Basic Information

Insect: Cheilosia grossa
Gene Symbol: -
Assembly: GCA_963082955.1
Location: OY720144.1:11787724-11789217[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 5 5e+02 1.9 0.2 3 23 86 106 84 106 0.88

2 13 3.7e-05 0.0036 18.0 0.6 1 23 159 182 159 182 0.98

3 13 0.00017 0.017 15.9 2.6 2 23 191 212 191 212 0.97

4 13 3e-06 0.0003 21.5 1.4 1 23 218 240 218 240 0.99

5 13 6.2e-07 6.1e-05 23.6 0.9 1 23 246 268 246 268 0.99

6 13 9e-05 0.0089 16.8 4.7 2 23 274 295 273 295 0.96

7 13 2e-05 0.002 18.9 4.5 1 23 301 323 301 323 0.99

8 13 1.2e-06 0.00011 22.8 1.4 1 23 329 351 329 351 0.99

9 13 3.7e-05 0.0036 18.0 2.2 1 23 357 379 357 379 0.99

10 13 1.1e-05 0.0011 19.6 0.2 1 23 385 407 385 407 0.96

11 13 1.4e-05 0.0013 19.4 0.2 1 23 413 435 413 435 0.98

12 13 2.3e-06 0.00023 21.8 1.3 1 23 441 463 441 463 0.98

13 13 0.00028 0.027 15.3 0.3 1 23 469 492 469 492 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	5	5e+02	1.9	0.2	3	23	86	106	84	106	0.88
2	13	3.7e-05	0.0036	18.0	0.6	1	23	159	182	159	182	0.98
3	13	0.00017	0.017	15.9	2.6	2	23	191	212	191	212	0.97
4	13	3e-06	0.0003	21.5	1.4	1	23	218	240	218	240	0.99
5	13	6.2e-07	6.1e-05	23.6	0.9	1	23	246	268	246	268	0.99
6	13	9e-05	0.0089	16.8	4.7	2	23	274	295	273	295	0.96
7	13	2e-05	0.002	18.9	4.5	1	23	301	323	301	323	0.99
8	13	1.2e-06	0.00011	22.8	1.4	1	23	329	351	329	351	0.99
9	13	3.7e-05	0.0036	18.0	2.2	1	23	357	379	357	379	0.99
10	13	1.1e-05	0.0011	19.6	0.2	1	23	385	407	385	407	0.96
11	13	1.4e-05	0.0013	19.4	0.2	1	23	413	435	413	435	0.98
12	13	2.3e-06	0.00023	21.8	1.3	1	23	441	463	441	463	0.98
13	13	0.00028	0.027	15.3	0.3	1	23	469	492	469	492	0.95

Sequence Information

Coding Sequence: ATGGATGGTGAGATGACACAAATCAAGTTCTCCGATATGGTCAAGGACGGCAACTGCAGCTTTTCCGATTGGCCTGACGAGGATGAAGACGAAGATGATCATATCAGCGGGATTCTACTTACCGAGGATATGATTAAACAAGAACCCGAATTCATTGTCGACTCCAACGACATCAATGAGGAACAGAAAATACGGACATTTCTCAAGAAGGTCAACATTGACGATGAGGAGAGGCAAAAGCTCAACTGGCTCACTTGTATACTGTGTGATGAGCGCTTTTTATCAACCAAAGAACTATCCCTACACGTGCAGGAACATGCCAAAGCTGCCATTAAAGAGGAAGGAGACGAAATGCAGCCTACAAAGGAGCTTACCCACCGACAGGCACCGAAAACGCAATATACTGGCTTCACTAGACAGGAACTCTTTCAGGATTACATAAACATCAGCGTCGAGTTGGATGGCAAGGCGACATATACCTGTAAACTGTGCCCCAACAAAGTGTTCGCACGGCAAGTGTCTATGCGAAATCACATGCGCATTCACGAGAATCCAACTTATAAAGAACGCTCATGTCATATCTGCAAAAAGACATTCCTGCGAAGGGACACATTGCTAGTGCACTTGCGCATTCATAGCAATGAGCGGAATTATAAGTGCGACGTCTGCGAGGCCTCTTTCTCACATTCCAGTTCGCTGGTGTCGCACAAGCGTATCCACACCGGCGAAAAACCATATGTATGTTCGATTTGTTCAAAGTCCTTTCGCGAGTCTGGTCAATTGACCGCACACAAGAAGACCCACTTCGAGAAGCTTTTGCAATGCCCCAAGTGTGAGAAGAAATTCACTTCCAACAAGACGCTTCGTGTACACTGCCGAACCCATACCGATGAGCGTCCCTACACCTGCACCTACTGCGGAAAGATGTTCCGCTGCAGTACCAGCCTGACAACACACCTGCGTGTGCATACTGGAGAAAAGCCCTACAAATGCGAAATATGCTCATATGCAACCAAACAGTCGGGATATCTTCGCACTCATATGCGAACGCACACCGGCGAAAGACCGTACAAATGTTTGTACTGCGAAAAAGCCTTCTCGGAGAAGAAGCGATTAATTACCCACACTCGCAGCCACACGGGCGAACGGCCGTACCCGTGTATTTACTGCGATGCGGCATTCGCGCGAAACGATAACCTCAAGTACCATCTGCGGACGCACACCGGTGAAAAGCCGTTCGAGTGCGCCGAATGTGGCAAGCGATTCACTCAGGGTAATGCCCTCAGTATGCACCAAAAGATTCACACCGGTGTCAAACCATACTCTTGCCCACACTGCGACATGAAATTCAGACAAAGCGGGACTTTGGTCACTCACCTGCTAATGCACACGAACGAGCGGCCGTTCAAGTGTGATCTCTGTGAGTCGGGATTCAGGCAGAGGGCTTTGCTGAAGAAGCATGTCGCCAGTGTCCATGGGAGCATAATGAAATAG
Protein Sequence: MDGEMTQIKFSDMVKDGNCSFSDWPDEDEDEDDHISGILLTEDMIKQEPEFIVDSNDINEEQKIRTFLKKVNIDDEERQKLNWLTCILCDERFLSTKELSLHVQEHAKAAIKEEGDEMQPTKELTHRQAPKTQYTGFTRQELFQDYINISVELDGKATYTCKLCPNKVFARQVSMRNHMRIHENPTYKERSCHICKKTFLRRDTLLVHLRIHSNERNYKCDVCEASFSHSSSLVSHKRIHTGEKPYVCSICSKSFRESGQLTAHKKTHFEKLLQCPKCEKKFTSNKTLRVHCRTHTDERPYTCTYCGKMFRCSTSLTTHLRVHTGEKPYKCEICSYATKQSGYLRTHMRTHTGERPYKCLYCEKAFSEKKRLITHTRSHTGERPYPCIYCDAAFARNDNLKYHLRTHTGEKPFECAECGKRFTQGNALSMHQKIHTGVKPYSCPHCDMKFRQSGTLVTHLLMHTNERPFKCDLCESGFRQRALLKKHVASVHGSIMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01395957;
90% Identity: iTF_00311461;
80% Identity: iTF_00311461;