Basic Information

Insect: Cheilosia pagana
Gene Symbol: -
Assembly: GCA_936435595.1
Location: CAKZFE010000027.1:8701009-8710342[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.5e-06 0.00032 21.2 1.4 3 23 323 343 322 343 0.98

2 8 2.4e-07 2.2e-05 24.9 2.5 1 23 349 371 349 371 0.98

3 8 8.1e-05 0.0073 16.9 1.7 1 23 377 399 377 399 0.96

4 8 5.8e-06 0.00052 20.6 1.5 1 23 405 427 405 427 0.99

5 8 0.0011 0.098 13.4 8.0 1 23 433 455 433 455 0.99

6 8 0.00025 0.023 15.4 5.5 1 20 461 480 461 483 0.95

7 8 0.00024 0.022 15.5 0.2 1 23 489 511 489 511 0.97

8 8 7.5e-05 0.0067 17.1 0.7 1 23 517 539 517 539 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.5e-06	0.00032	21.2	1.4	3	23	323	343	322	343	0.98
2	8	2.4e-07	2.2e-05	24.9	2.5	1	23	349	371	349	371	0.98
3	8	8.1e-05	0.0073	16.9	1.7	1	23	377	399	377	399	0.96
4	8	5.8e-06	0.00052	20.6	1.5	1	23	405	427	405	427	0.99
5	8	0.0011	0.098	13.4	8.0	1	23	433	455	433	455	0.99
6	8	0.00025	0.023	15.4	5.5	1	20	461	480	461	483	0.95
7	8	0.00024	0.022	15.5	0.2	1	23	489	511	489	511	0.97
8	8	7.5e-05	0.0067	17.1	0.7	1	23	517	539	517	539	0.98

Sequence Information

Coding Sequence: ATGGAAACTTTGTTCACTCCAAAAGAATATCACACCTCCAACGGAGCCGGGTTGACCACAACTCATATTTTCGTCCCTAAAGTGCCACTTCGACCATCTCTTTACCAATCACCTCCTTACAAAATTCCTCTTACTTTTTATTACCAGAATGTAAGAGGCCTTCGCTCCAAAACCAGTACTGTTCTGCGCCAGTCTCATGCTCTTCCATTCGATATATATGCCCTAACCGAAACCAACCTAACCCCCGACATAAAGAGTCAAGAGTTATTTCCCCCTTCATTCAATGTCTTTCGAGACGATGAAATTCCTCGCCCCTCAAACAATTCTCCTTGTCGAGGAGTTCTTCTGGCCGTCAACAATAGCCTTGACTCATCCCCTGTTGCTACTTCCTTATCTTCGAAACTTGACTTTgtgtcaataaaaataacactcCCCCAGAGATCCCTCTACGTTATATGCTTCTATATTCTACCAGCCCAACCTATTGAATCGTACCAACTTGCCATCGACGCGATTGACAAATTAATCGACACATCTGACTCCCTCGACAATATCCTCATTTTCGGCGATTTTAATCTGCCTCAGCTGCACTGGTCTCCATCAGATGATGAATCTTTCCTCATAGCTTCAAATGCCAAATCAACTAAGGAATGCCTCTTCTTAGATAGCCTGACAGACTCTAGTCTATTTCAAGTTAGCGGGGTCTCAAACTTCATGGGCGTACACATTCCAGACCCTGATGTCGCATCAACACTCAATGATCCACTATACCCTGACGAACATCAAAATCAACTCCAAACTGACACTCCGAATTCGGAAGAAGAAAACCACGAATTCAATCAAACTGAGCCTGACGAAGAAAATGAACCTCCAAATTCATCAAACTGTAAGGACATTGAGGACTTGCTTTCTCCGTCAAATAAACTCCAAAAAAAGAGACGAAACCGTAAGAAAACTATGCCAGCATGTTCGGATTGCGAGAAAACATTCAGTGATCGCAAATCGCTTAACATTCATAAACGTTCGCACACAGGCGAAGCGCCATACCAATGTGAAGAATGTGGCAAATGTTATAAGAATTCATTCAACTTGAGATCACATCTGATTATCCATTCCGGAACTAGACCGTTCAAATGTGAGATGTGTGATGCTGGCTTTTCCCATCCCAACTCTCTGAAAACACATCGATATCTGCATACGGGTGAGCGTCCCTACAAGTGTGAACGCTGTGAGAAAGCGTTCGTCACAAGTAGTAGCCGCAAAGTACATATGCGACAGCACACCGGAGAAAAGCCTTACGTTTGCCACGTTTGCGAAAAAAGTTATACTGCCAAGTGCCACTATAACAACCACTTACGGAGACACCGAGGCCAAAGGGACTTTTGCTGTAAGGAATGCGATAAGGAATTTTTCGATAAATCTACTCTTGTGCGACACATGGCGTGTCATTCGAACGAGAAAAGTTACGTTTGTGATGTTTGCCCGGTTAGATTCGCTCGCCGACGGACCCTAGTGGAACATAAAAAACTGCATTCCACTGTCAAGCAATATGTCTGTAAGCTATGCAGTAAAGATTTTGCACAATACGCCGGACTGTATTCGCACATGAAATACCACAAGAATAAGGATTAG
Protein Sequence: METLFTPKEYHTSNGAGLTTTHIFVPKVPLRPSLYQSPPYKIPLTFYYQNVRGLRSKTSTVLRQSHALPFDIYALTETNLTPDIKSQELFPPSFNVFRDDEIPRPSNNSPCRGVLLAVNNSLDSSPVATSLSSKLDFVSIKITLPQRSLYVICFYILPAQPIESYQLAIDAIDKLIDTSDSLDNILIFGDFNLPQLHWSPSDDESFLIASNAKSTKECLFLDSLTDSSLFQVSGVSNFMGVHIPDPDVASTLNDPLYPDEHQNQLQTDTPNSEEENHEFNQTEPDEENEPPNSSNCKDIEDLLSPSNKLQKKRRNRKKTMPACSDCEKTFSDRKSLNIHKRSHTGEAPYQCEECGKCYKNSFNLRSHLIIHSGTRPFKCEMCDAGFSHPNSLKTHRYLHTGERPYKCERCEKAFVTSSSRKVHMRQHTGEKPYVCHVCEKSYTAKCHYNNHLRRHRGQRDFCCKECDKEFFDKSTLVRHMACHSNEKSYVCDVCPVRFARRRTLVEHKKLHSTVKQYVCKLCSKDFAQYAGLYSHMKYHKNKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -