Cgro001665.1
Basic Information
- Insect
- Cheilosia grossa
- Gene Symbol
- cheC
- Assembly
- GCA_963082955.1
- Location
- OY720144.1:28727959-28728306[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-11 1.2e-08 34.9 0.0 3 42 11 50 9 52 0.92
Sequence Information
- Coding Sequence
- ATGAAACGAACCTACCAGACATATAGTGAATCCTCACTAGCTAATGCCTTAAAGGCTATTCGTGAGGATGGTTTGAGCTTTCGAGTAGCAAGTAGGGAGTTTGGTGTGCCGATTGCCACACTTCATGATAGAATCAAGGGCAAAATTTCAGATGGGCTTAAGCGAATGGGTCCTTCTACAGTGCTTACTGAGATTGAGGAGCGCAAGGTCGTAGATTGGTTGATTAATATTGCCAGATGCGGCTTTccccaaaaaataaatgagcTTTTAGACGTCGTTCAAAAAATCGTTAAGGATGAAAAGCGGATAACTCCCTTTAAAGATGATAGACCCGACAAAAAGTGGTAA
- Protein Sequence
- MKRTYQTYSESSLANALKAIREDGLSFRVASREFGVPIATLHDRIKGKISDGLKRMGPSTVLTEIEERKVVDWLINIARCGFPQKINELLDVVQKIVKDEKRITPFKDDRPDKKW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00694516;
- 90% Identity
- -
- 80% Identity
- -