Basic Information

Insect: Cheilosia grossa
Gene Symbol: prdm10
Assembly: GCA_963082955.1
Location: OY720147.1:3660779-3664338[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00014 0.014 16.2 0.4 2 23 494 515 493 515 0.96

2 11 0.00052 0.051 14.4 1.7 2 23 548 569 547 569 0.95

3 11 0.00089 0.088 13.7 4.4 1 23 589 611 589 611 0.97

4 11 8e-05 0.0079 17.0 4.0 1 23 619 641 619 641 0.98

5 11 3.6 3.6e+02 2.3 3.3 3 23 647 668 646 668 0.86

6 11 0.18 18 6.4 5.5 1 23 674 697 674 697 0.95

7 11 0.013 1.3 10.0 2.0 1 23 702 724 702 724 0.97

8 11 0.00032 0.031 15.1 0.8 2 23 731 753 730 753 0.96

9 11 3.2e-05 0.0031 18.2 2.2 1 23 810 833 810 833 0.98

10 11 0.002 0.2 12.6 3.7 1 23 855 878 855 878 0.96

11 11 0.85 84 4.3 5.7 1 23 909 932 909 932 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00014	0.014	16.2	0.4	2	23	494	515	493	515	0.96
2	11	0.00052	0.051	14.4	1.7	2	23	548	569	547	569	0.95
3	11	0.00089	0.088	13.7	4.4	1	23	589	611	589	611	0.97
4	11	8e-05	0.0079	17.0	4.0	1	23	619	641	619	641	0.98
5	11	3.6	3.6e+02	2.3	3.3	3	23	647	668	646	668	0.86
6	11	0.18	18	6.4	5.5	1	23	674	697	674	697	0.95
7	11	0.013	1.3	10.0	2.0	1	23	702	724	702	724	0.97
8	11	0.00032	0.031	15.1	0.8	2	23	731	753	730	753	0.96
9	11	3.2e-05	0.0031	18.2	2.2	1	23	810	833	810	833	0.98
10	11	0.002	0.2	12.6	3.7	1	23	855	878	855	878	0.96
11	11	0.85	84	4.3	5.7	1	23	909	932	909	932	0.97

Sequence Information

Coding Sequence: ATGGCTGAAAGTTTGGATAATTCAGAAAATAATTTAGAAGCAAAGAACCAGTACCTCTATGGAGGATTCAATAGAATCAGTTCGTACGATCCGAATATGTGTACCACAGCAGCTCGGTTCAGTCCCTTCtatgaaaaaaacaacactgTGCTGCCCAATGAAGCCACCGAGATGGCATACAAAAATCGTACTTATGTGCAATCTAGCAATGAGAAGGTCCACGCTAATGATTCCTCTAACAGCTTGGACCCAACCAGTGATGCATCTAAAATTGTGGATCCATCCTACCTTAACTATAACAGTGAATTGTTGATTGAACAACAGAATGCCGGCGCACAAGTGTTTGTTCGAAATCAAATAGAAAGTACTGTAACATTCAATGACGAGGAGCAGGATGTGTCTGTTCTATGCAATGGCGATGGAATTGATTATGTCCACCAAATCGATCAAGGCATTGATGAGGTGACAGGTGAACCTATAACTGCCGGTATCGTATTGCATCGTTCGCCAAACGGCCATCTGTATCAAAACTTCTACGTGACGAATGACGGCGAAACACCTGGTGAAATTGTCGAGCTAGTTCCAATAGACACTTGCAATCCAAATCGCTTGGAAGAGATCGAGGGCAATAGCTATGTAATGCAGCCGTATGATTTTCCAACCGAATGCAATATGGAAACGTTTGAAACTCATCTGCACGCCGAAAGCCAGCAGATGATTTCCcacgaaaatgttgaaaatcatGGACAGTTATTGGCCGCACAAATGCTGGAAAGAGAGCAACAACGCATTTTACTAGAGAGAACGATGTCACCATTGCTCGCTGCGGTAAATGATATAACTCAAAGAGACGCAGAGCTGCTTTCATATCTCAATCAACATGTCGAAAAGGAACAAGTAATGCAGGAGACAGTCCATCCGCAAGACGAATATCAAACTGAACTCACTGAGCGTAATGGAGAACAATATTCggaagaagacgacgacgactacaACAAACCAGTGGAGAGCCGAGCGAGAGCTACCATCCCCACCAAATATGTCTATCTTGGAACCGTGAATGCTGATACTAATGAGCCGTCAGTTTTTGCCAAGAAAGCGATTCCACAAAGAACCAAGTTTGGTCCATTCGAAGGAGAGATCCGTTTCGCCAGTGATATATTCTTAAACATCTTACGTGCTCAAGATCCACGCCACTATCCGCTTTTGCTTGTTGGAAAATCCCGAGTTCTCATTGTCACTAATGAAAACACGTCCAATTGGATGCGATTTGTCCGTTTCGCCCAATCATATGCggaacaaaatttacaaattatcgAGCAAAACGATCGCATTTACTTTAAATGCAATCGGGATATTTCTGCCAAGGAAGAGCTGCGAGTGGGCTACCACAAAACGTATGCTGATAAATACGGCCTACCGATTTTAGAACCGTCCATGAAAGACGCTCAAAAAAAGTACGAACTAGATAATCCGTGGATGTGCTTCGAGTGCGATCAACGATTCGCAACATCGAAAGATATGCAAAGGCATTTGGAGGTGCACGATGTAGAAGATGCGTCTTGTATCATTTCTAAAAGGAAAAtcaaacgaaaacgaaagaaCATCAAACAAATTTCGGAATTGCCTAAAAATTCTAGCAGGTGCTTGGTTTGCTACAAGGTTTTCATGACCAACTCgagtcttaagaaacatttcgcAAAGCATTTGGTTGCTGTAAAGTCAAGGCCCAGGACTGGCGTTAAGATGTCAGAGCGATTTCCTCATAAATGTTCACTTTGCTATAGGAAATTTTCAACAGAAGATAAACTAACGTCGCACCAGCTAAATCACTCGGACGACAAGGAGAAACCCCACAAATGTCCTCATTGTGATCAGCACTGCACTACCCCAGCTGCACTGGCGGCCCACGTTCGTAGCCACACAAATCGAGCATATTGCTGCATTTACTGCCAGCAAACCTACAAGTACGTGGTGGATTTTAAGCAACATTTCGAGCAGCACTGCATAGATGGACATTATCCCTGCATTCACTGCAACAAGAAGTACAAAAAGTATCACTTGGCTCGGAAGCATATACGTATCTTTCACCCAGCAGTGAAATACCCATGCAATGAATGCGATCGCTTGTTCCTTCACATGAGTTACTTACGCCGTCACAAGGCATCGCacgcgaaaaagaaaaatctccaTTGCTCCGAATGTGAACTAATATTCGGAAGAAAGCCGGACCTTAAACAGCATATGAAAAGTGTGCACAAAGTGAAACGAAAGGTCAAGAAAAAGACAGCAACAGCAAAAGAAGAAAGGCACGCAAATGTGGAGAATGACGGCTCTCAGTACCTACAATTTACTCCGAAGAAAAAAAGTCTGCCGACTGAGGCTAAAGTGAATTTCGCTTGTTCCGAAGGCTACCTCAAACACCCGTTCAAATGTGAAGATTGCAAGTTGGGCTTCAAGCGACGCGGAATGCTAGTCAATCACATGTGTAAAGTGCACCCTTATCGAAGTATCGATTCCGTTGAGGTGCTAAATCAACCGATTGTCAAGCTACAAACCTTATTCAATTGTCCGCACTGCTCCAAGACATACAAAAATAACGCAAAGCGAAAGCTGCACATTTTAAAGAATCACCCCGGCATGGAGTTGCCTCCATCTTTTCGCGGTAATTCAGCTTTAGATGATGCCAATGTTCAGACTGTCGGGTGTTACAAGACTGATGTGCATAAGTGCCAGTTGTGTTTCAAGCAATATGCTATTCGGAATTGTCTACTTGCGCACTATCGAAAGTCCCACCCGAACGAAAGGCTACCAGAAATTTCACCCGTTATACCAGCATCTGAAGTAATTTTGATTCAAGAAGAAAGCGTCGACCGGGTCATGAATATTTTTAGACCCCCCGTCTCGCcagaaaataaacttttgaaaCTCTCCTCTGCCGCACTTGAGTTGTCCAGCATTGAAGACAGAAAGTACTTTCATTTTCTCAACGAGCGTTCAGTTACGACTGATATCGGTGATAGGAATGGAAGCAGCTTTAAAATAGAAGAAAGTGAATTCGGAGAGACTTCATCGAATACGGAATTGAATCACTTGCCTGAGCTTTTCGAAGAGTCCATTGCTTGTATTTAA
Protein Sequence: MAESLDNSENNLEAKNQYLYGGFNRISSYDPNMCTTAARFSPFYEKNNTVLPNEATEMAYKNRTYVQSSNEKVHANDSSNSLDPTSDASKIVDPSYLNYNSELLIEQQNAGAQVFVRNQIESTVTFNDEEQDVSVLCNGDGIDYVHQIDQGIDEVTGEPITAGIVLHRSPNGHLYQNFYVTNDGETPGEIVELVPIDTCNPNRLEEIEGNSYVMQPYDFPTECNMETFETHLHAESQQMISHENVENHGQLLAAQMLEREQQRILLERTMSPLLAAVNDITQRDAELLSYLNQHVEKEQVMQETVHPQDEYQTELTERNGEQYSEEDDDDYNKPVESRARATIPTKYVYLGTVNADTNEPSVFAKKAIPQRTKFGPFEGEIRFASDIFLNILRAQDPRHYPLLLVGKSRVLIVTNENTSNWMRFVRFAQSYAEQNLQIIEQNDRIYFKCNRDISAKEELRVGYHKTYADKYGLPILEPSMKDAQKKYELDNPWMCFECDQRFATSKDMQRHLEVHDVEDASCIISKRKIKRKRKNIKQISELPKNSSRCLVCYKVFMTNSSLKKHFAKHLVAVKSRPRTGVKMSERFPHKCSLCYRKFSTEDKLTSHQLNHSDDKEKPHKCPHCDQHCTTPAALAAHVRSHTNRAYCCIYCQQTYKYVVDFKQHFEQHCIDGHYPCIHCNKKYKKYHLARKHIRIFHPAVKYPCNECDRLFLHMSYLRRHKASHAKKKNLHCSECELIFGRKPDLKQHMKSVHKVKRKVKKKTATAKEERHANVENDGSQYLQFTPKKKSLPTEAKVNFACSEGYLKHPFKCEDCKLGFKRRGMLVNHMCKVHPYRSIDSVEVLNQPIVKLQTLFNCPHCSKTYKNNAKRKLHILKNHPGMELPPSFRGNSALDDANVQTVGCYKTDVHKCQLCFKQYAIRNCLLAHYRKSHPNERLPEISPVIPASEVILIQEESVDRVMNIFRPPVSPENKLLKLSSAALELSSIEDRKYFHFLNERSVTTDIGDRNGSSFKIEESEFGETSSNTELNHLPELFEESIACI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00316315; iTF_00315498; iTF_00314658; iTF_00312120; iTF_00313781; iTF_00312954;
90% Identity: iTF_00316315;
80% Identity: -