Cgro019945.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cheilosia grossa
Gene Symbol
grau
Assembly
GCA_963082955.1
Location
OY720148.1:41239674-41251067[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 34 0.16 16 6.6 0.8 2 23 225 247 224 247 0.96
2 34 0.1 10 7.2 1.8 6 23 256 273 256 273 0.99
3 34 8.8e-05 0.0086 16.9 2.3 1 23 279 302 279 302 0.98
4 34 5.1e-05 0.005 17.6 4.5 1 23 309 331 309 331 0.98
5 34 0.00094 0.093 13.6 0.2 3 23 338 359 336 359 0.96
6 34 0.0017 0.16 12.8 0.3 2 23 368 390 367 390 0.96
7 34 0.0011 0.11 13.3 1.0 1 23 397 420 397 420 0.94
8 34 0.28 28 5.8 2.3 1 16 426 441 426 442 0.90
9 34 0.15 15 6.7 0.2 2 23 609 631 608 631 0.96
10 34 0.037 3.7 8.6 0.3 6 23 640 657 640 657 0.98
11 34 0.017 1.6 9.7 0.6 1 23 663 685 663 685 0.98
12 34 9.3e-05 0.0091 16.8 1.7 1 23 694 716 694 716 0.91
13 34 0.23 23 6.1 2.6 3 23 723 744 721 744 0.95
14 34 0.069 6.8 7.7 2.6 3 23 754 774 752 775 0.93
15 34 5.8e-05 0.0057 17.4 0.8 1 23 782 805 782 805 0.96
16 34 0.019 1.9 9.5 0.3 1 17 811 827 811 827 0.91
17 34 1.4 1.3e+02 3.7 0.1 2 23 1076 1098 1075 1098 0.94
18 34 0.042 4.1 8.4 0.6 6 23 1107 1124 1107 1124 0.99
19 34 0.00032 0.032 15.1 0.3 1 23 1130 1152 1130 1152 0.99
20 34 1.2e-05 0.0011 19.6 0.8 1 23 1160 1182 1160 1182 0.99
21 34 0.00011 0.011 16.5 0.3 2 23 1189 1211 1188 1211 0.95
22 34 2.6e-06 0.00026 21.6 0.5 3 23 1219 1239 1218 1239 0.96
23 34 0.0011 0.11 13.4 0.5 2 23 1248 1270 1247 1270 0.96
24 34 0.00078 0.077 13.9 0.0 1 23 1277 1300 1277 1300 0.94
25 34 0.01 0.98 10.4 0.3 1 16 1306 1321 1306 1322 0.87
26 34 0.098 9.7 7.3 0.8 2 23 1765 1787 1764 1787 0.96
27 34 3.1e-05 0.003 18.3 1.6 1 23 1819 1841 1819 1841 0.99
28 34 0.026 2.6 9.1 5.3 1 23 1849 1871 1849 1871 0.99
29 34 0.00012 0.011 16.5 0.2 1 23 1879 1902 1879 1902 0.96
30 34 0.0024 0.24 12.3 0.2 3 23 1910 1930 1909 1930 0.96
31 34 7.4e-05 0.0073 17.1 0.7 2 23 1939 1961 1938 1961 0.97
32 34 0.00023 0.023 15.5 0.1 1 23 1968 1991 1968 1991 0.94
33 34 1.4e-06 0.00014 22.5 0.9 1 23 1997 2019 1997 2019 0.98
34 34 5e-05 0.0049 17.6 5.0 1 23 2025 2048 2025 2048 0.98

Sequence Information

Coding Sequence
ATGCTTTGCATGCTGTGCCTAACGGCATCGGATAAAAAACTGAATATATTTGATGAAGAAGGAATCCGGCTCAACATCAGCACTATTGTCACTAAACACTTCTGGCTGCAGCCAAGTATAGAAGAGTTCAATAAAAGCACTATCTGCTGTTCCTGCTGGCAGGCATTATGCTCATTCCACGAGTTCTACCAAAAAGTGGTGAAAGCCCATGATAAGTTTTCAAACGCAGTATTTCCAATTGACTACGATCTGtcgaaaaacaattattttgatacCAGTTCTGACTTGTGTGCTGCAGATATCAAAGTGGAGTCGTGTGGGGAACCTAAGGTTGATCTTACAAAAGTTGAATTTCAACTATTTATCACTGAAGGGAGTATAGAAAAAGAAGCTCAAATAAAGTCTGGCTCAGAATCGGATATGCCTTTACGAAAATTGAGTGCACTTCAAAAGCCAACAAAGAGAAGGGAACCCGTGTCGGACACTGATGATTCCACtaatgaaaattataataatgaaggtGATACCGACGAAGACGAAGAAAATGATACCGACTATAAAGTACCTGAAAACAAGGAAACAGATAACAATGCCACCGCCAAGAGAGAGTATAATAAGCACCGAATTCCCTGCAAACAATTTGATGAGATTATCAAACAGAATATGAAGCTGTCGTGTAACGTTTGTCACATTCCCTTGGAAAGTTTTTTCACTCTCAAGGAACACTATAGATCTGCTCACAATGAAACCGGCTACGTAACCTGTTGTGAGAAGAAATTCGACAGCCGTCACGCCCTGGTTCATCATATTCTTATGCACAAAGATCCAGAGATATTCAAATGTATGAAATGCGGTCGCGTCCTGGCAGACCACAGGGGCTTGAAGCGGCACATGAAAACGACACATGTAAATGAGGATCGTATCCATCAGTGTCAGAAGTGTAAAAAGGGTTTTCGGCGGAAAGAACTGCTAGAGAAGCATGGAAAAACACATGTGAGACCTGAAGTTATATGCGAGCAGTGTGGTAAGGTAGTACGCGGCAAGCAATATCTTAAACAACATCAGCTGCGGGAGCATTCTGGAATACCGAAACAACGTCAACAGTGCCCTAAGTGTGGCGTTTATCTTGCGGATAATTCAACTCTATCAACTCATATGAAGTATCAGCATCCAATTGTTAAAGTTGTACACGAGTGTCATATTTGTGGGAAAATATCAGCCACTGGTTACGGCCTAAAGCGTCACATAGAATACATGCACACACGGGGACGGCCGCATAAGTGTACATTGTGCGAAAAGGCTTTCAAGACGCTCAAGTGCCTGCGGCCAAATGTTGACGATCCCAACTCGAAAGCAATCTGTCGTTCTTGTTGGAGTACTTTATACTCATTCCACAAATTCTACCAAAGAGTGCAGGAAGCTCACGTTAAGTTGACCAGCGAAGATGATTCATCTGCAAATGAATTTTACCCGTATCCTGAGCGCACAGACATTAAACTTGAGACCGATGATGAACCCGAAACGGATATGGCAAATTTCAATGCAGAATGTACTGTGAAACGAATCGGAAGTACATCGTACTCTAGCTCTGACTCTGAACTTCCTCTAGCAAAATTAAGTAAACTCAGACAAAAGAGGAAAAACGACGAGGCAGTTAAGGCCTTTTACAACAAAGGAACTGGCAATAATTGTGAATACAGGCCATCTAAAGCGAAGCGGAAAATCCAACAAAATTCCAAGATTAGCCAGCACACTCCGAATATATACAGTCAAACTTTATCCCGTCAGGACTTCGATGACGTTATCGAAGAAACTATGAAACTTTCCTGTGAAATTTGTCAAATTCCACTGTCCACGTTCTTTGTGCTCAAGCAGCATTATCGCTCTGTTCACAATAAAGCTGGCCAAGTCACCTGTTGTGACAAAAAGTTCGAGAGTCGCTATAAACTAGTCACACACATTTTGTTGCACAAAAACCCCGAGTACTTCAAATGCCAACTTTGCAACAAAGTCATGGCCAACCGGAAGATTTTGAATAATCATATGAACGTCCACGCAGGCGATGGTGAATCAGGTGCATATGATTGCAATAAGTGCCAAAAGAGTTTCTCACGAAAGGGGAAGCTTGATCGACATTTGCCGACACATGACACAGTTGGACAAATTTGTGAACTTTGCGGTATATTGTGCCGTGACAGAAACTCTCTCCGGCTACATCAGCACATAAAGCATAACGATGAGCCACGACCACGTATTAATTGTAAAATATGCGGATTGGATTTCGCGTCTAGAGCAAATGTTAAATTCCACATGAAGCATCATCATCCAGAATCTGTGGCAACGCACAGGTGTACTATTTGCGGAAAGATTTCGTCTAATGCTAACGGGCTTAAACGACATATTATGTACATGCACAAGTTTGAACGTCGTCACAAGTGTACCATGTGCGAGAAGGCGTTTAAAACGCAGCAAGGGCTTAGGCCAAGTGAAAACGATGTAAATTCAAATGTTATATGTCCTTCCTGTTGGGAGAAATTGGAGTCCTTTCATAAATTTTATGTGCGAGTTGAAGATGCCCATGTTCGATTACAAAACACCAAACCCATTGACGAGGATGACTTGAAACTGGAAAGGGAAATCGCAGAAGCGCTTCGAGCTGCAAATGCTGAGCACTTTCATGAGATATTACCCATACCGGAGGTACTGCAAGCAGACGTAAAACTAGAAGTTAAAGAAGATACCGACGCAGCCGTGCCACCGACCATTCATCCAGTTGATAGTGAAAAAGATGTTGCATCTCAAATCGGTTCTACTTCTGAAAGAAGGAACTCTACAGATTCTGCAAACTCAGTAGAGAGTGAAACTCCACCCGCGTGCTCTACAAGAAGTCGTACTTCTGTTGAAAAGCCTTACGCCGAAAGCGACTCGTCCAGTGACAATAAAATTGACAACGATGATACAACTGAAATGCAGACCACATCATCAGACTGGCAGGATCTAGACTCAGACATCGACGACGATAATGATGACAGTGACTATGACGACATTAGCACAACGAcaacgaaatcaaaaaaaaagaaggcgcCTCGGAAAACAACGACAAAACGTAAGTGTAAGAAAAACGAAGACGAACCACAAAAGAAGAAGCGTACATCTGAGCGGGTAACCAAGAAAATGGAACGCATGAAAGAGTACGACGAAATAATTGCCAAAAGCATGAAGCTATCGTGTGATATCTGTGCGGAAGCATTCGCAAACTTTGCCATTATGAAGCGCCACTTTCGGTCTGTTCACAAGGAATGCGGCTATATTGCTTGCTGTGGCAAAAAGTTTCGTAAACGCGGTGTTCTCGTCGACCATATTTGTACCCATCAAAATCCCGAGTACTTCAAGTGTGAGAAATGTGGGAGGATTCTAGCCAGTCGTAAAGGTCTCGATAGTCACATGTTAACCCATGACACTGAAAAGCAGCGAATCTATCAGTGTGATCAGTGCCCAATGAGTTTCTATACAAAGCCGCTGTTGTCACGTCATTTGCAAACGCATCTTTCCGAACGCAATATAAAGTGCCCCGAATGCGAAAAGCGCTTCTCGACACAAGACATCTTACGCACACACATAAACAATGTTCACAATGCAGCGTACACCAGAATTTGTGATCAGTGTGGAAAGTCGTTCCGTCGGCCGGACGCCTTCCGCAGGCATCAATTGGAACACGATGGCGTAACACGGCCACTTGTTCCGTGTGAAAAATGCAGCGTGAGACTGACCAGCAAATATGGCCTGAAGCGGCACATGCAATCGATGCATCCCGAGACGGATATGAAACATGTGTGCGACGATTGCGGGAAGATCGCACCCAGTGCGGCGGCCTTGCAGCGTCACATATCGTACATGCACAAAATGGAACGCAAATACAAGTGCCCCATGTGCGATAAGGCATTCAAGAAGACCGGCGGACTTAAGCCGAATCCAAATGATGGTAATACAAATGTTATCTGCCCGTCCTGTTGGAGTACGTTGAGTTCATTTCACAACTTTTATCTAAAAGTCGAAGAAGCATATGAGAGTCTGGCAGAGGCTAATGTCATAGCAGCAATGCAGCCGAAATTGGAACAAGAAATGGACGAAGATATAGAAATTATTCCAAAGACCGAGATAAAGATTGAGGCGGAAGAAGTTTTCGAACAGACAATGCCAATGCTGATGCCAGAAACTGCTCCACCCGATGCATATTTAAGGAAAATCTTCGGTGATGATGCACCATCTACCAGTTGTATAGGAAGCCGTATTTACTCTGCCGAAAGCAATGTTTGCGTCTTTAAGACGGAGAGTAACAATGGAAACTTGTCGACAGACTGGCAGAATCAGAACTCGGATAATGATTATAACCAGTTGGAAGAGGATTTCGATGATAGTGGCTTGGAAAACAGCTCATCAAAACAAAAGATACCGagcagaagaaaagaaaaaccttgTGACGACAGAAACACAAAGCAGCGAACACCAAGGAGTACAAAAATGAATGAAAGCGATGAACTTATTTCAAATACCCCAAATGAAAATGACGAAGATGCACGATTTATTTGCACCTCTTGTTGGAGTGCATTGGATTCGTTTCACAAATTCTACGTAAAAGTTGAAGAGGCCCATATTACGTTGGTAAAAGCGAATAGCAATGTACAAGACGCTTTGAAACAGGAGAATGAACAAATTGCCATTCAGGCGGAAGATCAATATGTCGAAAAGCTCGTTCCCAGTACGAATGCGGAATATTTGAATGCAGACGTAAAGGAGGAGGTTAAGGAAGATGCAGACGCCAACTCACCGCAAAGCGAGTCGCTTCCCGAAAATGAGTCAAATACCGCTGTCTCAAAGACGAAATTAGCGCCAGCGTCAACTCATTCAAGCGACTCGGAGGACTCTGAATCGGAAATTCCGCTTGCCAGCTTAGCCAAGACACGGTCAAAGATGAAAGTCAAAACAAAAGCAGAATCTTCGGACAACGACGATGTGGCCTCGGTGGCCGACTGGCAAGACCATCACGACGTTGACgaagacgatgatgacgatgataacGAAGACGACGAGGAGGAGGATATTGAGAGTGAATTTGAAGTAAAGAAAGAGTTGCCAAAACAAACAGTCATAACAAAAACAGGTAAGAAACGGGGTCGACCATGTAAAAATGCCCCCAAAGATTCGACTCCTAAAAAAACTACAGAAGAACAAATCAAGAAGCGAGAACTCTCACAGGAATACGATGATATAATCATGAAGAACATGAAGTTAACTTGCAACATTTGTCTTTTACCGCTGGCAAActttttctctttaaaaaagcacTACCGGTCCAAGCACAATGAACGAGGGTTCGCCTCCTGCTGTGGCAAGAAATTCCTGAAACGTGGTATTCTGGTTGACCACATATACACTCATCTAAACCCCGAACACTTTAAGTGCGACAAATGTGATAAAGTTCTGGCCGACCGTCGATGTCTCGAGGTGCATATGAACACGCACGTGACCGAAAAACAGCGCATCTATCAGTGCGACCAATGCTGTAAGAGTTTCTTCAAGAAACCACTGCTCACGCGTCATCTTTACACTCACATTCCCGAGGAGGATCGCAAATTCCCCTGCGAGGAATGCAATAAATTCTTTCCATCGGGCTATACTCTGCGAGCGCACATCAACAACGTGCACCAAAATGTGTATGCGAAAATCTGCGATCAGTGCGGCAAATCGGTACGCGGACGGGAGGCATTCCAACGGCATTTGTTGGAGCACGCCGGTGTGTCATTACCCAGTGTGCAGTGCGACAAGTGTGGGGCGAAATTAAAGAACAAATACGGCCTTAAGAGGCACATGAACTCGATGCATGCTGAATCGAGTGTGCCTCATGTGTGCAATATCTGTGGCAAGGTGGCGCCCAATCCAGCAGCACTACAGCGTCACTATTCGTATGTGCATAAATGCGAGCGAAAACACAAGTGTCCCATGTGCGATAAGGCCTTTAAAAAGGCCGGTGGGCTCAAGgAGCACATGTCAACCCATACCGGAGAAGTGCTTTACACGTGTCCCCATTGCCCGAAAACGTTCAACTCCAATGCCAACATGCATTCGCATCGAAAGAAAATGCATCGAAAGGAATGGGAGGAGAACAGACGGCATCCGCACATGGGAGCCGTGGCAAACGCCGAATAG
Protein Sequence
MLCMLCLTASDKKLNIFDEEGIRLNISTIVTKHFWLQPSIEEFNKSTICCSCWQALCSFHEFYQKVVKAHDKFSNAVFPIDYDLSKNNYFDTSSDLCAADIKVESCGEPKVDLTKVEFQLFITEGSIEKEAQIKSGSESDMPLRKLSALQKPTKRREPVSDTDDSTNENYNNEGDTDEDEENDTDYKVPENKETDNNATAKREYNKHRIPCKQFDEIIKQNMKLSCNVCHIPLESFFTLKEHYRSAHNETGYVTCCEKKFDSRHALVHHILMHKDPEIFKCMKCGRVLADHRGLKRHMKTTHVNEDRIHQCQKCKKGFRRKELLEKHGKTHVRPEVICEQCGKVVRGKQYLKQHQLREHSGIPKQRQQCPKCGVYLADNSTLSTHMKYQHPIVKVVHECHICGKISATGYGLKRHIEYMHTRGRPHKCTLCEKAFKTLKCLRPNVDDPNSKAICRSCWSTLYSFHKFYQRVQEAHVKLTSEDDSSANEFYPYPERTDIKLETDDEPETDMANFNAECTVKRIGSTSYSSSDSELPLAKLSKLRQKRKNDEAVKAFYNKGTGNNCEYRPSKAKRKIQQNSKISQHTPNIYSQTLSRQDFDDVIEETMKLSCEICQIPLSTFFVLKQHYRSVHNKAGQVTCCDKKFESRYKLVTHILLHKNPEYFKCQLCNKVMANRKILNNHMNVHAGDGESGAYDCNKCQKSFSRKGKLDRHLPTHDTVGQICELCGILCRDRNSLRLHQHIKHNDEPRPRINCKICGLDFASRANVKFHMKHHHPESVATHRCTICGKISSNANGLKRHIMYMHKFERRHKCTMCEKAFKTQQGLRPSENDVNSNVICPSCWEKLESFHKFYVRVEDAHVRLQNTKPIDEDDLKLEREIAEALRAANAEHFHEILPIPEVLQADVKLEVKEDTDAAVPPTIHPVDSEKDVASQIGSTSERRNSTDSANSVESETPPACSTRSRTSVEKPYAESDSSSDNKIDNDDTTEMQTTSSDWQDLDSDIDDDNDDSDYDDISTTTTKSKKKKAPRKTTTKRKCKKNEDEPQKKKRTSERVTKKMERMKEYDEIIAKSMKLSCDICAEAFANFAIMKRHFRSVHKECGYIACCGKKFRKRGVLVDHICTHQNPEYFKCEKCGRILASRKGLDSHMLTHDTEKQRIYQCDQCPMSFYTKPLLSRHLQTHLSERNIKCPECEKRFSTQDILRTHINNVHNAAYTRICDQCGKSFRRPDAFRRHQLEHDGVTRPLVPCEKCSVRLTSKYGLKRHMQSMHPETDMKHVCDDCGKIAPSAAALQRHISYMHKMERKYKCPMCDKAFKKTGGLKPNPNDGNTNVICPSCWSTLSSFHNFYLKVEEAYESLAEANVIAAMQPKLEQEMDEDIEIIPKTEIKIEAEEVFEQTMPMLMPETAPPDAYLRKIFGDDAPSTSCIGSRIYSAESNVCVFKTESNNGNLSTDWQNQNSDNDYNQLEEDFDDSGLENSSSKQKIPSRRKEKPCDDRNTKQRTPRSTKMNESDELISNTPNENDEDARFICTSCWSALDSFHKFYVKVEEAHITLVKANSNVQDALKQENEQIAIQAEDQYVEKLVPSTNAEYLNADVKEEVKEDADANSPQSESLPENESNTAVSKTKLAPASTHSSDSEDSESEIPLASLAKTRSKMKVKTKAESSDNDDVASVADWQDHHDVDEDDDDDDNEDDEEEDIESEFEVKKELPKQTVITKTGKKRGRPCKNAPKDSTPKKTTEEQIKKRELSQEYDDIIMKNMKLTCNICLLPLANFFSLKKHYRSKHNERGFASCCGKKFLKRGILVDHIYTHLNPEHFKCDKCDKVLADRRCLEVHMNTHVTEKQRIYQCDQCCKSFFKKPLLTRHLYTHIPEEDRKFPCEECNKFFPSGYTLRAHINNVHQNVYAKICDQCGKSVRGREAFQRHLLEHAGVSLPSVQCDKCGAKLKNKYGLKRHMNSMHAESSVPHVCNICGKVAPNPAALQRHYSYVHKCERKHKCPMCDKAFKKAGGLKEHMSTHTGEVLYTCPHCPKTFNSNANMHSHRKKMHRKEWEENRRHPHMGAVANAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-