Csor026642.1
Basic Information
- Insect
- Cheilosia soror
- Gene Symbol
- -
- Assembly
- GCA_948107745.1
- Location
- OX443566.1:3905175-3907532[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-11 3e-08 33.9 0.0 5 41 19 55 17 58 0.90
Sequence Information
- Coding Sequence
- ATGAACGCTGAAACTGAAGGAAACGGTTCGAAAGGCTTATCGCGAAGTCATAAAATCAAGCTTGCATTGGAGGATATTCGGCAGAACGGTTTGAGCCACAGAAATGCTGCTTCCAAATACAATATCCCAAAGAGTACTTTGCAAGATAGGTTACATGGAAAAGTAGATGAGGAATGTGAGAAAAAAGGACCCGAATCTGTTTTGTATCCTGAAGAGGAAAAGGCTATAACGGACTGGTGCATTGATGTGGCTCAATGTGGCTTTCCTCTTAAGAAAACGGACCTTCTTGACACCGTTCAACGAATTCTTCAATCAGAACACCGCAATAACCCATTTAAAAACGATCGCCCAGGTAGAACATGGTTGAGATTGTTTTTTAAAAGGAATCCCTGCCTAAGCCTTCGAGAAGCTGAGACCATTTCTAAAGGCAGGGCAATTGTTACAGAAAATAACATTAGAAAATGGTTCAAAGATCTCCAgaattttttgaaagaaagaggAAATGAAGATGTACTACTTGACCCTAGGAGAATTATGAACGGAGACGAAACAAGTTTTTGCTTATGCCCGAAAACAGGAAAAGTCATCTCTCCAAAGGGTCACCGAAACGTTTACCAAATCCAAATGGCCAAAGAAAAAGATACTATCACAGTGTTAGCTATGATGACTGCTAGCGGGGAGCTTCTGCCGCCGTTAGTAATTTTTCCGTATATTCGGCCGCCTGCCGATATTGTCAGAAGCGTTCCAAAGGATTGGTTCTTAGGAAGAACCGAATCAGGATGGATGCGTAGCGAAACTTTTTTTGAATACATTGCTAACTGCGTCGACAATTGGATTGAAGAAAACAATGTTCCGAAACCAGTACTGCTGTTTGTAGACGGTCATAAGTCTCATTTGTCCATGCAACTAAGCCAACTTTGTcattcaaaaaatattattctttATGCGCTGCCACCAAACACCACCCATATCCTTCAACCAGCTGACGTCAGTGTGTTTAAGCCGCTGAAGCAAGATTGGCAGCAGACAGTACGAGAATGGCACATGAACAATATAGGAAAGGTTTTGACTCGTAAGGACTTTTGTCCACTTCTTGAAATTGTgctcacaaaaaataaaaatttaccggCCACTATAAGGAACGGATTTAGAAAGTGTGGACTTTTCCCATTTGATCCAAATGCTGTCGACTATGGAAAGTGTGTTCAAGACATGcttgaaaaagttacaaaatcTCATGCACCAAAAGATCTTTTGCCTACCGAACAAGATCGCTTTGCAATCGCTGCATCCGTAATAGTTGAAATAAAAAACGAACTGGAAATAAATGGGGTCAGTGTTGACATAGTATTGAAAACCTTAGAAAGTGCAAAATCGAAATTTAATCCAACGCCAGCGCCAGAACTCATCGACCTTTCCTCAATTCCGATTAACATCGTTTTTGATTTGAACGAAGATGGAACGCTCGAGGTTGCTGACGAAAATCTGAACAATAACTCGTTTTCTGATCTTACTGGCATATTAAATGAAATACCGGAAGGCGCATCTTCATCCTCACTAGTTAACTATCTGGGCACACCCACTTCATCAAAAAGATCCCCACTTGCCCCCATAACTTTGCCAGAACcaaatgtttttgaaaatccacaaaatttaaaatctacTGAAAATCAATTAACCACATCAACAACACGGATAACTTCTTCAATAGTTCCTGTTTCTCCACTTGCCCCCCTAACTTTGGCAGAgccaaatatttttcaaaatccaGGTTCCACTTCTAATTTTACTGATCTAAAATCAACTGAAAACCAATTAACCACATCAACAACACCGATGACTTCTCCAATAGTTCCTGTTTATATTAATAAAACACTGATTTCATCAAACGACAGATCACCATCCTGTTCACCATGCAGATCTCGTTCTCCGCTTGCTTTGTCGAAGCATTTGTTTTATCCCCACCCTTTTAAGAAAATGAGTAGGACTTCTACACAGCCTTGCAGGTCTCCCAGCGCAATTTCTTCGCAGGCTTGGAGGGACATATACGAGCGTAAAGAGCGAGCgaagaaagaaaaaatcgaTGCTGTCGAAAAGAGGAAAGACGAAAggctacgaaaaaaaaatgaaaaagaagctAAAAAGTCAATGGGACAAAaacgaaaaggaaaaaaaaaagtaatcaatTGCGAAAAATGTAAAGAGCTACTTATAAGCGATACCGAAGAGGACGATTTGAAAAACATAGGTTGTGATACATGCCCTCGTTGGTATCACTTAAAGTGCAGCTCAATCAGCTTCCTGGGATACAATGAGGCTATTCAAATGGACTTCATCTGTGATATTTGTCTAGACTAA
- Protein Sequence
- MNAETEGNGSKGLSRSHKIKLALEDIRQNGLSHRNAASKYNIPKSTLQDRLHGKVDEECEKKGPESVLYPEEEKAITDWCIDVAQCGFPLKKTDLLDTVQRILQSEHRNNPFKNDRPGRTWLRLFFKRNPCLSLREAETISKGRAIVTENNIRKWFKDLQNFLKERGNEDVLLDPRRIMNGDETSFCLCPKTGKVISPKGHRNVYQIQMAKEKDTITVLAMMTASGELLPPLVIFPYIRPPADIVRSVPKDWFLGRTESGWMRSETFFEYIANCVDNWIEENNVPKPVLLFVDGHKSHLSMQLSQLCHSKNIILYALPPNTTHILQPADVSVFKPLKQDWQQTVREWHMNNIGKVLTRKDFCPLLEIVLTKNKNLPATIRNGFRKCGLFPFDPNAVDYGKCVQDMLEKVTKSHAPKDLLPTEQDRFAIAASVIVEIKNELEINGVSVDIVLKTLESAKSKFNPTPAPELIDLSSIPINIVFDLNEDGTLEVADENLNNNSFSDLTGILNEIPEGASSSSLVNYLGTPTSSKRSPLAPITLPEPNVFENPQNLKSTENQLTTSTTRITSSIVPVSPLAPLTLAEPNIFQNPGSTSNFTDLKSTENQLTTSTTPMTSPIVPVYINKTLISSNDRSPSCSPCRSRSPLALSKHLFYPHPFKKMSRTSTQPCRSPSAISSQAWRDIYERKERAKKEKIDAVEKRKDERLRKKNEKEAKKSMGQKRKGKKKVINCEKCKELLISDTEEDDLKNIGCDTCPRWYHLKCSSISFLGYNEAIQMDFICDICLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00312521;
- 90% Identity
- iTF_00312523;
- 80% Identity
- -