Basic Information

Insect: Cheilosia soror
Gene Symbol: -
Assembly: GCA_948107745.1
Location: OX443564.1:71142258-71144243[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.4 46 5.4 1.1 1 23 164 189 164 189 0.89

2 12 0.00023 0.027 15.6 1.8 1 23 195 217 195 217 0.98

3 12 0.056 6.5 8.1 0.3 2 17 252 266 252 267 0.80

4 12 9.8e-05 0.011 16.8 4.9 1 23 281 303 281 303 0.98

5 12 0.00029 0.034 15.3 0.0 1 23 309 331 309 331 0.95

6 12 2.9e-07 3.4e-05 24.7 3.2 2 23 337 358 336 358 0.97

7 12 0.0013 0.15 13.3 0.6 2 23 366 388 365 388 0.91

8 12 0.00011 0.013 16.6 3.4 1 23 412 434 412 434 0.99

9 12 1e-06 0.00012 23.0 2.4 1 23 440 463 440 463 0.97

10 12 2e-07 2.3e-05 25.2 0.5 1 23 469 492 469 492 0.96

11 12 2.7e-05 0.0032 18.5 0.3 1 23 498 520 498 520 0.97

12 12 1.7e-05 0.002 19.2 4.0 1 23 526 548 526 548 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.4	46	5.4	1.1	1	23	164	189	164	189	0.89
2	12	0.00023	0.027	15.6	1.8	1	23	195	217	195	217	0.98
3	12	0.056	6.5	8.1	0.3	2	17	252	266	252	267	0.80
4	12	9.8e-05	0.011	16.8	4.9	1	23	281	303	281	303	0.98
5	12	0.00029	0.034	15.3	0.0	1	23	309	331	309	331	0.95
6	12	2.9e-07	3.4e-05	24.7	3.2	2	23	337	358	336	358	0.97
7	12	0.0013	0.15	13.3	0.6	2	23	366	388	365	388	0.91
8	12	0.00011	0.013	16.6	3.4	1	23	412	434	412	434	0.99
9	12	1e-06	0.00012	23.0	2.4	1	23	440	463	440	463	0.97
10	12	2e-07	2.3e-05	25.2	0.5	1	23	469	492	469	492	0.96
11	12	2.7e-05	0.0032	18.5	0.3	1	23	498	520	498	520	0.97
12	12	1.7e-05	0.002	19.2	4.0	1	23	526	548	526	548	0.99

Sequence Information

Coding Sequence: ATGTCTGAACAGGAGGATGGCTCGGATCTCTATCCAATGTACACCTCTACAGAATACCACAACGAATTGAAAATGGTCTTGGAGGAATTTGAAATATGGAATCTCAACATCGCACAAGGTGATGGCTTACCACAGAAGATTTGCCTTACTTGTTTTGACAGTTTCTGTCAAATACATAACTTCCGCATGATATGCCAAGAAGCACAAACGAATTTTGGTGAACTATGCATTGGACTGGATATCATAATCAAACTTGAAGCACAgtatgatgatgttgatgttgacTATCCAGAAGACTTCGAAGGTGAACAAACAATTACCGTTCAAGAGCACTACCAGTTCCCCACTGGGGAACCACAAACTGTTTCAGATAAGCCCGACAGCTTAAGAACATGTGAAAAGCTTTTGGAAGCACTAGATTCTGATGATGAATGTAAGATAAAAAAGGAACAGCAAAATGCGGATGCAAATATTTCCGAGCTAAAACAATATCAATGCGAATACTGCATGGATGTTGTCAATTTCGATGATCCAGAGCTGCTAAACCAGCATTATAATACCTTACACTCATCGGACGTTCCCTATCAGTGTCCGCAGTGTGAAAAGTGCTTTGACACAAAAGCAAAACGCAATGGCCATGCTAGAGTCCATTTTCGAGTAACACTCGATTGTGAAACCTGTGGCAGGAAAATTCGGGGCGGTAAGCGAATGATGGACCGACACATTGAGCTGCATCATGTCTTAAAGGTACGCGAGTGTACTATATGTGGCAAGAAGTTTGACAAAATCACTCTGAAGAGGTTTCACTACCACCAGAGTTGGCACGATGAAACTAAGTTGCACAAGTGCAAATATTGTGAGAAAAAGTTTATTCAAGTAACACATTTAGTAGTGCACGAGAGGACACACACCGGAGAGAACCCTTTCCTCTGCAGCGAATGTGGAATTGGATTTACAAATTCGGGCATTCTTGAGGCTCATATAAAAATGCACGGAGTGAAAGAGTTGCAATGCCCCAGCTGCCCGAAAACATTCTCGCATCAACATAACTTAAAGATCCACATGCAAATTCACGACCCTGATAGGAAAGGTTCGCGCTGCGAGATTTGCGCAAAGCCCTTCCGTTCCGCTATGAATTTACGTTTGCATAACTATAAACGACATGGTGCTCCAGCTACAACTGCTATTCTTAATATTTTGCAAAAGCGCGAGAAGTATGCGCTTATAAAGCCCTTCAGGTGTAATAAGTGTTCCGAATCTTTTGTTCTGCACACACAATTGGAGAAGCACGTGAAAACTCACAGCGAAATCAGGCCGTATTCATGCGATCAATGCGGAAAATCATTCAAGCGAGATTCTCATCTGAAGTTGCATGTGAATTCGCTTCACTTGAACAAGAAACCACACAAATGCTCTATCTGTGGATGGGCATTTCCACAAAAAAGCAACTTGAGGGAGCATATTGCTTCGAAACATGAAAATACGAAGGAGTTCAGTTGCGATGTATGTGGAAAGTCGTTTGCTATTGCGAAGACGCTCAAAATTCATAAGCTCAGACACTTGGACAAGAAATCATATACCTGCACCGTATGTAACAAGAGCTTCAGACTACACAATACCCTTAAGAATCACATTAATTCCCACTGGAGGAAGAACGAAGGAAAAGTAGTCACCGGTACTATAAAGAATGTTATCGTCTAG
Protein Sequence: MSEQEDGSDLYPMYTSTEYHNELKMVLEEFEIWNLNIAQGDGLPQKICLTCFDSFCQIHNFRMICQEAQTNFGELCIGLDIIIKLEAQYDDVDVDYPEDFEGEQTITVQEHYQFPTGEPQTVSDKPDSLRTCEKLLEALDSDDECKIKKEQQNADANISELKQYQCEYCMDVVNFDDPELLNQHYNTLHSSDVPYQCPQCEKCFDTKAKRNGHARVHFRVTLDCETCGRKIRGGKRMMDRHIELHHVLKVRECTICGKKFDKITLKRFHYHQSWHDETKLHKCKYCEKKFIQVTHLVVHERTHTGENPFLCSECGIGFTNSGILEAHIKMHGVKELQCPSCPKTFSHQHNLKIHMQIHDPDRKGSRCEICAKPFRSAMNLRLHNYKRHGAPATTAILNILQKREKYALIKPFRCNKCSESFVLHTQLEKHVKTHSEIRPYSCDQCGKSFKRDSHLKLHVNSLHLNKKPHKCSICGWAFPQKSNLREHIASKHENTKEFSCDVCGKSFAIAKTLKIHKLRHLDKKSYTCTVCNKSFRLHNTLKNHINSHWRKNEGKVVTGTIKNVIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -