Basic Information

Insect: Cheilosia scutellata
Gene Symbol: -
Assembly: GCA_955612985.1
Location: OY015313.1:12512862-12514643[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.76 89 4.6 0.1 3 23 205 226 203 226 0.90

2 10 0.007 0.82 11.0 6.5 1 23 231 254 231 254 0.96

3 10 0.32 38 5.8 0.9 2 23 260 281 259 281 0.92

4 10 0.0033 0.39 12.0 0.5 2 23 287 308 286 308 0.94

5 10 0.0049 0.57 11.5 3.6 1 23 316 338 316 338 0.98

6 10 2.1e-05 0.0025 18.9 1.6 1 23 344 366 344 366 0.99

7 10 2.8e-06 0.00033 21.7 0.8 2 23 372 393 371 393 0.96

8 10 4.3e-05 0.0051 18.0 3.4 1 23 399 421 399 421 0.99

9 10 0.00066 0.078 14.2 1.4 1 23 426 448 426 448 0.93

10 10 0.00069 0.081 14.2 1.3 1 23 453 476 453 477 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.76	89	4.6	0.1	3	23	205	226	203	226	0.90
2	10	0.007	0.82	11.0	6.5	1	23	231	254	231	254	0.96
3	10	0.32	38	5.8	0.9	2	23	260	281	259	281	0.92
4	10	0.0033	0.39	12.0	0.5	2	23	287	308	286	308	0.94
5	10	0.0049	0.57	11.5	3.6	1	23	316	338	316	338	0.98
6	10	2.1e-05	0.0025	18.9	1.6	1	23	344	366	344	366	0.99
7	10	2.8e-06	0.00033	21.7	0.8	2	23	372	393	371	393	0.96
8	10	4.3e-05	0.0051	18.0	3.4	1	23	399	421	399	421	0.99
9	10	0.00066	0.078	14.2	1.4	1	23	426	448	426	448	0.93
10	10	0.00069	0.081	14.2	1.3	1	23	453	476	453	477	0.94

Sequence Information

Coding Sequence: ATGGAAGAATACGTGATAGAACTCCCGATCTGCAGAGTCTGCCTTCAGTCCGCAGTTGAATGTATAGAAATGGATACACTCATGTTGACAAATGAAATAGGCGAAGAGTCACAAACATATTTCGATTGCTTTAAGTCATGTACAAATCTGGACGTAAGTTTCGCGGATGGGCTTCCACGGCATATTTGCGCTTCATGTTCAGTAGAATTACAAACTGCTTATGATTTTATTACGAAAGCCAAAAATTCCCATGATCTGTTGTTAATGCAAGCAGAAGACATAAAACCTGAGTACCTACTGAACGAATTTGATTCACAAACCAACGAGTTCTCCGAAGAGACTGTATTTCTACCAATGGAAAATGTGGAGGAAATATTTGAAGAAGAGACTGATGGTTTTGGAGATCTGGATTTCAAGGAAGAGAGCATTGAAATAGAAAAGCATGAAGAAGAGAAAAAGCTAAAAGAAGTTGAAGATATAAGTACAGCCAATGAAAGCGACGGCGACGGAGTGAACAACATATTTGAGGAACATTTTGAAGATGAGGAGCGAATAGAAGAATTTCATATAGAGAGAAATGTAAAACCAGGCGAACCAGGAGATAGGATTATTTGCAATTTGTGTGAAGTTACGTTTCTTAATATCGATGAATTTCAGAAGCACGGTGAAAGTGTACACTCCGACTCGCCGTTCTGTTGTATGACATGCTTTCGCCGGTTTAAGAGCAAAAAGGTGCTGGTGAGGCACATGAAACGTCAGCACGATGGAAGCTTTGTAACATGCAATATATGTGGAAATTCGGTGAAAAAGACCTTCTTACGTACGCACAAAAAACAAGCACACAGTAGGGCACCGTTCCTTTGTTCAGCTTGTCCACGCACCTTTAAGTCAACAACAGGCCTGCAGATACATTCCGAAACACACAAGGAGAATCGTGAACGCAATTTCGAGTGTGAAAAGTGCCACAAGAAATTTCTTACCGAAAGAACATTCAAGGTACATGCTCGAGTTCACTGGCAACGGGAACACTTTAAATGCAGCCTCTGCGACAAGCAATTCCTGCAAAAGGTTAACCTTCGGCTGCATATGCAAATGCACCGCGGTGAGACCATGCCTTGCTTGTACTGTGACAAGAAATTTGTTCGCAAAACTGATCTAAGCGTACATATGCGTTTTCATACGGGAAATTTCCCGTACGAGTGCAAGTACTGCGACAGGCGGTTCGCGATCGTCTCTCATCTGAATTATCACCAAAAGCGTCACCAGGGCGTGATGTACAAGTGCAACATGTGCGAGAAAGAATTCATGAACATGTCGGGGTTGAGAAATCATTCTTTTCAACATACAGCTATGCCATTTAATTGTGCAGTCTGCGACAAGGGATTCCCAACTAGGTTTAAaataaaacGGCATTTGAAGGCTGTACATCATGTAGAAGATGAAGAACAGTTGGAACGGTTCATAACTACAGAAAATATtaaattggaattggaaccCAGCGTTGGAGAAGAAGTACTGTTAGAAGAGGTTGACGAAGATGATGTGTTCGACACTTAA
Protein Sequence: MEEYVIELPICRVCLQSAVECIEMDTLMLTNEIGEESQTYFDCFKSCTNLDVSFADGLPRHICASCSVELQTAYDFITKAKNSHDLLLMQAEDIKPEYLLNEFDSQTNEFSEETVFLPMENVEEIFEEETDGFGDLDFKEESIEIEKHEEEKKLKEVEDISTANESDGDGVNNIFEEHFEDEERIEEFHIERNVKPGEPGDRIICNLCEVTFLNIDEFQKHGESVHSDSPFCCMTCFRRFKSKKVLVRHMKRQHDGSFVTCNICGNSVKKTFLRTHKKQAHSRAPFLCSACPRTFKSTTGLQIHSETHKENRERNFECEKCHKKFLTERTFKVHARVHWQREHFKCSLCDKQFLQKVNLRLHMQMHRGETMPCLYCDKKFVRKTDLSVHMRFHTGNFPYECKYCDRRFAIVSHLNYHQKRHQGVMYKCNMCEKEFMNMSGLRNHSFQHTAMPFNCAVCDKGFPTRFKIKRHLKAVHHVEDEEQLERFITTENIKLELEPSVGEEVLLEEVDEDDVFDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00315468;
90% Identity: iTF_00313789;
80% Identity: -