Cgro010622.1
Basic Information
- Insect
- Cheilosia grossa
- Gene Symbol
- ZNF629
- Assembly
- GCA_963082955.1
- Location
- OY720145.1:62513176-62515816[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 6.3e-05 0.0062 17.3 0.3 1 23 166 189 166 189 0.95 2 13 0.0031 0.31 12.0 0.9 2 23 196 218 195 218 0.95 3 13 1.8 1.8e+02 3.3 0.5 2 10 226 234 225 236 0.86 4 13 0.031 3.1 8.8 1.5 2 23 268 289 267 289 0.98 5 13 0.00035 0.035 14.9 1.2 1 23 295 318 295 318 0.96 6 13 0.0034 0.33 11.9 2.5 2 23 327 348 326 348 0.96 7 13 0.0085 0.84 10.6 1.0 1 23 356 379 356 379 0.88 8 13 0.019 1.9 9.5 4.4 1 20 386 405 386 409 0.95 9 13 1.5e-05 0.0015 19.3 1.7 1 23 415 437 415 437 0.97 10 13 6.5e-07 6.4e-05 23.5 2.6 2 23 443 464 442 464 0.97 11 13 0.0023 0.23 12.4 2.9 1 23 470 492 470 492 0.98 12 13 0.0019 0.19 12.6 2.7 1 23 497 519 497 519 0.98 13 13 0.00019 0.019 15.8 0.1 1 23 524 547 524 547 0.97
Sequence Information
- Coding Sequence
- ATGCAGGCTTCCTACGATTTTATAAAAGCATCTTGTGATGCCGATAAACTCCTGCGTAATAGTCTGGTTTTCTACGACCACTTTGAAGTCAACAATATCCCACCGAAAATTGATGAGTTGGTAAAAAAGGAAGAACACATTGGTGTGGAATATGTAGGTGTTCATTCCTCTCCAGATTATATAGATGATCTTGGAAACACGAATGCACTAGCTAAGGAAGAAAATACTGAAGAGCTGCCAAAATTTGAGGTAGTTATTCCGAATCATGAAATACTTATTGAAGAAAACAACGGCGAACCGCACATGGAAGGCGGTAATGATTGGGGATTCTTGGAGTCAGATGATGGTACTGCCGAAAACGGAAAGGAAACGGTGAGTTTCAAACGAAAAGTCGAAGAATCTTTACACATCCGTTTAGataatgtaaaacaaaacagcTATTCGAGTGATGAATCAGCGGAACCACGGGGTAAATCGCCACAACTAAGAGAAAACTATATATGCCACTGGTGTGGTGAAGCCTTCAATTCCAGATCAGATATTGTAAAACATCGTTCGATAGATCATCAGGGTAAATTACCCAGCTCTTGTTTGACATGTGGTGAGAAATGCCCCGACGAACCCAGTCTGAAACGGCATGTGAAAAAAGAAcatggtattcaaagaaaaccaGTTGTATGTCCGTACTGTAAAAAGACAGTGAAAGGCATAGCCATACATATAAAGTACAATCATCCAGATGTTTGGCGATTGCCTATGAAGTCGGCTCCCGAAGGTGAGACCGTTAAACTGTACAAAAACCAGTGCCCACACTGTCTACGTTACTACCAAAGTAAAAGTATTCTGATGGATCATATTAACACACACACAGGCGAACGACCATATTCCTGTTCTACTTGTAAGAAATCGTTCCAAAAGAAAACTGTCTTGGAGAGACATGAAGCTACTGCTCACCTGTCATTTGACGCACCAAAGCAAACATGCAGCTTGTGCGACTTCTCCACATCCAATCCGTTTTCCTTAAAAACCCACGTGAATCACCATTCGCGACCGATTGAAAAGAAATACCTCTGCTCTTTCTGTCcgCGGAAATTCTACAGTCCAAAGGTCCTTGAACGGCACGAAGACTACAAGCATAACAACGGAGAAAAGCCCTTCAAATGTGATGTATGCTCGAAGGGCTTCTGCATCAAGCGTAAACTAAAGGAGCACATATTATGCGTGCATACGAAGGGTAGTCTGCACGAGTGTTTAGAGTGTGGGAAAACATTTAAGAACGATTTCCAACTGAAGGCACACTGGAAATTGCACACATCAAAGCAGATTGAATGTTCGCAATGTGATAAAAAATTCTGCCGCAATATTGACTTGAGAATTCACATGAGAACGCATACGGGCGAATTGCCGTATGCCTGCCATCTTTGCGACAAACGTTATTCGATTAAAGTGAGACTTACATATCACTTGCAGAAGCACATGGGCTACAAGCACAAGTGTGACCAATGCCCGAATGAATACAGTAGTAGGGCGAAATTGCGGTTGCATATGTTCAAACACATTGGAATGCCATATATTTGTGAACTTTGCCCAAAGGGATATCCGAACCGAATCGGTCTACGCCGACATTCAAAAACTGTGCACAGGAGAATTTTAACCGAGCAAGACCTAGTAGAAAATCGTCGAAGGAATGAAAAGACAATCGTCATTGGACTTGTAAATAACATGGATTTGGTTACTGGTAAATCAATTGTCCCCGTATCTGCTAACCAGCCTGAAATCGAATTGgaaatttga
- Protein Sequence
- MQASYDFIKASCDADKLLRNSLVFYDHFEVNNIPPKIDELVKKEEHIGVEYVGVHSSPDYIDDLGNTNALAKEENTEELPKFEVVIPNHEILIEENNGEPHMEGGNDWGFLESDDGTAENGKETVSFKRKVEESLHIRLDNVKQNSYSSDESAEPRGKSPQLRENYICHWCGEAFNSRSDIVKHRSIDHQGKLPSSCLTCGEKCPDEPSLKRHVKKEHGIQRKPVVCPYCKKTVKGIAIHIKYNHPDVWRLPMKSAPEGETVKLYKNQCPHCLRYYQSKSILMDHINTHTGERPYSCSTCKKSFQKKTVLERHEATAHLSFDAPKQTCSLCDFSTSNPFSLKTHVNHHSRPIEKKYLCSFCPRKFYSPKVLERHEDYKHNNGEKPFKCDVCSKGFCIKRKLKEHILCVHTKGSLHECLECGKTFKNDFQLKAHWKLHTSKQIECSQCDKKFCRNIDLRIHMRTHTGELPYACHLCDKRYSIKVRLTYHLQKHMGYKHKCDQCPNEYSSRAKLRLHMFKHIGMPYICELCPKGYPNRIGLRRHSKTVHRRILTEQDLVENRRRNEKTIVIGLVNNMDLVTGKSIVPVSANQPEIELEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00313743;
- 90% Identity
- -
- 80% Identity
- -