Csor021596.1
Basic Information
- Insect
- Cheilosia soror
- Gene Symbol
- ZBTB41
- Assembly
- GCA_948107745.1
- Location
- OX443563.1:103598766-103623526[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.33 38 5.7 0.2 2 23 50 71 49 71 0.96 2 20 0.00019 0.023 15.8 0.8 1 23 76 99 76 99 0.97 3 20 8 9.3e+02 1.3 4.5 1 23 110 132 110 132 0.84 4 20 0.32 37 5.7 2.1 1 23 154 176 154 176 0.97 5 20 0.00067 0.078 14.1 0.1 1 23 182 204 182 204 0.99 6 20 4.5e-05 0.0053 17.8 5.0 1 23 210 232 210 232 0.98 7 20 0.0073 0.85 10.9 2.9 1 23 459 481 459 481 0.97 8 20 4.9e-05 0.0057 17.7 0.4 1 23 487 509 487 509 0.98 9 20 6.2e-06 0.00073 20.5 4.6 1 23 515 537 515 537 0.98 10 20 0.3 36 5.8 5.2 1 23 543 566 543 566 0.90 11 20 0.033 3.9 8.8 0.5 2 23 1161 1182 1160 1182 0.96 12 20 0.21 25 6.3 1.5 1 23 1187 1209 1187 1209 0.97 13 20 6.3e-06 0.00073 20.5 1.8 1 23 1216 1239 1216 1239 0.97 14 20 0.00029 0.034 15.3 1.6 1 23 1245 1267 1245 1267 0.98 15 20 0.027 3.2 9.1 3.6 2 23 1274 1295 1273 1295 0.95 16 20 2.6 3.1e+02 2.8 6.1 1 23 1319 1341 1319 1341 0.98 17 20 0.00023 0.028 15.6 5.6 1 23 1347 1369 1347 1369 0.98 18 20 1.2e-05 0.0014 19.6 4.0 1 23 1375 1397 1375 1397 0.97 19 20 0.00013 0.015 16.4 3.4 1 23 1403 1425 1403 1425 0.98 20 20 0.00067 0.079 14.1 2.4 1 23 1431 1453 1431 1453 0.97
Sequence Information
- Coding Sequence
- ATGGTCTATAAGTGCACAGCCTGCGAAAAGATCAGCAACTGCTACGAAGAACACGTTAAGCACATTGTCATCCATGAAGCTCCAGTGGACAGCCTCACAGCGACAACATCTCTGGAAAAGCTGAAGAAAACTCCAAGTGGCTTTCTAAAATGCGATTTATGTGATGGAATCTTTATGAGTGATCGTGAATACGCACGCCACGAAAAAATGCACGTAGAGCAAGTCTTCCAGTGCGATATATGCAAAGCATTCCTGGCCAATAAGTCCAGTCTGAGAAAGCATCAAATTAGGATGCACAAAAGGCAAACACCAAAAAAAGAAGTACAGTTCGAGTGTGTTACTTGCAATCAGAAATTTGCGTCAATGCTTCTCATGGTACATCACAAGAAATGCCACACGGACGTGATCAAGAAAATTGAGCAGATGACAATCATTAAGAGGGGTGAAGGAAAAACCCTTTACGTATGTAAAATTTGCGCAAAGacatcaaacaacaaataccGTCACGAAGAACATTTACGAATTCATACAAAAGAGAAACCATACAAATGTGAGCAGTGCGGAGTTAGTATTGCGACTGCTAATGCGCTGGCGCATCATTTGCGTTTGCATGAGAACGACAGACCATTTGAATGCGATGTCTGCGGGGCGACATATCGTCATAAGAAGAGTTTGAAAAAACACCTAAGACACCACACGGGCGAAAAGCCATTCAAGTGTCGTTGCTGCGAGAGAACATTTGTATTCAATTACACGCGAGCGGACCACGAGCGCAAATGCCATTTGGGTGATCCAAAGATACCCAAATTGCGCCGGCAACGGAGTGGTAAAATAATACAGAAATTGAATCGTGAGACCGGTGTGCCAAAAAATGTGATCGGTAATGAGGAAATAAACGAAATCAAAATTATAGACTCGGAAAATGCCATAAATGATTGCAACAATACCAAGTGTGAGAGCTGTAAGTCCCTTTTGCCAGATGAAAACTCGTCTGCGATTGGTGAATGGGAGAACGATTTCCGATTTATTGAAGAAGCAGAGTTGAAAGGTGAAATTTATAATCTCGAAAGTATCGATGGACCCCTTTGGAAATTGGAACCGTGTGAGGTTATTGAACAGTTCATAAAAGAAGAGCCTGAGGTTCAGATAGAACCAGACATAGTCAACGAagatCATGTAGAAGTAGGTAATGTGCTTAAAGACGAACCGGCGGATGCAGCTGGGTACAAACATTGGTGTAGTCAATGCACAAAGTGTCCCATTCACAGATTTCCTCTTCAAATTCTGATGATCAATCACAAGAAAACCCATACAGAGGATGCTCAACTCCTTGAAGATACAGCAACAATCCGTAAGGAGGGTAGTCGAATAAGTTACATCTGCAAAATGTGCGGTAAATCATCGACTAATAAATCTCGCCACACCGAACATCTTAGGGTACACACAAAGGAGAAGCCATTCCAATGTGATTTGTGTGGAGCTGCATTTACCGCACGCGGATCGTTAACGCATCATTTACGTTTGCACTCGGATGATAGACCGTTCAAATGTAATATATGTGATGTGACTTATCGTCACAAGAAAAATCTAAGGAGACACTTGCTTAAGCATACAGGCGAGAGGCCTCATAAATGTCTATATTGTGGTAAACGGTTTTCCCTAAAATGTACCAAAGTTGATCATGAGCGGCAAGTGCACACAGGTGAAACACCTTATAAATCAGAAGGCGGTGAAATTTCCGAAAATATTTGTTGGGACTGTGAGGATACGTTACTGGGCTTCCACAAAAGTGTTGGCGATGATAACGACGACGAAGAGGAGCCTGTAGTTGTTGACGACGACGAAATCCTATACAAAAACTTGGAGAAAACAATACGCATTCACCGTCTGTCGAAAGaggttgaaattattaaaattgaatCTTCTGAATCCGAGGATGAAGGCTGTTTTACAATCCCAAAAGAAGACAATATTATAACAGTTGAAGCGGCAAGTACGATTGTCGGTATCTCGAAAAATCGTGGCGGCGCACTAGTTGCTGTAGTGAAGAAGAACACTTCCGACGAAATAAAATTCGATCAGAACCTTAAAAAAGATATGTTTACAAGAGCTAAAATATTCGAGAGTATGAGGTGTCCCCTGTGTCCATACCTATCTGGTATCGAGTGTGAAGTGGTATTCCACATTCGTCAAAATCATCCTCACTACACAGGAGAGCACCTACGTTTCGATCAACAGGAGGGCGACACTTCTCTTACCAGAAGGATAATATTCGCCCGGATGTTGACATTTTTCGAGTGCAAAGCATGTGGGAAAATTCATGACAGATTTTGGGCCCACAGGAAACATCTTACTGTCCACGATCggaaaaatctgaaaatgaaaatcgaCGACAACACTGCCTTGAACAACGAAGTATTAATCTCTCATAACAACGTGCATAAAATACAAACCTCTAAACGTGCCTTAGATACTGTAGAATATAATCGCGAAGCAAAGAATCCCAAACTGGAAGACAAGGTCGTACGCAGAGCTTCAAAGGACAACAATTCCATGGAAACGAATAAAGTTACAACGGCGGATGTCTCGCTATCTTTGGAGAAcgcagcaaaaaaacaaaaaaatcacagCGCCAATAAAAAATCCAAATCCAAGGGTCTCTTGCGAAAACAGCAAAAGTTACAAGCTAGGCGCGAGAAGAGACGCCAAAAACGAGACGAAGAGAAGAGAGCACAAGCAAAAAGTGAACCTACATCGGTAATTCCAAAGCCAACTTTTAAAATGCCTCAACAACCAGCTCCACGCGCCTCTTCAGTAGTCAAGCAATTATTAAGCCAGCCTAGGTATACCTCCATGACACTTGAAATATGCCGCATTTGTGGCACCACAGAAAatcttaaacatatttttcaagaaGGTGATGATGAACTTCTGGATCAAATCAGGCTATGCGTCAACATCCACATTGATGCGCTCGATAGCCTGCCGAAGTTTGTATGCAACGCATGTGAGCACGGTCTGGCATTTTCATATCGTCTTCGCAAGCGTGGCgaagaaacagaaaaaatactTCGTCAAGAACTCCTTGGTTCAACCAACAGTGTACCTTACCATTTAGCCGAAGACAATACGAATGATATTGACGATGTGTTCATGGAAGAATTACAAGAAGAATTGTGGATCAAGGATGAAGTTGACAATAGTGTGCACTTGAATGACGATCAGGACTTTATTGAACGTGATGAAGATTCTGATGAAGGCAATATAACGAAGGAATCATGCGATGAAAGTGAGCAGTGGTTAGTGCAAGATGATGGTCTCATCGAAAATACTGAAACGATGAGAGATTCCGATATGAAAGAAGCTAAAGAGGAGCTGGAGCATATGAAGCAATTAGATGACAACACTTTGGTGAAAAACGAATTCAATCATACCGAATCACAGAGTCTGGATGGCAAAAATACCAACACAACCCAAATCGAATGTGAAACCTGCGCAGAAGTATTCCAAACTAGAACAAAATATTTCCAGCATATAAAGGAGCACGGTGATAGAAGGTACCATTGCGTGGTCTGCGATAAGTGGTTTAGTCGTCTATACGTTTTTGATCAGCACATACAGAATCATTACAGTAAGACAGGAGCTTTTCCCTGTCAAAAGTGCAACAAAAGCTACACAAATCACTGGAACTTAGAACGTCACGCTCGATCGGCGCACCGTGGAGAGAAGGGTTTTCGTTGTGGACAATGCAACTCGAGTTTTAGCAGATCAGATGTACTAAAAATGCACATGACTAAGCACTTCTCCGATAGGAACATCGAATGTGATATTTGTGAAAAGAAatttaaGACATCTCAGAGTTTGCATTTTCACAAGAAATCTCATCTGTCGAAATCCGAACGACCTAAGAAACCCATTCGAATAAAACATAAAGCAAAGACGAAAATCGAATTGTATATATGTGATGTCTGCGAAAAGGTTTCTCATCACAGAACAACGCATTTGTCCCACATGAGGACACATACTGGCGAGCGACCGTACCATTGCAGCGAATGTGATAAGTCATTTAAAACGTCTCACGCCAGATCATCGCACATGTTGACACATACGGACCAGCGTCCACACGAGTGTAAAACCTGTGGTACATCCTTTCGGCAAACGGCTCACCTTAAGTCACACATGCTAATTCACGAAGGTGTTAAAACACATGTATGCGAAGTTTGCAATAAAGCGTTTAGAATGAAATGCAATCTGATAGTACACTCGAGGACGCATACGGGCGAGCTGCCATACAAATGTAATAAGTGCCCTGAAAAATTCATTCGTCTTACCCAAGTCAAACGACACAATAAGAACCACACGAGTGCGAAAAAAGTGCAACATGAGCTCTGCAATGGGAATGCACACGAAATGGAAAGTGACTTAAATAATTCGCAAATAAGCTTGTACGTAGATGATATTATTGAAATTAGTCCTACTAATAGCTCTGCCAGTATTGTTATATCTGATTGTGTAGTACAAAATGTccatgtaaattaa
- Protein Sequence
- MVYKCTACEKISNCYEEHVKHIVIHEAPVDSLTATTSLEKLKKTPSGFLKCDLCDGIFMSDREYARHEKMHVEQVFQCDICKAFLANKSSLRKHQIRMHKRQTPKKEVQFECVTCNQKFASMLLMVHHKKCHTDVIKKIEQMTIIKRGEGKTLYVCKICAKTSNNKYRHEEHLRIHTKEKPYKCEQCGVSIATANALAHHLRLHENDRPFECDVCGATYRHKKSLKKHLRHHTGEKPFKCRCCERTFVFNYTRADHERKCHLGDPKIPKLRRQRSGKIIQKLNRETGVPKNVIGNEEINEIKIIDSENAINDCNNTKCESCKSLLPDENSSAIGEWENDFRFIEEAELKGEIYNLESIDGPLWKLEPCEVIEQFIKEEPEVQIEPDIVNEDHVEVGNVLKDEPADAAGYKHWCSQCTKCPIHRFPLQILMINHKKTHTEDAQLLEDTATIRKEGSRISYICKMCGKSSTNKSRHTEHLRVHTKEKPFQCDLCGAAFTARGSLTHHLRLHSDDRPFKCNICDVTYRHKKNLRRHLLKHTGERPHKCLYCGKRFSLKCTKVDHERQVHTGETPYKSEGGEISENICWDCEDTLLGFHKSVGDDNDDEEEPVVVDDDEILYKNLEKTIRIHRLSKEVEIIKIESSESEDEGCFTIPKEDNIITVEAASTIVGISKNRGGALVAVVKKNTSDEIKFDQNLKKDMFTRAKIFESMRCPLCPYLSGIECEVVFHIRQNHPHYTGEHLRFDQQEGDTSLTRRIIFARMLTFFECKACGKIHDRFWAHRKHLTVHDRKNLKMKIDDNTALNNEVLISHNNVHKIQTSKRALDTVEYNREAKNPKLEDKVVRRASKDNNSMETNKVTTADVSLSLENAAKKQKNHSANKKSKSKGLLRKQQKLQARREKRRQKRDEEKRAQAKSEPTSVIPKPTFKMPQQPAPRASSVVKQLLSQPRYTSMTLEICRICGTTENLKHIFQEGDDELLDQIRLCVNIHIDALDSLPKFVCNACEHGLAFSYRLRKRGEETEKILRQELLGSTNSVPYHLAEDNTNDIDDVFMEELQEELWIKDEVDNSVHLNDDQDFIERDEDSDEGNITKESCDESEQWLVQDDGLIENTETMRDSDMKEAKEELEHMKQLDDNTLVKNEFNHTESQSLDGKNTNTTQIECETCAEVFQTRTKYFQHIKEHGDRRYHCVVCDKWFSRLYVFDQHIQNHYSKTGAFPCQKCNKSYTNHWNLERHARSAHRGEKGFRCGQCNSSFSRSDVLKMHMTKHFSDRNIECDICEKKFKTSQSLHFHKKSHLSKSERPKKPIRIKHKAKTKIELYICDVCEKVSHHRTTHLSHMRTHTGERPYHCSECDKSFKTSHARSSHMLTHTDQRPHECKTCGTSFRQTAHLKSHMLIHEGVKTHVCEVCNKAFRMKCNLIVHSRTHTGELPYKCNKCPEKFIRLTQVKRHNKNHTSAKKVQHELCNGNAHEMESDLNNSQISLYVDDIIEISPTNSSASIVISDCVVQNVHVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -