Basic Information

Gene Symbol
ct
Assembly
GCA_955612985.1
Location
OY015311.1:74055825-74128625[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3e-26 2e-22 79.7 0.0 3 71 794 863 792 869 0.94
2 3 5.4e-32 8.3e-28 97.0 0.0 3 77 1229 1304 1227 1306 0.96
3 3 7e-31 1.1e-26 93.4 0.0 3 77 1442 1517 1440 1519 0.96

Sequence Information

Coding Sequence
ATGCAGCCAACACTGCCACAAACAGCCGGGACAGCCGATATGGATTTGACGGCTGTTCAATCAATGGATTGGTTATTTAAAAAGGAGCGAATCTATCTATTGGCACAATTCTGGCAACAGAGGGCTACTTTGGCTGAAAAGGAAGTTAATACTTTGAAGGAGCAATTGTCAACAGTTTCgactgcaacaacaacaacatcaacgtcttcgacaacaacaacaacagcgtcTTCGATACATTCGTCGCCACCGTCTCCGTCGTCGGCGAGCACAACACCCATACCAAATATCAAACTATCACCAACGataaacaacaacagcagtttcaataataacaacaataataataataataacaacaaattaaacagtGTTGCCATATCACAACATTTGCATCAGAACGGAAATCTGTTGGCGGCAACACCGTCGCCGTCCCCACCATTGTCCGAGAACGGTAGCACACTAAACGGTTGCCTCAACTCGGTGGCGGCTAAATTGCTCTTCAATCATAATCAAATAATGGACACAACCGGATCGGGCACACCGACCGACAACGTGGTAACGACGACGACAACCACTGCACAGCACAGCGGTCCCGCAACAGACGCTAGCAAGCTAATAACAGCGATGACCGCCGAAATGAATCTCCACCAGGACTCCAGCGAATCGGCAACGCTGGCGAGCAATCAAATATCAAATCGGTCGCACAGCCCCCTCCTCTCAATGGAAGGCAGTGGCAATGAGGCAACGCGaaacaataataacaataatagtaCTAGTAACAATAATAACAATACAAATAGTAATAGCAGTAGTAGTTGTAATAATAATTTAGCTGATGAATTGGCTGCCAAAGAGAAAGAGATTAAAGCACTTATCGACGAGGTTAACCGACTGCAAGCCCTCCAAGAAACCCACATTGTACAAATACAAAGACTTGAAGATAATCTGGAAGCGAAGCGTCAACACATTCTGAGACTAGAGGATCGCCTGGAGAAGCAGCAGCAGTTCCCTGCAGTGCCGAAACCAAGTGCGGATCTGTATCGCGATGATGGCGAGCAACAGACGGCAGTTGGAGCGGCTGAGCCGCCGCCACcgcctccaccaccaccaccaccatcatcatctgCGCTGCCCGAGGAGGTGGTTCACATCAAAAAGGAAACTCAACCGCCAACAACACTCGACATCACGGCTGCTGCGAGTGACCCCAAACAGTTCCAGGAACTATTGCTCGAGAGAACAAAGGCTCTGGCGGCGGTCGCTGCCCAGACCTCGAGCGAGGCCGCACTGAAAGCTGAAGGAACTTGCAGTGATTCGATTGCAGCAGAGACCTCCAATGAGCAGCCTGCAGCATGTGTGGTCCTTGATAGTGACCCGAACGAGTCGAATCAGCAGCAGGAGGTGAGACCGCCATCGGAATCGGGGGCGTCTTCGACGTCGGTAGAGCAACTTCCGTCGTCGAATTTCGCAAGTGTCGATCAGTTTGGTTCACTGCTGGGCGGTGAGCTGGTGAATTCGTATTGGCGTCGTGGCTTTGATTTGTCAGCGGAACTTAAGTTGCCGCCGCCACCGCATCACCTGCCGTTAGCGCCACCACTTGCGATGCCAACGCAACAGCCATCGCCAGCAATAGCCGCCGTTTCGATAGCACACCCACCACCGCCGCTACCATCAATAGCTACGACAAATCCAAGCTCTAAAACGCCAACAtcgatttttcaaaatttctcatcAATCCTTTCGTGCCGATCGCCACCACCACTCTCAATGGCGGCAACGGGACCATCAACCACCACTCTCTTGAGTCAGCTAGTCAATTCAACCTTCTCATCCAATTCAACTCCTTCTCTTCGAACAGATAACCATCCTtcgttgttgtcgtcgtcgtcgtcatcgtcgacCACAACCACGGGCGCCCACCTGCAGCAGTCTTCACAACAGCACCAGCATCATCACCACCAGCTCCATCATCAGCATCCActtcagcatcagcatcatccTGCCCTACAGCATCAACAGCACCAGGACTATGAGAAGGCAAACAGCCATCACGATTCGTCGTCAACGGCGAGTACGCCCAATCTGCAGGACCAGCGTTCCAACGACGGTCACATAAACGGCGCCAAATCGGCCAAGGCAGCCCTAGAGGACAACAACAACTCGTTGGGCTCGTTGGCACATCTGCCACCAGCATTCCTGCCAGGCCTGccattccaattccaagaccgTGGTCATTTCCGTTTCGCCGAGGACATCCAGCTACCGCCCGGCGCCTCCATGGCTGGCCGCCTCGGAGAGTCGCTCATTCCCAAGGGCGATCCAATGGAGGCCAAGCTCCAGGAGATGCTACGCTACAACATGGACAAGTACGCCAATCAAAGTCTCGACACACTTCACATATCACGCCGAGTGCGCGAACTTCTATCCGTGCACAACATCGGACAGAGGCTCTTTGCCAAGTACATCCTCGGACTGTCGCAGGGCACCGTCTCCGAGTTGCTGTCCAAGCCAAAGCCCTGGGATAAATTGACTGAGAAAGGCCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGCTGCTAAAGTCGCTGATACCCAAAAAAGACTCGGGCATGCCGCAGTACGGCCGCAATGAGGACTCGATGTCGGACGATCGCATTGCGCACATTTTGAATGAAGCTTCCAGCCTTATGAAGACCCCTCAGGGACCAGGTGCACAGTTGCAGCAACAACTGCAGCACGAAGCCCAGCGTCAGCACCAGCAACAGCACTCGTCGTCGCTTGAGGACTCGCAGCACAGCAACGAGGACTCCAAGTCACCGCATGCGTCATGCACTTCACCCTTCTACAAGGAATCACCAgtacagcagcagcagcaacagcaacagcagcaacaacaacagcagcaacagcagcagttgCTGCGACGAGACGAGGCACAGCGTCGGAGCGTAAAGCCCGACGAGATGTCCCAGGACAAGATGGCGCGGATATATCAAGAAGAGCTGGCAAAACTGATGACGCGCACACCACGCGACACATTTCCAAGTTTTCTGTTTCCACACTTTTTCAGTGCGGCTGGTGGCCTTCCGCCCGCCAACAGTGCGATGCCACCCGACGACAACATTCGCATGGCCTTTGAGGCCTACCACCGTGAGATGGCCAAGTTGCAGCAGAACAGCAGCGGCAACATCCCCAACTTTCCGAACTTCTCGAGCCTGATGGCGCTGCAGCAGCAGGTGCTGAACGGCGCTCAGGATCTGTCCGTGCCGAAGGAAAACGAAATGAAGGTGAACGGCCAACGAAATTCCATGGAGAGCTGCGATCTGAATCAAACCAAAGAAGCCAACGATGAGGCCGTTCTGCGTCACTCAAGTGCATTTAGCTTAGTTCGAAACAAACCGGAATCCACGCCAGCACCGAGCTCCAACTCGAACCCCAACACAAACTCAGCCGCTCCCAGTCCTCTCAGCAATTCGATTCTACAGCCGGCTATGACGCCCACTGAAGACTTCTCAACAGCGGCCAGCCCACTGCAGCGAATGGCATCGATCACCAACTCGCTGATCACTCAGCCCCCAGTGACGCCTCACCATACACAGCCGCAGAGGCCCACGAAGGCCGTGCTGCCGCCCATCACCCAGCAGCAGTTCGACATGTTCAACAACTTGAACACCGAAGACATTGTGCGGCGAGTGAAAGAAGCCCTGTCGCAGTACTCTATCAGCCAGAGGCTGTTCGGAGAGTCAGTTTTGGGGCTGTCGCAGGGATCCGTGTCGGATCTGCTCGCGAGGCCCAAACCCTGGCACATGTTGACCCAGAAAGGCCGTGAACCGTTCATTCGCATGAAGATGTTTCTCGAGGACGACAACGCCGTGCACAAACTCGTGGCCAGCCAGTACAAGATAGCCCCTGAAAAACTGATGCGCACCGGCAGTTACAGCGGCAGTCCGCAAATACCCCAGGGCCTTGCCAATAAAATGAACAGCATTCCAATGCAGAAGATGATGAACGAGCTGAAAATGCAGGAGCCACAGGCGCAGCATATCATGCAGCAAATGCAGGCTGCGTCCGCGATGGCAGCCGCCGCCGCTGCCGGCCACATGCAAAACGCCCAGCACCAGGGTATGTTGCTAACCACTCCCGGACTACCGCCACAGCACGCCATAAGCCTGCAGCAAGCCGCCAACGAGAAGAAGCCAATGATGATGCCAATACACTCGCCGCATCAAGCCAATGTCATGCGAAGCAGCATGCACCAGCACATGTCACCGACGGTCTACGAGATGGCCGCTCTCACACAAGACCTTGACACACAGGTAATCACAACCAAGATAAAGGAGGCCCTGCTGGCCAACAACATTGGCCAAAAGATCTTCGGCGAGGCGGTATTGGGCTTGTCACAAGGCTCCGTCTCGGAGCTGCTCTCGAAGCCGAAACCTTGGCACATGCTCAGCATAAAGGGCCGCGAACCCTTCATCCGCATGCAGTTGTGGCTTTCCGATGCCAACAACGTCGAGCGGTTGCAGGTACTTAAGAACGAACGTCGCGAGGCCAGCAAACGCCGTCGGTCCACGGGCCCCAACCAACAGGACAACAGCTCCGACACCAGCAGCAACGACACCGCCGACTTTTACACCAGCAGCCCCGGGCCGGGTTCGGTCGGTTCCGTAGGCGCACCGCCCAACAAAAAGCAACGCGTACTCTTCTCCGAGGAGCAAAAGGAAGCTCTGCGCCTGGCCTTTGCCCTCGATCCGTATCCCAATGTAGGAACGATTGAATTTCTCGCCAACGAACTGGGTCTGGTAACGCGCACCATCACCAACTGGTTCCACAACCACCGAATGCGCCTCAAGCAACAGGTGCCGCATGGCCAACCCACGGAGCCGGTGCCCAGTCGAGAGAACACCAACGGAACTCCCTTCGATCCCGTCCAATTCCGTATACTCCTCAATCAAAGACTGATGGAATTGCAGAAAGAACGCATGGGACTTAGCGGCGCACCGATTCCCTACCCACCGTACTTCGCCGCAAACCCCAACCTCGCCGCGCTCATTGGTCGCGGTCTCCTCCCCGGCGGAGGTGAGCCTGATCTGCAGGCCCTTAACAACGCCTTCAAGGAACAAATGAGTGGCCTAGATCTGTCCCTCAAGCGGGAACGTGACGACGACTTCGAGGATGACGGCGAGGGTGACAGCCACCTATCCGACAACGAGTCCATCAACGGAAGCGACGAAAAGTCCGAGATGAGCGAAACACCTCGCTCCTCCCTATCCGGAACCGGCATGCAATCGCGAACATCCAGGCGCAAGCCGGCTGCCCCGCAATGGGTCAACCCCGACTGGCAGGGTGACGGCAAATCCGGCGGACTTATGCCGCCAATGCCCATCGGTGCCACCGACAAAGAGGTCATCATCAACGGCGTCTGCGTCATGCAGCAACAAGCTGCCGACTACAGTCGAAAGTCGGCCAATCCAgacgacgaagacgacgacgacgatgacgccTCCGACGCCAACGACGACGAACCATCTGCCCATCATCGCACTCAGTCTTCGGACTGCGACGACCCACCCGCCGACATCGATCAGCGCTTCATGGAACCCGAGGTCCGAATCAAGCAAGAAGAAGACTGCGACAGCAATGACAGCCATCAAGACGATCACGATTCCGACCCAAGGAAGCCTCCACACCACCGGGACGACGAGGACGACACCCCCGGCGCATGGAATTACTAA
Protein Sequence
MQPTLPQTAGTADMDLTAVQSMDWLFKKERIYLLAQFWQQRATLAEKEVNTLKEQLSTVSTATTTTSTSSTTTTTASSIHSSPPSPSSASTTPIPNIKLSPTINNNSSFNNNNNNNNNNNKLNSVAISQHLHQNGNLLAATPSPSPPLSENGSTLNGCLNSVAAKLLFNHNQIMDTTGSGTPTDNVVTTTTTTAQHSGPATDASKLITAMTAEMNLHQDSSESATLASNQISNRSHSPLLSMEGSGNEATRNNNNNNSTSNNNNNTNSNSSSSCNNNLADELAAKEKEIKALIDEVNRLQALQETHIVQIQRLEDNLEAKRQHILRLEDRLEKQQQFPAVPKPSADLYRDDGEQQTAVGAAEPPPPPPPPPPPSSSALPEEVVHIKKETQPPTTLDITAAASDPKQFQELLLERTKALAAVAAQTSSEAALKAEGTCSDSIAAETSNEQPAACVVLDSDPNESNQQQEVRPPSESGASSTSVEQLPSSNFASVDQFGSLLGGELVNSYWRRGFDLSAELKLPPPPHHLPLAPPLAMPTQQPSPAIAAVSIAHPPPPLPSIATTNPSSKTPTSIFQNFSSILSCRSPPPLSMAATGPSTTTLLSQLVNSTFSSNSTPSLRTDNHPSLLSSSSSSSTTTTGAHLQQSSQQHQHHHHQLHHQHPLQHQHHPALQHQQHQDYEKANSHHDSSSTASTPNLQDQRSNDGHINGAKSAKAALEDNNNSLGSLAHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGMPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPGAQLQQQLQHEAQRQHQQQHSSSLEDSQHSNEDSKSPHASCTSPFYKESPVQQQQQQQQQQQQQQQQQQLLRRDEAQRRSVKPDEMSQDKMARIYQEELAKLMTRTPRDTFPSFLFPHFFSAAGGLPPANSAMPPDDNIRMAFEAYHREMAKLQQNSSGNIPNFPNFSSLMALQQQVLNGAQDLSVPKENEMKVNGQRNSMESCDLNQTKEANDEAVLRHSSAFSLVRNKPESTPAPSSNSNPNTNSAAPSPLSNSILQPAMTPTEDFSTAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNELKMQEPQAQHIMQQMQAASAMAAAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAANEKKPMMMPIHSPHQANVMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLVTRTITNWFHNHRMRLKQQVPHGQPTEPVPSRENTNGTPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALIGRGLLPGGGEPDLQALNNAFKEQMSGLDLSLKRERDDDFEDDGEGDSHLSDNESINGSDEKSEMSETPRSSLSGTGMQSRTSRRKPAAPQWVNPDWQGDGKSGGLMPPMPIGATDKEVIINGVCVMQQQAADYSRKSANPDDEDDDDDDASDANDDEPSAHHRTQSSDCDDPPADIDQRFMEPEVRIKQEEDCDSNDSHQDDHDSDPRKPPHHRDDEDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01395716;
90% Identity
iTF_00314056;
80% Identity
iTF_00312485;