Basic Information

Insect: Cheilosia grossa
Gene Symbol: -
Assembly: GCA_963082955.1
Location: OY720144.1:20178465-20185817[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 3.9e-06 0.00039 21.1 0.9 2 23 687 708 686 708 0.96

2 4 1.9e-06 0.00019 22.1 1.4 1 23 714 738 714 738 0.97

3 4 1.3e-06 0.00012 22.7 3.4 1 23 744 766 744 766 0.98

4 4 0.0005 0.049 14.5 0.7 1 23 775 797 775 797 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	3.9e-06	0.00039	21.1	0.9	2	23	687	708	686	708	0.96
2	4	1.9e-06	0.00019	22.1	1.4	1	23	714	738	714	738	0.97
3	4	1.3e-06	0.00012	22.7	3.4	1	23	744	766	744	766	0.98
4	4	0.0005	0.049	14.5	0.7	1	23	775	797	775	797	0.97

Sequence Information

Coding Sequence: ATGGCCGGATACAGGTGTGTGAACTATTTCGATCTGTGCCGCCTGTGCACAGGCTCTTCCGATTCAAAAATGAATATCTTTTCCATTGAGGGCAAACGGAAGAATTTAAGCAAGAAAATCTCGGACTGCCTGACGGTGGAGGTTGATGAAAAAGATCGTTTGCCAAAAGTGGTGTGCACGTCATGCCTACACACACTCGAATCAATTGTTGAGTTCCGCGACACCTGTTGCAATTCGCAAAGTATGCTAAACAATTGCTTAGCATCGGCCACCTTACAAAACGGTGGCAAAGTGTATATTAAAGATACTTTGAAAACGGGAGCACCAGTCATTACTAGGCCACAACCTAAAGAGAATCCGCTGGAAGCATTCGTACAGGGTCCTGATTTTCTAAGTTCTATAATACAAGCCGTCGGCATACAAcaaaatgaaGAGCAACTTGATCCAAAACCACAAATTCTCCACCAGTACACATTGACACTCGACAAGGGAAGCATAAAGACTGATCAGATAGAGTACAAACTGGAAGAATGTCCAGTAGATCCatcacaacagcagcagcaacagcagcaacagcagcagcaacagcagcagcaacagcaaccgctgcagcAGATACAACTACAGatgcagcagccgcagcaacaacattCCGAGAAACAATCGAAGCATAAtgctCTGGAGGAGTTTCTTAAAATGAAGCCAAACATTCGTGTGACACCAATTAGGAAAAAAGATCCggaacaacagcagcaacagcagcagcagcaacaacagcagcaacagcagcaacagcagcaacaacagcagcagcagcagcagcagcagcaacaacaacagcagcaacagcaaatgCAACTACAACACCAGCAACAGATACAAcaacatcatcagcagcagcaacagttaCAACAGCAGCAGCTGCATATACAACAGACTACCGCGCAACAGTTCATAGCTCAGTTGCAACAACAACAGttacagcagcaacagcaacagcagatAACTATCACACAAGACACTGGTAGTCCAAACAATAAGAAACCGAAATTCAATTTCGTCATCTCAACCCCACAAACGCAAATTCAGCAACAGCCACAGATTCAGCTGCAGCAGCAACATCCGAAAACAATTTCCCTACCAACGCTGACCCAAATGTCGCAACATCCGCAACTGCAGGACATGAAGATCCTCTCGCCCAACAAGTGTTACCTGCCGATAACGATAAAGGACGAGAACTCTGATCAGCAAATAGTTGCGCATATTGATGCGAAGAACTTTGTCCTTCCCACAACGTATCAGCTGCAAATGAAGTTACAGCCGCAGATTGCAACTGTCGATGGGCAACCGATCATGCAATTGACCCCTACATCCATTCCAGCAACGCTACAGTTGGCGCCACAAGGGCTCACCAATACCACGTTCCAAACTACCACAAATACCCATCAATTGCCGACCAATACAATCTTAACTGGTACTAGTGGCATTGATGCGGCAACATCCACCAGCGATCCGGAAGATTTCATTCAGCCAAAGTACAGGATTGCCACGCTGCGTGGTAGTAATTCCATTGCGATGGCAAATTCGAATCAAACTCAACCGCGAACCCTACAGACAGTTCAAGTTCAGAAGCCactacagcagcagcagcaacaacagacgcagcagcagccgcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagcagcagcagcaggtcGGTGGTATTACAGTTCAACGAATAAGCCAACAGAAtgtggtaaaagaaaaagtgacaCCGACTCGTCTGCCAATGCTAAACAAGCAGAATGTCACAATCAGTCGAATATCTAACCAGCAGCCACAGGCGCAGTCGCAaccacagcaacagcaacaacaacagcaagcaccgtcgcaacaacaacagcaacaaccaaTCATCACCCAAGTTGTGCAGATGGCCATTAAAAAGGAACCCATTCTAACTACGCAAACCGAGAATGGCAACAATACATCGTCCGACGGTGGAAGTCAAACAAGCGTCAGCACCACGCCCAAACTCGAATGCCCCACATGTGGCCGAGTGTTCAAGAAAAAGGAACATCTAGCCCAACATGTGAAACTGCACGCAGGCTTGCGCCCGTTCAAATGCTCAGAGGAGGGATGCAACAAAGCATTCAGCCGAAAGGAACATCTCATGCGACATATCGTCTCACATTCCGGCAAGAAGATGTTCAGCTGTGAGATGTGCCAGAAACTATTTTCGCGAAAGGATAATCTCAATAAGCACAAAAGAACTCATACAGATCAAGCTTGTTCAGCGAATTTCGTCTGTGAACTGTGCAATAAAAGTTTCGCCGTGAAAATGTACTACATCCAACACAAGCTGATGCACGAGAAGGACATAGAAGACTCAATTGGGACTGCTCTAAAGgaTGAATCAGATGAAGTGAGTGACGTTAACATGTCAGGGGAAACAGATGAACAAGAGGAAGATCAGCAAGAGCAACAGCAGGaggaagaagaacaacaacaacagcagcaccagcagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaaatagtCCACCAGCAGCAAATAGTACAACAACATCAGCTACTTCAACAACCTCAACAACAAATTATGCAACTGCATCTACCCGTGGTGACAACGCACGACCTCTCCGGACAAACAATAACCATCACTCAATCAAACGATCCCAATCAATCGGCGACCCTAAAGGCGTTGGGCAGTCACGATACCACCGTGCTCAATCTGCCATCGAGTCTAGCAAACTACGTCTCACTCAACCCGGGACAGTTTGTCCAAGCGAACATCGGTGACATCATGGGCCATATCAAAATTGAAAAGTAA
Protein Sequence: MAGYRCVNYFDLCRLCTGSSDSKMNIFSIEGKRKNLSKKISDCLTVEVDEKDRLPKVVCTSCLHTLESIVEFRDTCCNSQSMLNNCLASATLQNGGKVYIKDTLKTGAPVITRPQPKENPLEAFVQGPDFLSSIIQAVGIQQNEEQLDPKPQILHQYTLTLDKGSIKTDQIEYKLEECPVDPSQQQQQQQQQQQQQQQQQQPLQQIQLQMQQPQQQHSEKQSKHNALEEFLKMKPNIRVTPIRKKDPEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQMQLQHQQQIQQHHQQQQQLQQQQLHIQQTTAQQFIAQLQQQQLQQQQQQQITITQDTGSPNNKKPKFNFVISTPQTQIQQQPQIQLQQQHPKTISLPTLTQMSQHPQLQDMKILSPNKCYLPITIKDENSDQQIVAHIDAKNFVLPTTYQLQMKLQPQIATVDGQPIMQLTPTSIPATLQLAPQGLTNTTFQTTTNTHQLPTNTILTGTSGIDAATSTSDPEDFIQPKYRIATLRGSNSIAMANSNQTQPRTLQTVQVQKPLQQQQQQQTQQQPQQQQQQQQQQQQQQQQQQQQVGGITVQRISQQNVVKEKVTPTRLPMLNKQNVTISRISNQQPQAQSQPQQQQQQQQAPSQQQQQQPIITQVVQMAIKKEPILTTQTENGNNTSSDGGSQTSVSTTPKLECPTCGRVFKKKEHLAQHVKLHAGLRPFKCSEEGCNKAFSRKEHLMRHIVSHSGKKMFSCEMCQKLFSRKDNLNKHKRTHTDQACSANFVCELCNKSFAVKMYYIQHKLMHEKDIEDSIGTALKDESDEVSDVNMSGETDEQEEDQQEQQQEEEEQQQQQHQQQQQQQQQQQQQQQQQQQQQQIVHQQQIVQQHQLLQQPQQQIMQLHLPVVTTHDLSGQTITITQSNDPNQSATLKALGSHDTTVLNLPSSLANYVSLNPGQFVQANIGDIMGHIKIEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00314713;
90% Identity: iTF_00315504;
80% Identity: -