAGCCTCGTCGGAATGAACGCTTTGTATGCGATACATGCGGCAAGACTTTTACGGCCAAaCACACTCTGCAAATGCATATGAACGTTCACATGGGACGTGATAAGAAATTTATGTGCACCATGGAGGACTGTCAATATATTGGACGGAATGAAAGAGCACTGAAAATGCACACAATCACGCATGCCCTGGAGATGGATTTCAAGTGCCCAGAGAAGGGTTGTAATTACAGAGGGAAGTCTGAGAGTTATTTGAAGAGGCATCAGAAAATTCATATGGACATTGACAAAGTCTACAAGTGTCCTGAATGTGATTTTAAGGCAAAGCTACCAGCTCATATCAGGCGTCATGTTCGAGTGCATACTGGAGAATGTCCCTACAAGTGTCCGCATTGTGACTACAAGAGTGGTTATATTGAAAACCTACGCAAACATATCCTAACTACAAAGAAACATCCGGGAAAATTCATCTATCAATGTGTCAAATGTGATCCAGCGGAGCCGTATAAAACTAATTTCAGTGCAGACTATCAGATGCATTTGACATCGGCACATCTATCCTGA
Protein Sequence: MLEEDLDDTHLCIKCSATIVGLDNYIQHRKTNCGSKATAGYGEFEYPDATNYPKTEVEASGGKASKSLNDPYDLSYEPGADVFFSSLQLQSVQASSGGKASSSAQQILTRKATATLLSSGRDEAGGGGEWQEEAPTNNTDNLMKVVRDIGETKKFEPIFKPIAFAHGSPEPEQSDDEDDDDEEFDDDDDDDEDYVPTPYSGGKWKPGSQPAPRSGGKWKSRAQPAAPIPATHTGGKWNFKSAKCKTADKPMPETSSDRLLSQIRAKLKPTCGYIPKEAAEGFASPEVHPEAGGKWKPGFSKFPPSAKWKSSDGQESPEVLEAQTGGKWKPGHGPSTGDKWKPGGSKTLKLLLPPLSGAKGKQREENQSPEILETQTGGKWKPGHGPTTGGKWKPEDRPADLKISQEPEPEPPAWDDQEPWGEDVGDTHPPLEHTKGKWVPGTKVERLEYKEEVLPPPQDFWCNICCRKLKTKTIYEKHLKSGVHSRKSETEQQLERAAVEQLELSQQILRPPALLLERAPSPEPDPDKRKRRKTFIKCELCKHRMQRYLVGKHLISHYHYVRMSMNPKVSFNMILDNIHAIVLQSPFQCSPCRFYANTEENFLNHWNSVEHRDRTEGPGKFWCSFCRFECEDNNQMRRHLLGADHGEVILAINRSVPIYISKKVTIECLKCHQGFRFNMELRQHSLRCDSAKGGTASDEYQSRYRCKLCPDVVLKSKIALQRHEKFKHNKRCYYCSVCGVDFENAAKAVSHRKSKVHRIKSAEKMSRSKRETTTKPRDDIGEDLRCEKCNHLSSSDVEAMLHQITHPDGCTKKAIEPPIEATLDGSQKCTHCIKAFNTKADLKSHLNSVHPEIKHVCPLCGEAFTLPRELGCHKRYQMCAPPPTSQPPTASTSKVAVEKSYPCSDCTFSSAYESELIFHRIIHTEGVEALQLNEKLKCPLCERSFTKHSLRYHLRQHTNEKMFVCEICNGSFSRRHNYKDHMQYVHGVGGDKQRKPRRNERFVCDTCGKTFTAKHTLQMHMNVHMGRDKKFMCTMEDCQYIGRNERALKMHTITHALEMDFKCPEKGCNYRGKSESYLKRHQKIHMDIDKVYKCPECDFKAKLPAHIRRHVRVHTGECPYKCPHCDYKSGYIENLRKHILTTKKHPGKFIYQCVKCDPAEPYKTNFSADYQMHLTSAHLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00312116;
90% Identity: -
80% Identity: -