Csor019561.1
Basic Information
- Insect
- Cheilosia soror
- Gene Symbol
- -
- Assembly
- GCA_948107745.1
- Location
- OX443563.1:63367287-63369206[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-10 7.1e-08 32.7 0.0 4 35 15 46 13 50 0.92
Sequence Information
- Coding Sequence
- ATGACGCCAAAACAGAATAAGCGCAAGGTCTGGGACAAATCGAGCATGCTGAAAGCTATCGCAGCCGTCAAGTCGAAAGAAATGGGCTTTAAGAAAGCAGCACAAATTTTTAATGTTCCTCGTACTACACTCTTCAGACTTTTTAGTTCGCCTTCCAATGAAGGTATCAACGTACCACTTGGCAGAAAAACGGTTCTGAGTACAGGCTTAGAGGAGCAACTCGTCCAGTACGTCCTTGGAATGGAAAAACGGTATTACGGCTTAACACGACGGGACATTAAAAGATTGGCTTTTCAGTTGGCTTGCCGAAACAACTTGGAGCACCCGTTTAAAAATGAAATGGCTGGCCGTAAATGGCTAAATGGATTTCTAACCCGACATAAGGACataatttctttgcgtaagccAACAGGGACATCATTCGCTAGAATGATTGGTTTTAGCAAGGAGAATGTGTCGTCTTTTTTTGACTTACTCGAGAAAGAGTATGAAGAAAACTTCTTTTCGGCGAATAGGATTTACAATGTAGATGAATCTGGGCTGTCCGTTGTCCAGTCTAAACAACCCCAAATTATTGCAGCCAAAGGAAAAAAGCAGATTGGTGCACTGACATCAGCCGAAAGGGGGCGTCTTATAACAATATGTTTATGTATAAATGCAGCCGGAGACTTTGTTCCTCCAATGATAGTCTTCCCCAGAGCAAGGTTGGATGTTAGGCTCATGAAGGGAGCTCCAGCAGGATCGATTGCTAAGTGTCATCCCTCTGGCTGGATACAGACAGATATTTTCTTTGAATGGTTTCAACACTTTTTGCAGTTTGCTAAGCCAACGAAAGAAAGTCCAGTCCTACTAATTTTAGACGGGCATTACAGCCATACGCGCAACATTGATCTCATAGATTCTGCGCGTGTAAACAATGTAACAATATTGTGTTTGCCACCCCATTCTACGCACAAAATGCAGCCTCTGGACAAAACGGTTATGGGGGCATTAAAAAGTTATTATAGTGAAGAAATCCGCCAGTGGCTGTTACAATCCGAAAGGCCTGTGAGCAACTATGATATTATGGAGCTGTTTGGAAAAGCATACCTAAGAATTCAAACCGCTTCACTAGCCGTTAATGGATTTAAAGCTACTGGGATCTATCCTCTTAACCGGAACATTTTTACCGAAGCCGATTTCTTAGACGAAGAGCAGGTCATTGAGCAGGAACATGTTCCACCGGTGGAAGATACACGCGCTAGTTCAAGCCTCCAAAGTCCTCAAATGTCCCAAAACTCTCCAAGCCTTTTTATAGGTCCGGAACTTATTTCACCTTTCCCCCctcttaagaaaaaaacatcaaataGGGGAAGGAAATCAGGTTTCTCATGTAAGATCACAGCATCACCATACAAAGCTGAACTGGAGATATCTAAAGCAACACAGAAGAAAAAGGACCAGGCTAAAAAAGGAGCAAATATATTCGACCAACCATCAACAAGCGGTGTGCAAATGAATAAAACGCAGAAAAAGTCTAAGAACAAACAGCAGCCAGATTCGTCTTTCTCATCAGAAGTTAATGACATTTCGGCAACATCAACTAATTTTGATCTACCATCAACGAGTGGCCTTCAAACGAAGAAGACGGTGAAAAAGTCTAAGAAAATAATTCAGCAGCCAGATTCGTCTTCTTCATCAGACTGTGATGATGACATTTCGCTTCACTCAGATTTTTCAACTGACTTTCTCCCATCTATTATTATTCAAAGAGGTGATCCTGATGGCGAGGCAGAGTGCGGTTTTTGTTTTGGATTGTTTAGCGATGATAAAGGCGGTGAGGAGTGGATACAATGTATGCCCTGCCTTAAATGGTACCACGTAGTTTGCTCGGGCGCAGAGTCTACTAATTTTATTTGCGACTTTTGtactacaaattaa
- Protein Sequence
- MTPKQNKRKVWDKSSMLKAIAAVKSKEMGFKKAAQIFNVPRTTLFRLFSSPSNEGINVPLGRKTVLSTGLEEQLVQYVLGMEKRYYGLTRRDIKRLAFQLACRNNLEHPFKNEMAGRKWLNGFLTRHKDIISLRKPTGTSFARMIGFSKENVSSFFDLLEKEYEENFFSANRIYNVDESGLSVVQSKQPQIIAAKGKKQIGALTSAERGRLITICLCINAAGDFVPPMIVFPRARLDVRLMKGAPAGSIAKCHPSGWIQTDIFFEWFQHFLQFAKPTKESPVLLILDGHYSHTRNIDLIDSARVNNVTILCLPPHSTHKMQPLDKTVMGALKSYYSEEIRQWLLQSERPVSNYDIMELFGKAYLRIQTASLAVNGFKATGIYPLNRNIFTEADFLDEEQVIEQEHVPPVEDTRASSSLQSPQMSQNSPSLFIGPELISPFPPLKKKTSNRGRKSGFSCKITASPYKAELEISKATQKKKDQAKKGANIFDQPSTSGVQMNKTQKKSKNKQQPDSSFSSEVNDISATSTNFDLPSTSGLQTKKTVKKSKKIIQQPDSSSSSDCDDDISLHSDFSTDFLPSIIIQRGDPDGEAECGFCFGLFSDDKGGEEWIQCMPCLKWYHVVCSGAESTNFICDFCTTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01253557; iTF_01253702; iTF_01253593; iTF_01253596; iTF_01253597; iTF_01300778; iTF_01253656;
- 90% Identity
- iTF_01300778; iTF_01253557; iTF_01253702; iTF_01253656; iTF_01253593; iTF_01253596; iTF_01253597;
- 80% Identity
- -