Basic Information

Insect: Cheilosia scutellata
Gene Symbol: -
Assembly: GCA_955612985.1
Location: OY015312.1:118441572-118443597[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00012 0.015 16.5 10.0 2 23 235 256 234 257 0.95

2 11 0.0019 0.23 12.8 0.0 1 22 321 342 321 342 0.95

3 11 2.5e-08 3e-06 28.1 1.3 1 23 350 372 350 372 0.99

4 11 0.0045 0.53 11.6 2.3 2 23 378 400 377 400 0.93

5 11 1.4e-06 0.00017 22.6 0.6 2 23 405 426 404 426 0.98

6 11 3e-08 3.6e-06 27.9 0.4 1 23 432 454 432 454 0.95

7 11 1.3e-06 0.00015 22.8 0.7 1 23 460 482 460 482 0.99

8 11 6.2e-06 0.00073 20.6 1.2 1 23 488 510 488 510 0.98

9 11 0.00021 0.024 15.8 1.0 1 23 516 538 516 538 0.98

10 11 0.00026 0.031 15.5 3.3 1 23 544 566 544 566 0.99

11 11 9.2e-06 0.0011 20.1 1.4 1 23 572 594 572 594 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00012	0.015	16.5	10.0	2	23	235	256	234	257	0.95
2	11	0.0019	0.23	12.8	0.0	1	22	321	342	321	342	0.95
3	11	2.5e-08	3e-06	28.1	1.3	1	23	350	372	350	372	0.99
4	11	0.0045	0.53	11.6	2.3	2	23	378	400	377	400	0.93
5	11	1.4e-06	0.00017	22.6	0.6	2	23	405	426	404	426	0.98
6	11	3e-08	3.6e-06	27.9	0.4	1	23	432	454	432	454	0.95
7	11	1.3e-06	0.00015	22.8	0.7	1	23	460	482	460	482	0.99
8	11	6.2e-06	0.00073	20.6	1.2	1	23	488	510	488	510	0.98
9	11	0.00021	0.024	15.8	1.0	1	23	516	538	516	538	0.98
10	11	0.00026	0.031	15.5	3.3	1	23	544	566	544	566	0.99
11	11	9.2e-06	0.0011	20.1	1.4	1	23	572	594	572	594	0.99

Sequence Information

Coding Sequence: ATGGCGctagaaattataaaaatctgtcGAACGTGTCTATCGCTAGACGGTGGACTTTTGTCCATCTACGATAGTAAAGGCTCCAGTGGAAGTGGATGTGTTGCAGATATGCTTGGAGATTTAACAAGTACTGCAccCAACAGATCCGATGGGATGCCTGAGAAGGTTTGCCTCGCATGCATTAGCGAAATTAATCGATGCTACTCTTTCAAAATGAAATGTGACAACTCCGATAGAACACTCAGGCAGCTGCTTAGTATTAGCGATGAAAAGATTGAACCAATTCCCGAGCAGGAAATTATTACATCAGAAGCCGTGGAGAGTCCGCCGGATGAGAAGAGACCACAGAAACTAAAAGCTGACACCAGCATGCGAATACTTAACCAGGAGCAAGTTGAATCGGCACAATCGCAAGAAATGCACGAGATTTACTCTGTACAAAATGAGGAAGATTTGCAAGCAGCATACTTTGTCCTTGattcagatgatgatgatgatgatgaagatgatgatggtgatgatgaggCGAATGAGGGTGTCGATGTGAAACACACTGTCGAAGACATTGAAGACTCTGCAGACTTTGAAGAGATACTCGATAAATTCATCACAGAGCCACCCGAAGAAATTGAACAAGATGTTGAAGATTTCAAAGATCGTAAGCCTGATACAAAGCACTCATCTACAAAGAAAACGGAAATCAAGTGTACACATTGTCACATGTCCTTTGTTCACCGAAAAAATCTAGCCAAGCACATGCAAAAGCATCACAAGATCGTCGAGCAAGAGCCAATGATGATAGTTTCCATCAAAGGTGGTCATTTGGGGGAGGATACCATTCAGAATGTAGATGAAGTTGAAGAATTCCATGTGGAATACCACTCAAGCGAAGTCTCTGAGAACAAAGACGATGAAAAACAGCCGCTTCTGAAGGAAATGTATAACGAGCCGGTGCTCGAACATCGCTGTCCGAATTGTGGAGCCGGATTTGCTCTCGAAAAGTCTCTCAATATCCACATCAAGATGGGCAAATGTACTAAGAAACAGTACACCTGCCCAACGTGTCATAAGGTTTTCATATCCCAAGAGAATTTGCGCGCTCACGTTCGAACTCACAAGCAGGTGGACTGTGACTGTGATGTCTGTTTCGAGACATTCAGCAGCAAGCAAGAGCTCGACACGCACAAGCGAGAGCAGCACAAGATGCGGAACCAGTGCCCTACTTGCAATAAAGTCTTTACAATGGTCTCGACTCTGAAGGACCACATGCGGATTCACAGCGGCGAGAGGCCTTTCCTCTGTCCTATATGCGGAAAAAGCTTCAGCCAGAATGCTAATCTGAAGCAGCACGTAATGCGGCACAACAAAACGAAGCCGTTTAAGTGTGAGCAGTGCCCCCGGTCGTTCGTCAGTAAGGGCGAACTCTTTTCACATGTCCGCAGCCATACAGGGGACCATCCGTTCGTCTGTTTTGTGTGTAAGGCATCGTTTACCACGTCCAGTTCTCTGGTAAAGCACAAGCGAATTCATACGGGAGAGCGACCCTACGCCTGCGAATTCTGTCCCATGCGGTTTACCGCTTTGAATACGCTGAAGAACCACCGACGGACACACACTGGTGAAAAGCCGTTCAAATGCACTTACTGCCAACGGGGATTTGCGCAGAAGAGTGACTGCGGAATCCACATGCGAACCCACACGGGGGAGAGGCGGTATGTTTGTCAGGTATGTGGTTCGGCGTTCCATCAATCGGGTACCCTACGGACACATATGAAGACCCACAGGGACGTAAAGCAGGAGCAAGATATGGTCGACGACAGTGAAATACGCGATGACGAGCCGCAGGAGGAGGATGAGAACTCAGAGGAGCAAAAGAAGGAGGACATTGCGTCGGGCGAAGAAGACCACCTGCAGTTCGTCATTGAAGAGTGTTCCAGCGAGAACAACGACTACAGTGGCGAATAA
Protein Sequence: MALEIIKICRTCLSLDGGLLSIYDSKGSSGSGCVADMLGDLTSTAPNRSDGMPEKVCLACISEINRCYSFKMKCDNSDRTLRQLLSISDEKIEPIPEQEIITSEAVESPPDEKRPQKLKADTSMRILNQEQVESAQSQEMHEIYSVQNEEDLQAAYFVLDSDDDDDDEDDDGDDEANEGVDVKHTVEDIEDSADFEEILDKFITEPPEEIEQDVEDFKDRKPDTKHSSTKKTEIKCTHCHMSFVHRKNLAKHMQKHHKIVEQEPMMIVSIKGGHLGEDTIQNVDEVEEFHVEYHSSEVSENKDDEKQPLLKEMYNEPVLEHRCPNCGAGFALEKSLNIHIKMGKCTKKQYTCPTCHKVFISQENLRAHVRTHKQVDCDCDVCFETFSSKQELDTHKREQHKMRNQCPTCNKVFTMVSTLKDHMRIHSGERPFLCPICGKSFSQNANLKQHVMRHNKTKPFKCEQCPRSFVSKGELFSHVRSHTGDHPFVCFVCKASFTTSSSLVKHKRIHTGERPYACEFCPMRFTALNTLKNHRRTHTGEKPFKCTYCQRGFAQKSDCGIHMRTHTGERRYVCQVCGSAFHQSGTLRTHMKTHRDVKQEQDMVDDSEIRDDEPQEEDENSEEQKKEDIASGEEDHLQFVIEECSSENNDYSGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00315373;
90% Identity: iTF_00313682;
80% Identity: -