Basic Information

Insect: Cheilosia grossa
Gene Symbol: Znf541
Assembly: GCA_963082955.1
Location: OY720144.1:99238361-99250935[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 2.3e-05 0.0023 18.7 0.2 2 23 210 231 209 231 0.97

2 6 1.6e-06 0.00016 22.3 1.5 1 23 237 259 237 259 0.99

3 6 9.4e-05 0.0092 16.8 2.6 1 23 265 289 265 290 0.95

4 6 0.00046 0.045 14.6 0.8 2 23 535 556 534 556 0.97

5 6 0.0038 0.37 11.7 0.7 1 23 1526 1550 1526 1550 0.95

6 6 0.00011 0.011 16.5 0.7 1 23 1584 1606 1584 1606 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	2.3e-05	0.0023	18.7	0.2	2	23	210	231	209	231	0.97
2	6	1.6e-06	0.00016	22.3	1.5	1	23	237	259	237	259	0.99
3	6	9.4e-05	0.0092	16.8	2.6	1	23	265	289	265	290	0.95
4	6	0.00046	0.045	14.6	0.8	2	23	535	556	534	556	0.97
5	6	0.0038	0.37	11.7	0.7	1	23	1526	1550	1526	1550	0.95
6	6	0.00011	0.011	16.5	0.7	1	23	1584	1606	1584	1606	0.98

Sequence Information

Coding Sequence: ATGTGTAGTGCCTCTATGGGTGCCGAAGGATCGGTTACATTGCAATTACGAGAGGCTATTCATTCGTCGGATTCATCGTCGGTTGATGGTTGTTCATCGCTGGATAATGCTCTGACGATTGGTTATCCGGATCCGGATATGTTAGCCGATGTGTTAGGTACTCTACAAACTGCATCACTCAACAATAACACAAACAATAATAACACGATGATTAGTGCCATAACTCTGGAGAGTGTAGATGGTAGTAAACTCAACGATATCGGTTCAAAAATCAGCAGCACACCCAACAATAGTAACAATAATTACGGTGGCGGGGGCTGCGGCGGCGGCCAGGGCCAGGGCCAGGGCAAGAGCAATAGCAACAGTAAGACCTGCAACAATAACAGCCTTATTAGCTGCAGCAGTAATCTATCGCTGAGCAGTCCTATTAGCGGGCAATTAATCAGCATCACCGGTAGTAGCAGCGCCAGCAGTGGAAGTAGTAGTAATTGTAGTATAACCAGTAATAGCAGTTGTAGCAGTAGCAGTAATGAGAGTATATCAAACGTATCAGTTCCTGGATCTAATCCACCGATTGTAAAGAAACAAAGACCCAAAACATCATCCCCCACGCGACATGGACCCCAACAGTGTCAGGTTTGCAATAAAGTATTTGGAAATGCATCTGCTTTGGCGAAGCACAAATTAACGCATAGCGATGAGAGGAAGTACGTTTGTGTGATGTGTTCAAAAGCGTTCAAAAGACAGGACCATTTAAATGGCCACATGATGACTCATAGAAATAAGAAACCATACGAATGCAAGGCTGAAGGTTGCGGCAAGTCTTATTGTGATGCAAGATCATTGAGGCGGCACACGGAAAACCATCACAGTGGACTGGCGGCGGCCGCAACCACTCCTCAGAATCAATCATCCTCCCTTTCGCCGTCAACCGGGCCGCCAACAGGACTCAGTTTGTCACCAGCAACTGCCAGtgGAGATGCTAGTTCACCCCACGGAGCAAACTGTATTCAGTATACAACTACGGGAGGTGGTGACGacggcagtggcagcagcaccAACAGCAACAGCTCTTTGAAACAATCATCGTCCGCTGTGAACGTCTCAGTGGTATCATCATCCACCCAAGCGAGTTCGTCTTCACAATGCTACTCATCAACGCCTTCTCCTGCTTCATCGCCTTCGCCGAACACCTCAACCAAATCGGTTGCTGCCAATGACGGACTCACTAGGCAGCAACTGGATCTCATTAGTCAAATTATGCAACAGACGAAGCAGGGAAATACCCAAGTGACTGTTGCAACCAGCACTGCGACTTTGAAGATAGCAAATCAACCGCCATCACCCCACCAGAGTCAGGCGCAAGGCCCACAGCAACAGTTGCAGAGACCAAGGACATGGAATATGCAGACCCAGTTGCAGCAGACACAGTCAAAAGTCTCATCTGTATCGGTCATGGATAATGCCACATCACCGATCACCTCAATCTCCATCAATGAACTACTCAACGGAAGTGGAtcgcatcagcagcagcagctaaCGAGTGCCGGCGGGATGAGtcaacaaattttgaatattgtcAAACTAGAGCAGAAACCTGTAGAGTGCAATCTTTGTCATAGAAAGTTTAAGAACGTCCCAGCTCTAAACGGACACATGCGTCTGCATGGGGGCTACTTCAAAAAGGAGGCAGAGGCGAAGAAGTGTGACCGAAAAGACGGACTCGGTCCGCCGCTACAAACGGCCAGCATTGGTGTTCGAGCTCTGATCGAGGAGAAGATCATCAGCAAGCGATGTAAAGATTTGAAgGGTGCCTTTGTGGTTCCTGCTCCACCCATAGCGGCAGCCGTTAGACGGGCAGCCAGTGACCTAGAAAACTTCTTGGCCCCCAAGTCACCGATAGTACTACAAGCGGGTGGCTCACCGTCCGAAAGGAACGGCAACCTAGCCGACATCGGAACCACCACAGTGCTTCCGCCGGGCCTGCAAATTCAGAAACAATCAACGCCAATCCACCAGAAACCAACAAATGTCAGTGTTGGCACGGCGACAGTAGCGACAAACACTTCGAAGGGTACGTCCACAATGGACCACAAAGACGCGACTCTGATAGAGCTCCTGAAGCGTGGTACAAAGGTAGCGGTTCGCAAGACATCGGGCTCCGATTCTAGTCAAATATTCACTACCACCAATGGAACGCTTATGCTACCGTCAGAGCTGTCGCTGTCGTCGTCGGGCACATCGAACCCACCACTCGCGATAACCCTACCGAATGGAGAAACCACACCTTTGTCGCTGACAATATCGCAAGCCTCGAATGGTTCCGGTGATGTGTACACCCTTACATATTCAACTGATTCATCGGCGTCGTTTTTTGAAGACAGCGACGTGTACAGTGTATCTGAGACGGACATGCTCCTGCAGACGGTCGACTCTATGCAATTGCTGAACGAGTCCGAAGCGCCAGACCCAATGGATGAGATAAGCTCTCTGAGCAACTTTCCAACTGAGACCAGATCCTCGTCCAGCTTGAGGGAGATTAGTAGTCGGTCCAGCAAAGACATTCAAGCGGTGTTTAGTTCCCCCTTGCAAGAGGCATTGCCCAATTTCCAAACACTTCATTCCAAGGATTTCGTCCTATACAACAACGGCACCTGCAAGGCTTTAAGTGGTGGGAGCCAAACTGCAAGCACTGTTGTCAAAGAATCGCTATCTCCTCTTCCATCGCCGCTCGCGTACCCAACGCCACCAGCAAGTCATGAGACAGTCACACAATCGTCACCATTCCTGGATGACTCCCATCATTTTTCGGATGCAGCGAACTCCTTCTTTCAGGAGAAGTCCACGTCTGATTTTATTGACGACGCGGGCGGAACCTTCTTCAAGGACTGTTCCAATGACGCGCTCACCGAGAGCGAGAAAATCCTCAAGCTGAAGAGTGTACTCGAGGACAGTGGACAGTTCTTCAAGTCGAACGATAACTCGACGGATGTGTTTGACACCTCTGTGGTCAAGGTGGAAGACCTCCTTAACGAGTCGAATGACGAGGCGAACTGTGATCTCAAGGACTTTGCCGAACAGAATCTGTCGTTCTTGGATGACGCCCAGGGCTTTCTTGATGACTCCCGCAACGCAACTTCCCCGCTATCAGAGTCCTTCTTCACCAGTGGCATTGGCACAGCCGAAGAAGTGAAGGAAGTGCTGCGCGACGTCCTGCCCCACGAGTCACTTAACTGTGACCCGCAAAACTCCACCGACATCGATCTGTATTACCTGCCCGGATTGGGCCTACAGTCGCAAATGATGCCGAACTCGGAAGATCCGCTCCTGTCGTCCTCCCCACGTGACTTTGGCCACAGATTCCATGCGCAAGCACACATCCACCATCAGCAGTCACAGTTGCTACGCATGGAGCAGTCAACTGCGGCAGCCCTCCAAGAACAATTACTCCCCAAGAAACCTGATCCCGACTCAAGCTTCCCATTGCTAATGGCTACCAGTACATCCCGAGATGGAAGCACccaattccatttcaacattcaGCAGCAGGAGATCAAGCAAGACAACGAAACCGACATTAAGCCTGACATATCCATGGTTCCACTGTGTGTAGAGACAGGGCCGCCGCCGGCGCCACCACTTCCGCCTTCGTTCAAGGATAATGCCACCCAACTGGAAACATCGCAGTTCTTCGTGCCAAGTGAAATCACCGCCCAACAAAGCCAGCCACTTAACGTTCTATCCGCGTCAACTACAGCTCCATCACCGCTGACCAGTTCCATCCTCAAGAGGAGATTGCGCCAGGGATCTCTCGGCGGCGACAGCAACTCACAGCACAGCAGTATTCCCCGCAAGTACGAACTGTACAAGTCGAAGCTGCGAAAGCCATCCACAACGCACTACACACCCCAGCCCATTCTCAATCCGGACCGCAAGGGTAACGGCTTGTACTCCAACCTACCCAAACCACCGACCTTCCATCAGGACGCCCTTCATTTGGACGATGAATTCGAGGAGGCTGCCAGCCTGATGGCCTTCCTCGATGAGTCCAAAGTGAACATAGGCACCGCATATCAAGCTACAATTCCAGCTATGGAGAGACGAAGTGACTCGCAAGCATTTAGCGGCCCAGCCCAAGCTACGGACTACGAAGAACTAATGTGGGATCCATGTGTGGCCACCGATGACAAGATTCTGACCCGATACATCGAGCTAAGCAAGTCCTCAGCCATTCCACTTGGTTACCACTCAGAAGAGGTCGCCCTGAAGGCACTACTCCAGGCCCAGGGTGACACGCCCATAGCAGTGCTGAATCTCTTAAAGTCGCAATCGAGCCCCTTCCAGCTGAAGTGGTCTTCGCTGGAAGTCGAAATGTTCCTCAGGGGTCTGGAGAAGTACGGAAAGGACTTCTACACCATTGCCAGAGAAATCATAACTAAGTCAACCAGCGAGTGCATTCAGCTGTACTACTTCTGGAAGAAGCTCTGTGTCGACTACAAGGCGACTCACTTGAAGATCGAAACGGAAGACACAAGTCAGTCGCAATTCTCTGCGCACGCTTCGGAGCTTCGTCCTCACGTCTGCGAAATGCCAGATTGTTCTGCTAGCTTCACCTCTAAGGCGGCACTACATGGCCACACACGGATCCACTGTATCGGACGGAATGTGCATCAGCTGAGCAACAACAGCGGTTCCATGATATTTGCCAACAATGGCCAGTTGCAAGCCCATGCAAACATAAAGGACGACTATCCCTGCAAGGTGTGCGGCAAAGTTTTCAACAAAGTCAAAAGCAGAAGTGCGCATATGAAATCGCATCGTCCTCAGGAAAACGATCCAACcaatcagcaacagcagcaaccacCACCTCCActaccaccaccagcagcaccagcaccagcaccacaacaacaacaaaatacaaactcATCATAA
Protein Sequence: MCSASMGAEGSVTLQLREAIHSSDSSSVDGCSSLDNALTIGYPDPDMLADVLGTLQTASLNNNTNNNNTMISAITLESVDGSKLNDIGSKISSTPNNSNNNYGGGGCGGGQGQGQGKSNSNSKTCNNNSLISCSSNLSLSSPISGQLISITGSSSASSGSSSNCSITSNSSCSSSSNESISNVSVPGSNPPIVKKQRPKTSSPTRHGPQQCQVCNKVFGNASALAKHKLTHSDERKYVCVMCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSGLAAAATTPQNQSSSLSPSTGPPTGLSLSPATASGDASSPHGANCIQYTTTGGGDDGSGSSTNSNSSLKQSSSAVNVSVVSSSTQASSSSQCYSSTPSPASSPSPNTSTKSVAANDGLTRQQLDLISQIMQQTKQGNTQVTVATSTATLKIANQPPSPHQSQAQGPQQQLQRPRTWNMQTQLQQTQSKVSSVSVMDNATSPITSISINELLNGSGSHQQQQLTSAGGMSQQILNIVKLEQKPVECNLCHRKFKNVPALNGHMRLHGGYFKKEAEAKKCDRKDGLGPPLQTASIGVRALIEEKIISKRCKDLKGAFVVPAPPIAAAVRRAASDLENFLAPKSPIVLQAGGSPSERNGNLADIGTTTVLPPGLQIQKQSTPIHQKPTNVSVGTATVATNTSKGTSTMDHKDATLIELLKRGTKVAVRKTSGSDSSQIFTTTNGTLMLPSELSLSSSGTSNPPLAITLPNGETTPLSLTISQASNGSGDVYTLTYSTDSSASFFEDSDVYSVSETDMLLQTVDSMQLLNESEAPDPMDEISSLSNFPTETRSSSSLREISSRSSKDIQAVFSSPLQEALPNFQTLHSKDFVLYNNGTCKALSGGSQTASTVVKESLSPLPSPLAYPTPPASHETVTQSSPFLDDSHHFSDAANSFFQEKSTSDFIDDAGGTFFKDCSNDALTESEKILKLKSVLEDSGQFFKSNDNSTDVFDTSVVKVEDLLNESNDEANCDLKDFAEQNLSFLDDAQGFLDDSRNATSPLSESFFTSGIGTAEEVKEVLRDVLPHESLNCDPQNSTDIDLYYLPGLGLQSQMMPNSEDPLLSSSPRDFGHRFHAQAHIHHQQSQLLRMEQSTAAALQEQLLPKKPDPDSSFPLLMATSTSRDGSTQFHFNIQQQEIKQDNETDIKPDISMVPLCVETGPPPAPPLPPSFKDNATQLETSQFFVPSEITAQQSQPLNVLSASTTAPSPLTSSILKRRLRQGSLGGDSNSQHSSIPRKYELYKSKLRKPSTTHYTPQPILNPDRKGNGLYSNLPKPPTFHQDALHLDDEFEEAASLMAFLDESKVNIGTAYQATIPAMERRSDSQAFSGPAQATDYEELMWDPCVATDDKILTRYIELSKSSAIPLGYHSEEVALKALLQAQGDTPIAVLNLLKSQSSPFQLKWSSLEVEMFLRGLEKYGKDFYTIAREIITKSTSECIQLYYFWKKLCVDYKATHLKIETEDTSQSQFSAHASELRPHVCEMPDCSASFTSKAALHGHTRIHCIGRNVHQLSNNSGSMIFANNGQLQAHANIKDDYPCKVCGKVFNKVKSRSAHMKSHRPQENDPTNQQQQQPPPPLPPPAAPAPAPQQQQNTNSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01522200;
90% Identity: iTF_00313421;
80% Identity: iTF_00310995;