Basic Information

Insect: Cheilosia soror
Gene Symbol: -
Assembly: GCA_948107745.1
Location: OX443561.1:68747868-68753673[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.035 4.1 8.7 1.1 2 20 1142 1160 1141 1162 0.93

2 8 0.00082 0.096 13.9 2.8 1 23 1169 1191 1169 1191 0.99

3 8 0.0044 0.51 11.6 1.3 1 23 1195 1217 1195 1217 0.98

4 8 1.5e-05 0.0017 19.4 2.5 1 23 1223 1245 1223 1245 0.99

5 8 6.4e-06 0.00075 20.5 0.6 2 23 1252 1273 1251 1273 0.97

6 8 0.0012 0.15 13.3 3.8 1 23 1279 1301 1279 1301 0.98

7 8 0.0016 0.19 12.9 0.5 1 19 1307 1325 1307 1329 0.93

8 8 0.00026 0.03 15.4 0.7 1 23 1335 1357 1335 1357 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.035	4.1	8.7	1.1	2	20	1142	1160	1141	1162	0.93
2	8	0.00082	0.096	13.9	2.8	1	23	1169	1191	1169	1191	0.99
3	8	0.0044	0.51	11.6	1.3	1	23	1195	1217	1195	1217	0.98
4	8	1.5e-05	0.0017	19.4	2.5	1	23	1223	1245	1223	1245	0.99
5	8	6.4e-06	0.00075	20.5	0.6	2	23	1252	1273	1251	1273	0.97
6	8	0.0012	0.15	13.3	3.8	1	23	1279	1301	1279	1301	0.98
7	8	0.0016	0.19	12.9	0.5	1	19	1307	1325	1307	1329	0.93
8	8	0.00026	0.03	15.4	0.7	1	23	1335	1357	1335	1357	0.96

Sequence Information

Coding Sequence: ATGGCTAGCGCTGCAGTATCAACTCCCGTTGAGTATAATCCACCAATGTGTACCAGGCATTGTGGAGAAATTCACTGCTCCGAGACGTTAGACGAATTTTTAATAAACTGCACAACCTGTATGCAGGAATTCAACTTGCTCAGCTGCAATTTGTTTATTAAACACGTTAAGGAATGTATAACTACTACAAACATCGTAAATGAAAATGGAAATCATCAAAATACAAAGTATGctattgaaaacatatttacTGCTGCTGTGAGGGACGACAATGTTGATGTTCAAAATGAGGAGGAGGATCATGGTTTCGACCCACTTATGTCTTTGAAAGTAGAAATTGGGGCATGCGAACCAGTATATGAACAGAATTCGGAAGATGTGGAACGTCTATCTGATTACAAAGACGAGGACGATCTAACCATTGATAAATTAGCCAGTCGCAATTTGATCGAAGGCATTATcaatgaatacaaaaagcaccccgAATTGTGGGattcaaattttaaatactGCTCGACGCAAGCCGTTAAACATCTTCATTACAAACAAATCAGACAAGCTATTAATTCgaaattcaaaacaaatctAAATCATCTCCAGCTTCGCAACCAGATTTTGAACTTAAAAAGTGGTTATAGACGAGCTCTCCAACGAAATAACCAATCCAAAAGGAATCCAAAACTGTGGTATTTCGATAAAATTGCTTTTATCGACGACGACACTCGGGATCAGGGCTGCAATCCTAAAACAGAAATCCACGATAATGAGCAGTCTTTTGATGAATCAACAAATGAACATTCTCAACAAGAACTGACCACCGAAAACCAAAAATTTCATGACCGAAAACTTATATTGGACATCATAAATCAGTACAAAAAGTATAGATTCTTATGGGACGTCAGTGCGGATAGTCACAACAATAAATCTAAACGAAATGAGGCTTTTTGCAACATTGCAAATTTTATCCAGAGAAAATATAAGATGAATGTTACTTCAAATGACATATCTACGAAGATCATGCACCTTCGCAGTGGCTACAGATCAGCACTTCGACGACCATTTAAACCCATAACGTTGTGGTACTATGATGAGTTATCATTCGTATTCGACAAGAAGACTCAACAATCGGAAGATAATTCTCAGGTATTAGAGGAAGCCCCAATCGAAGTAATGGCACTAAATAAATTCAAGGCCGAACCGCAGTCCAACCAATCATTCGATGAAACACAGGCATATGAGAATGAAGATCAACAATCAAACGATGGTCTGTCCAACCAAAAATTAGTACTAAGCCTGATCGAAGAGTACGAAAAACATCCCTGTTTGTGGAATAATGAGCTCTACAAAGCCAGCACTCCTTCCTCTCTTAACCGAGCGAACCGACTCATTACAATCGCTATTAATACAAAATTCAATAGCAACTTCCACGAAAAAGAGATTCGCGACAAAATTATCATGTTAAGGAACAGCTACAGACGTGCTCTACGCAACAAAGAAGCCTTTGAGAAGGATAGTTCAAAGCCCAAATGCGACTTTGACATCGACCTATATTACTTCGAGAAACTTTCTTTTATTGGAGCGGCAAGCAGTGATACAGTGCTCTCACGGAAGCCAAAACAGACAATGGATGACGAGAAAATGTTGATTGATAGTGACAAAGATCCAAGCACGGAAATGAAAGCTAAGGAGCAATCTGACGTGGATGACGAACCTAGGCTGCATCAACCCAGGGAATCCCTAACAGACAAACAAGCACCAAGTGAATTGAAAGAGGAACCATTCCCCAACCAGCTCCACAATGAAACTGAAGGCTACGAGACACTAGATGAAGAGCAGAAGTCCGACTATTCTGATGACGATACTGACGGAAACGATTTTGGCCTTAACAATAGAAATGTAGTATTAAGCCTTATAGCGGAATACAAGCAACATAAATGTCTGTGGGACTCTAATGTCTACAATACCAGCAGTCCCACTATCCGCAACCGCGCATTCCAAGCAATAACGACTGCCGTTAAtgccaaatttaataaaacctTCACCCAATCAGAGATTGTGTACAAGATCAAGCAACTAAAGGGGAATTACATGCGTGTTCTACGCCAGAAGGAGGAAAGCGAGCAAAACCCTTTAGATGCGAATGAAAAAATCGATATAAACTTGTACTACTTCGATGACTTGTCATTTATTGGGGCCACGGGCCGTGATACAGTGGTGAGAACAGCAGTTGATAGTGATGATGACTCAATTACGGAAAAAACAACTAATGCTCAATCCTACTATAATGGATCCAAGCCGTACAATGGAAAGCTCACTGAGAACAAAGAGCTCTTAACCTGCATCATAGAGGAGTACAAGACGCACCGCTGTTTGTGGTTTTCAAAACAGTACAACAAAAACACCTCAGTTCGAAAAGTTATCTATGAAAAAATCTGTGAAAGAGTCAACAGCAAGTTCGATACGACATTTACTGTTAAGGCACTCTGCTATGAGATACGGCGAATACGGACCAATTACTTCCGGATGCTGAGCCGAAAACGGCGAAATCCGTCTTACAAAAAGAGAATCTGGTACTCGGATATGTTGTCTTTTCTAGTCAGAGATGATGCGGTCAATAAGCCAAACCCCCGACGTGGTCTTGAGACTATTTCCAATGATGACGACTACCTAACAGATTCGACTTGGAATGACGAAGGAAACGTCCAAGGAAGATACACGACAAAGAAACTAAAGaaacaAGATATAATTACTATTATCGAGCTTTACAAGGCTGCGCCGATATTATGGGACACCAATCAACCACGGTTCACTATGCGCAATGAGCGAAAGAAAGCTTTCGACAATATTCTCTCAAGCCTATCCCAGGAATTCTACATAACAGCCGATGAACTCCGTTACCAGATTCGTTATATTCGCGAATCATACTTTCGCGTTCTACGGAGTGAGATCGCCATCAGAGAAGGAGATATAAGTAAATACCCCaagaaggtttttttccacGATCGAATGTCCTTCCTAGAACCGTTTTTAAAGAAGAAGCAATCAACTGCGCCTCTACTACAAATAGACACCAATCCAGAACCCAGCGAAGACTTTACATATCTAACCGAAAACAGACAGCTCATGATCAGCTTTATAGAACTCTACAAGGAGCAGGGTTGCCTGTGGGATCAAAAGCACAAAGACGTGAACAATCCAACAGCTGAGTCAGAATCGTACGATAAAATGATTAATATGTTTCAAGAAAGTGGCATCATTTTGACAAAGGAACAAGTCACATCGGCAATTAGCTTCCTTCATTCAACCGTTGTGAGCACACAAAAGGCCTTCGAAGCGGACGACATAAACGAAACAAGTAAGAACCCGGTTTGGTTCTATGAACACCTCAATTTTCTCGGTAAGATTCCCCGGATCATCGAAAAATATTGTACTCACTGCAACCAAGATTTCCGTACGTTACGCGAATATGAGCAACATAAAATCGAAATAGCTGGCGACTTCCCCTACAAGTGTAACATATGTAATAAGGGCTTCTTGTCACGTTCCAAATACCAATACCATCAGCTTACCCACAGGCAACCACATAAATGTGAGCTGTGTGACTTTCAGGCGGCCGATAAGAACAATTTCCAGGTGCACATGCTCCGGCACAAGGGCATCAAGCCATACCGGTGTGAGCACTGCGAGAAAGGATTCTTCACCTCATCCGAACTTGGGCGGCATTTGAAAATGCACACGGGTGAAAAGCCCATTGTGTGTGATATTTGCGGCAGTACGTATACATCCACATCTACACTGCAACGGCACATGAAGCGCCACAGAAACCAACGAGATCACAAGTGTGAATTGTGCGGCAATGCTTTTTTCTCGTCGAAATGCCTACGGGATCATATGGCCACACATTCGGATGAACGGAAACACATTTGTGAGATCTGCGGTGCAGCATTTAAACgaaggaaaacacttttgcagcACAAGCCACTGCATGCCGAGCTGAAGAGGCACGCCTGTAAAATCTGCGGGAAACTGTTTGCCCAAAAAGCGGGAGTGTACTCGCACATGAAATCGCACGGTCTGATAATTGGGAATAGTTAA
Protein Sequence: MASAAVSTPVEYNPPMCTRHCGEIHCSETLDEFLINCTTCMQEFNLLSCNLFIKHVKECITTTNIVNENGNHQNTKYAIENIFTAAVRDDNVDVQNEEEDHGFDPLMSLKVEIGACEPVYEQNSEDVERLSDYKDEDDLTIDKLASRNLIEGIINEYKKHPELWDSNFKYCSTQAVKHLHYKQIRQAINSKFKTNLNHLQLRNQILNLKSGYRRALQRNNQSKRNPKLWYFDKIAFIDDDTRDQGCNPKTEIHDNEQSFDESTNEHSQQELTTENQKFHDRKLILDIINQYKKYRFLWDVSADSHNNKSKRNEAFCNIANFIQRKYKMNVTSNDISTKIMHLRSGYRSALRRPFKPITLWYYDELSFVFDKKTQQSEDNSQVLEEAPIEVMALNKFKAEPQSNQSFDETQAYENEDQQSNDGLSNQKLVLSLIEEYEKHPCLWNNELYKASTPSSLNRANRLITIAINTKFNSNFHEKEIRDKIIMLRNSYRRALRNKEAFEKDSSKPKCDFDIDLYYFEKLSFIGAASSDTVLSRKPKQTMDDEKMLIDSDKDPSTEMKAKEQSDVDDEPRLHQPRESLTDKQAPSELKEEPFPNQLHNETEGYETLDEEQKSDYSDDDTDGNDFGLNNRNVVLSLIAEYKQHKCLWDSNVYNTSSPTIRNRAFQAITTAVNAKFNKTFTQSEIVYKIKQLKGNYMRVLRQKEESEQNPLDANEKIDINLYYFDDLSFIGATGRDTVVRTAVDSDDDSITEKTTNAQSYYNGSKPYNGKLTENKELLTCIIEEYKTHRCLWFSKQYNKNTSVRKVIYEKICERVNSKFDTTFTVKALCYEIRRIRTNYFRMLSRKRRNPSYKKRIWYSDMLSFLVRDDAVNKPNPRRGLETISNDDDYLTDSTWNDEGNVQGRYTTKKLKKQDIITIIELYKAAPILWDTNQPRFTMRNERKKAFDNILSSLSQEFYITADELRYQIRYIRESYFRVLRSEIAIREGDISKYPKKVFFHDRMSFLEPFLKKKQSTAPLLQIDTNPEPSEDFTYLTENRQLMISFIELYKEQGCLWDQKHKDVNNPTAESESYDKMINMFQESGIILTKEQVTSAISFLHSTVVSTQKAFEADDINETSKNPVWFYEHLNFLGKIPRIIEKYCTHCNQDFRTLREYEQHKIEIAGDFPYKCNICNKGFLSRSKYQYHQLTHRQPHKCELCDFQAADKNNFQVHMLRHKGIKPYRCEHCEKGFFTSSELGRHLKMHTGEKPIVCDICGSTYTSTSTLQRHMKRHRNQRDHKCELCGNAFFSSKCLRDHMATHSDERKHICEICGAAFKRRKTLLQHKPLHAELKRHACKICGKLFAQKAGVYSHMKSHGLIIGNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -