Cpag001279.1
Basic Information
- Insect
- Cheilosia pagana
- Gene Symbol
- Csrnp2
- Assembly
- GCA_936435595.1
- Location
- CAKZFE010000004.1:3810374-3813178[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-94 2.7e-90 302.3 7.2 2 218 261 461 260 461 0.92 2 2 1 2.1e+04 -8.4 12.7 62 91 760 789 700 823 0.51
Sequence Information
- Coding Sequence
- ATGTTTACACCTATTAAAAATCTTCTCACGTACATTCACAAGAATGCAAGCGGATCGACATTTTTCGGAGGAACATCATCGAACACAGAATTGAACgacgccaccgccaccgccacaaTGGAAAGTGAATTGGCCGAAGCAAACTGCAGTAGTAGCGGCGTACCGCTAATAGAATTGCCCTCCGTGAGTGGTAAAAATCACGATCAGAATGAGAACGAAGTTCTAGAAGCAGTCTCCTATGAGACTTGTCACGCCGATGATCCGCTACTCATCCCGGAAGACGAAGTGGagaaggatatatttttggacTTTCAAACGGAAACAGAGGCGGAGGAAAACGAAGCCGATTTTCCCACCAGTGAAGTGATTGTAATGGAAGACCCCGACTTGAATGTCTCAGTCAATTCTGATCCGAGCACAGATCCATTGGCAATAGATGATTGCAATGTGCTCCCGTTGAACTCGCCCAACCCACTGGACACCTCAACCGATGGCGATGTCCTGTATATGGTTGATATCGATGAGATGGAGGGCAAACCTTCAGAACTAACAGACGCACAAGTTGCCGCTGCGGACGAACAAGAGATTCGCAGTGATGGCTCAGATTCTGGCCTTGGCTCGGAAACATCAGCTCTGCAGTCGACTGTTACAAGTGTCGCAGACATGAGTACTTGTTCGACTGCGAGCTCTTCGCCAATTGTAGAGAAGGTGCCGCTGCGATCGAATTTGAAGAGACGTCTGCACGAGGATGTCAGCGAGGGTGAACAGTTGCAAAAGAAGCCCAGGCGATCGATTAACTTTGACAGCGTGAAAGTGTTTTACTTTCCACGTATTCAGGGCCATGGATGTATACCTTCGCAGGGTGGCTGCACTTTGGGCATGGGTGCGCATCACATCAGCTTTAAGACATTCACCTTGGCGGAGCATGCGGCCGAGCTGAGACGTGCTCACAAGTTGCAGCTGCAGGAGATAAATCCGCGAGCGTCCTCTAGCGATGATTCAGACAGTGATGAGGAGTTGAGCGAGGGCAGTGGCTCCGATTTGGACACGGATACAAATGGTTTTCTGCAGCCGGTTTCACCGAAGCAACGGCGGGCGTTACTGAAGGTGGCCGGAGTGCGGAAGATAGATCCCAACGAAAAGATCGAGTGTCGGGATATTCGAAACTCGCGTGAGGTATGTGGCTGTTCGTGCAGAGACTTTTGTGACCCCGATACGTGTGCCTGCAGTCAAGCTGGAATTAAATGTCAGGTTGACCGTACAATGTTTCCCTGCGGTTGTTCTCGGGACGCCTGCGGCAACGCACACGGACGCATTGAGTTCAATCCGGCACGAGTGCGAACGCACTACATTCACACGATTATGCGGCTGGAAATGGAAAACCGACAACAGAAGCGATCCCACGAAATAGGCTCCCAACTAGGCGTGGCCTCAGTATCTCATTTAGCATACAACAGCGTCCCGCCAATGGCCAACAGCACAACGGCTATCAATAGTTACAACACAATACCAAGCTATGGTCTGGAGCATAATTCCACCGCAGTctaccatcatcatcacatGCAGCAGCACAATGCGTATATAAATCATATGCCACCAACTCATCCTGCCACTGGGGTCTACGCCAATCTCATTGAGCCACCAATAGTAGCATTGCCACTGCCGCAACCGCACAGCCATTATGTCAACACCACAGCCATTGGCGAACCAGAAAGCATTGGCATAAGCAGCGGCAACCTGCTCTATCAAGACGTATCAATATATCCAGCAGTGCAACCATCGCCACTAGCGCAGCCGGCTGCTGCGGCATATGGTGACATACTAGCGCCATATGCCTCGTCTATACCATATCACAGTGCCCAGGTCGTGGATGGCAGCTACTCAGCGATCGTCTACAACAGCTACCACAATCCGCATCATTTGGAGAATCATCTGCCGCAACAGCCGTTTTTGGGCTACACAACTGCCTGCAGTGGCGATTTGCACGAGTACACTGAATCACAGAGCAGCTTCATCAGCTTGAATACTCCTGAGGCCAGCTCTTCAAGGCTGTCGGCTATCAATGATCTCTTGCACAATAACCGAAATACAACGGCAGCGTTGATTGCCGTCTCAACGGCTACTTCAGACGTCATTCCAGATGAGGCATCTGTTGAAGAGGAGGAGGAAGtgcaggaggaggaggaggaggtcGAAGTGCAGGAAACTGTTGTAGAGGATAAAGTGCAGGAGGATGTTGTCCATCCCTCCGAGGAAGGTGACAACTGTGAAGAACAGGCGGCGGATGTTGCTGTCGAAAACGATCAGAAGGAGAAGGAAAACACAGACACTACGAGTGACACCCGCTCGGAAATTGAAGAAACTCCATCGGAACAGGCTGACGAAAACAGCAGTGAATCGACAGGCGCAAAATCAAAGGAAGAAGACCCACAACCAGTGTCATCTTCCAACAATGATGAAGCCACTTGCAGTACCGGTGAGACCGATATAAGCCCAACCACCACTGAAAATGACTCAACAACTGATGAACCACCAGCTACTGGCACGGAAACCGAAGAAAAACCCATCACCGATGTGGTGACACCCATCGTGGACACCGTATCCGCTTAG
- Protein Sequence
- MFTPIKNLLTYIHKNASGSTFFGGTSSNTELNDATATATMESELAEANCSSSGVPLIELPSVSGKNHDQNENEVLEAVSYETCHADDPLLIPEDEVEKDIFLDFQTETEAEENEADFPTSEVIVMEDPDLNVSVNSDPSTDPLAIDDCNVLPLNSPNPLDTSTDGDVLYMVDIDEMEGKPSELTDAQVAAADEQEIRSDGSDSGLGSETSALQSTVTSVADMSTCSTASSSPIVEKVPLRSNLKRRLHEDVSEGEQLQKKPRRSINFDSVKVFYFPRIQGHGCIPSQGGCTLGMGAHHISFKTFTLAEHAAELRRAHKLQLQEINPRASSSDDSDSDEELSEGSGSDLDTDTNGFLQPVSPKQRRALLKVAGVRKIDPNEKIECRDIRNSREVCGCSCRDFCDPDTCACSQAGIKCQVDRTMFPCGCSRDACGNAHGRIEFNPARVRTHYIHTIMRLEMENRQQKRSHEIGSQLGVASVSHLAYNSVPPMANSTTAINSYNTIPSYGLEHNSTAVYHHHHMQQHNAYINHMPPTHPATGVYANLIEPPIVALPLPQPHSHYVNTTAIGEPESIGISSGNLLYQDVSIYPAVQPSPLAQPAAAAYGDILAPYASSIPYHSAQVVDGSYSAIVYNSYHNPHHLENHLPQQPFLGYTTACSGDLHEYTESQSSFISLNTPEASSSRLSAINDLLHNNRNTTAALIAVSTATSDVIPDEASVEEEEEVQEEEEEVEVQETVVEDKVQEDVVHPSEEGDNCEEQAADVAVENDQKEKENTDTTSDTRSEIEETPSEQADENSSESTGAKSKEEDPQPVSSSNNDEATCSTGETDISPTTTENDSTTDEPPATGTETEEKPITDVVTPIVDTVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314301;
- 90% Identity
- -
- 80% Identity
- -