Cpag016411.1
Basic Information
- Insect
- Cheilosia pagana
- Gene Symbol
- pnr
- Assembly
- GCA_936435595.1
- Location
- CAKZFE010000064.1:4071265-4079789[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.047 1.1e+02 2.7 0.6 11 26 414 428 401 437 0.82 2 2 4.3e-17 1e-13 50.8 5.9 1 34 461 493 461 495 0.97
Sequence Information
- Coding Sequence
- ATGGAAGGTCAGCAACaacaccagcaacagcagcagcagcaacaacccaTCGATCTAATAACTGAAATCAAAACAGAGCCCATCAGTGAGCAAGTACCGTCGCGGACACCAACGATTGAAgagcagcatcagcagcaacaggagcagcaacagcaacaacaacagcagcaacaacaacaacagcaacaacagcagcaacagcaacacttgcagcagcagcagcatcagcaacaaCTCCAACAGGAACAGCAACGCAAGGATACCGCCCTGAATGTGTCTAGGCTCTTGCGTGGCGAGCTAATCGATCAATCGTCAGGACCAATTGTGCGGACCCAACAGAGACGCATTCTGACAACATCTGGGACTCTGAGAGAAGTCAGCGATCCGGTGCGAGACGCCGACGCCGACTCAGACTACAACAGCCATCAACACTCGCCGTCGGACTTTGTTCAAATGACGCCGCGCACAGAGGAGTCCACCACTGTCTACACCTACGAGACAACCCCCACGGGTACCGCTCTAATCGCATGCGAAAATCCAGCAATCAAAATCGAATCCCTGGAGAaggagcagcaacaacaacaacaacagcagctgcAACAGCAAACCGAACAACCCGCAACTGGTGCGACAGCAGTTTTCGCCGAAGCCACAGTAGTCTCGGCTGCGGCGCTGCAAAACCACCACAGCCAGCACACGCAACATCACACCACGCTACGTGCCTACGAAGATGAACGCTTCCCAACGGCCATCGAAAACGGTGACCAAACTCAAATCATCTACTACGATGGCGGCCTGAACGGCGCCACTGTCGTCGATGCCCACAACGAGGGCAAAACCTTCACCAATCTAGGTCCCGCTGCAGGCAGCCTGCCACCGCCCGGCACCGAATACTCAGTCGCGAGCAACTACAGCACCAACGGCTCGTATGGCTTGGCACAAACCTACAACATGACCAATGCCAATCCGCTCCTGTACAAATCTGATCCGACTTTGAGCTCGATTCGGCCCAACAGTCAGTTCCCGCTAACAGTGTACGAGAATCCCAGTGTGTCCGAGTCCTACTGGACCAACACGCCCTCCATTGAGTTCTCCAATATTAATCCTTACAATCCGGTGATCACCGATGAATACGGCTCGCCGAATGGCGGCTCTTGGGTGCAATCGGCAGGCGGCTCCAGTGTCACATCCGCCTTCGATCCGAATGGTGCCGATTTAAAGTGTCAATACTGTGGCAGCCAACTGATTCGAAAGGACAATAACGAGTACATCTGCACAGCGTGCTCGGCATCGCGTATGACGTATGGGACGCGGTTGCCACCGCGTCAAACCAAACCGAAGGCGTCAACTGCGAACAACAATCGACGGAATGGGGTTCAGTGTGCGAATTGCTTCACCACATCGACCACGTTGTGGCGACGCAACAACGAGAGTCAACCGGTTTGCAATGCGTGCGGATTGTACTACAAGCTGCACAACATGAATCGGCCGCTTACCATGAAGAAGGAGGGCATCCAGAAGAGGAAACGCAAACCGAAGCTGACGAATGGAGCACCAATGAGGAGTCCCCTAccaaGTATTCTTGTACCCCAACATACGATGTATCCGTCACAAGTCCAAAATATCGGCCTATCAATGGTCTCTACGCACGAGCTGCATGACATAGCAAATCCGGGCAGTAACGGCACCAATCGCATCGGCATCGGTCACAATGATGTCAATTCAATAAACGTCAGCCGTCATCATCTGACATCGGAGGTGCCAACCTCAGCTGGAGAAAATCTTTCCGCCCAATACAGCTGTCAGTCGCCGTGCCAGTCACCACATTTACCAAACTCCAGCACTCTCAATCGACAGATCACACAGACAGTTCCACCAATAGATGGCGGCCGATCAGTCAATGGTGAGATCACAACCAGTGTCATAACTAGTACTGGCATTCCAGAAAGGTCCTCGAATAATTGA
- Protein Sequence
- MEGQQQHQQQQQQQQPIDLITEIKTEPISEQVPSRTPTIEEQHQQQQEQQQQQQQQQQQQQQQQQQQQHLQQQQHQQQLQQEQQRKDTALNVSRLLRGELIDQSSGPIVRTQQRRILTTSGTLREVSDPVRDADADSDYNSHQHSPSDFVQMTPRTEESTTVYTYETTPTGTALIACENPAIKIESLEKEQQQQQQQQLQQQTEQPATGATAVFAEATVVSAAALQNHHSQHTQHHTTLRAYEDERFPTAIENGDQTQIIYYDGGLNGATVVDAHNEGKTFTNLGPAAGSLPPPGTEYSVASNYSTNGSYGLAQTYNMTNANPLLYKSDPTLSSIRPNSQFPLTVYENPSVSESYWTNTPSIEFSNINPYNPVITDEYGSPNGGSWVQSAGGSSVTSAFDPNGADLKCQYCGSQLIRKDNNEYICTACSASRMTYGTRLPPRQTKPKASTANNNRRNGVQCANCFTTSTTLWRRNNESQPVCNACGLYYKLHNMNRPLTMKKEGIQKRKRKPKLTNGAPMRSPLPSILVPQHTMYPSQVQNIGLSMVSTHELHDIANPGSNGTNRIGIGHNDVNSINVSRHHLTSEVPTSAGENLSAQYSCQSPCQSPHLPNSSTLNRQITQTVPPIDGGRSVNGEITTSVITSTGIPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314811;
- 90% Identity
- iTF_00313928; iTF_00313110;
- 80% Identity
- -