Basic Information

Gene Symbol
Csrnp2
Assembly
GCA_955612985.1
Location
OY015311.1:126167542-126170571[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-94 3.9e-90 302.3 7.0 2 218 263 463 262 463 0.92
2 3 0.14 4.4e+03 -1.9 0.1 21 62 485 525 483 534 0.67
3 3 0.23 7.1e+03 -2.6 1.6 75 96 756 777 725 804 0.48

Sequence Information

Coding Sequence
ATGTTCACACCTATCAAGAATCTTCTCACATACATTCATAAAAATGCAAGCGGATCGACATTTTTTGGGGGAACATCATCGAGCACAGAACTGAACGAATCTGCCACCACAATGGAAAGTGAATTACCAGAATCTAATTGCAACAGTAGCACCTCGCCGGTAATAGAGTTACCCTCCGTGGGTATTAAAAACCACGATCAGAATGAAAACGAAGTTCTAGAAGCTATCTCCTCTGTGACTTGTCACACAGATGATCCGCTACTTATTCAGGAAGACGAAGTGGAGAAGGATATATTTTTAGACTTTCCAGCCGAAACAGAAAACGAGGAAAACGATGTCGATTTTCCCACCAATGAAGTGATTGTACTGGAAGATCCCGATTTGAATGCCTCGATCAATTCTGACCCGGGTACAGATCCATTAGCAATAGATGATTGCAATGTGCCCCCGTTGAATTCCCCCAACCCATTGGACACCTCAACCGACGGTAATGTCTTATATATGGTTGATATCGATGAGATTGAGAGCAAACCTTTAGAAATAACAGACGCACAAGTGCTGGCAGCCGCAAAAGCCGCCGACGAGCATGAGATTCGTAGTGACGGCTCAGATTCTGGACTTGGGTCGGAAACGTCAGCACTGCAGTCGACAGTGACAAGTGTTGCAGATATGAGTACTTGTTCGACTGCGAGCACTTCGCCAATTGACGAGAAGGTTCCGTTGCGATCGAATTTAAAGAGACGCCTTCATGAGGATGTCAGCGATGGTGAACAGTTGGAAAAGAAGCCCAGGCGATCGATTAATTTCGACAGCGTGAAAGTGTTCTACTTTCCACGTATTCAGGGCCATGGATGTATACCTTCACAGGGTGGATGCACTCTGGGCATGGGTGCGCATCACATCAGCTTTAAGACGTTCACCTTGGCCGAGCATGCGGCAGAGCTGAGACGTGCTCACAAGTTACAGCTGCAGGAGATAAATCCCAGAGCATCCTCTAGCGATGATTCAGACAGCGATGAGGAGTTAAGCGAAGGCAGTGGATCCGATTTGGACACAGACACCAATGGTTTCCTTCAACCGGTTTCACCAAAACAGCGGAGGGCACTACTGAAGGTAGCTGGAGTGCGGAAGATAGATCCCAACGAAAAGATCGAGTGTCGAGATATTCGAAACTCGCGCGAGGTATGCGGTTGCGCGTGCAGAGACTTTTGTGACCCGGATACGTGTGCCTGCAGTCAAGCTGGAATTAAGTGTCAGGTTGACCGTTCAATGTTTCCCTGCGGTTGTTCACGTGACGCGTGTGGCAATGTCCACGGTCGCATTGAGTTCAATCCGGCACGAGTGCGAACCCACTACATTCACACGATTATGCGACTGGAAATGGAAAATCGCCAACAAAAGCGATCCCACGAAATAGGCTCCCAACTAGGTGTCGCCTCAGTATCTCATTTAGCCTACAACAGCGTCCCTGCAATAGCCAACAGCACAACAGGCATTAATAGTTACAACACAATACCAAGCTATGGTTTGGAACATAATTCTACCGCAGtctttcatcatcatcaaatgcAGCAGCACAATGCGTATATGAATCACATGCCACCAACACATCCTGCCAGTGGGGTTTATGCCAGTATAATTGAGCCACCAATAGTAGCATTACCACTGCCGCAACCGCACAGCCACTATGTTAATACCACCGCCATTGTCGAACCAGAAAGCATTGGCATTAGCAGCGGCAACTTGCTCTATCAAGACGTATCAATATATCCAGCAGTTCAGTCATCTCCACTACCGCAACCGACTGCTGCGGCATATGGCGATATATTAGCGCCTTATGCCACTTCTACACCATATCACAGCGCCCAGGTCGCGGATAGTAGCTACTCAGCGAGCGTGTACAACAGCTACCACAGTCCACATCATCTGCAGAATCATCTGTCGCATCATCAGCCGCAACAGCCGTTTTTGGGCTACACCACTGCCTGCAGTGGCGATTTGCATGGTTACACTGAATCCCAGAGCAGCTTTATTAGTTTGAATACTCCTGAGGCCAGCTCTTCGAGGTTGTCGGCTATCAATGATCTCTTGCACAATAACCGAAATACAACGGCAGCGTTGATTGCTGTTTCACCGGTTCCTTCAGACGTCATTCCAGATGAGGCATCTGTTGTAGAGGATGAAGTGCAGGAGACTCTTGTCAGCACCTCCGAGGAAGCTGATGATTGTGAAATAAATGTGAAGGTGGAGGAGGCTGGTGCTGTCGAAAAAGATCAGAAGGAGGAGGAAAACACAGAGACTACCAAGGAAACCCCCTCGGAAATAGAAGAAACCCCATCGGCACTTATTGAACAGGCTGACGACAAACTCAGTGAATTAACAGACTCAGCCCCCACACCCACAAAACCAAAGGAAGACGACTCACCACCAGTGTCATCTCCCAAAGAGGATGAAGCCGCGTGCAGTCCCGATGAGACAGTTATAAATCCAATCATCTCTAAAAATGACTCAACAACTGATGAACCACCAGCTACAGGCACGGAAACCGAAGAAGAACGCATCACTGATGTACTAACCCCCATCGTGGAAACCGTATCCGCTTAG
Protein Sequence
MFTPIKNLLTYIHKNASGSTFFGGTSSSTELNESATTMESELPESNCNSSTSPVIELPSVGIKNHDQNENEVLEAISSVTCHTDDPLLIQEDEVEKDIFLDFPAETENEENDVDFPTNEVIVLEDPDLNASINSDPGTDPLAIDDCNVPPLNSPNPLDTSTDGNVLYMVDIDEIESKPLEITDAQVLAAAKAADEHEIRSDGSDSGLGSETSALQSTVTSVADMSTCSTASTSPIDEKVPLRSNLKRRLHEDVSDGEQLEKKPRRSINFDSVKVFYFPRIQGHGCIPSQGGCTLGMGAHHISFKTFTLAEHAAELRRAHKLQLQEINPRASSSDDSDSDEELSEGSGSDLDTDTNGFLQPVSPKQRRALLKVAGVRKIDPNEKIECRDIRNSREVCGCACRDFCDPDTCACSQAGIKCQVDRSMFPCGCSRDACGNVHGRIEFNPARVRTHYIHTIMRLEMENRQQKRSHEIGSQLGVASVSHLAYNSVPAIANSTTGINSYNTIPSYGLEHNSTAVFHHHQMQQHNAYMNHMPPTHPASGVYASIIEPPIVALPLPQPHSHYVNTTAIVEPESIGISSGNLLYQDVSIYPAVQSSPLPQPTAAAYGDILAPYATSTPYHSAQVADSSYSASVYNSYHSPHHLQNHLSHHQPQQPFLGYTTACSGDLHGYTESQSSFISLNTPEASSSRLSAINDLLHNNRNTTAALIAVSPVPSDVIPDEASVVEDEVQETLVSTSEEADDCEINVKVEEAGAVEKDQKEEENTETTKETPSEIEETPSALIEQADDKLSELTDSAPTPTKPKEDDSPPVSSPKEDEAACSPDETVINPIISKNDSTTDEPPATGTETEEERITDVLTPIVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00314301;
90% Identity
iTF_00313470;
80% Identity
-