Cnem010709.1
Basic Information
- Insect
- Chalcosyrphus nemorum
- Gene Symbol
- GATA6
- Assembly
- GCA_949716465.1
- Location
- OX454333.1:77399481-77407648[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2 8.7e+03 -3.4 0.9 9 26 424 439 417 440 0.49 2 2 2.2e-17 8.7e-14 51.0 5.1 1 34 472 504 472 506 0.97
Sequence Information
- Coding Sequence
- ATGATTTATCTTTTGCGTGATGAGATACCACAGGAATTCCTTTTGATGGAAGGTCagcaacatcagcagcagcagcagcaacagcagcaaccaaTAGATCTAATAACTGAGATCAAAACAGAGCCTAGTAGTGAGCAAGTACCATCGCGGACACCAACAATTGaggagcaacaacaacagcaacatcaacaggaacagcagcagcaacaggcACAGCAACaagcacagcaacagcagcagcatttacaacatcaacaacaacttcagcaagaacatcaacagcaacaacaacaacgaaaagagAATTCATTGAATGCATCTAGACTCTTGCGTGGTGAACTAATCGATCAATCATCAGTACCATCGTCAGTGCCAATTGTACGCACCCAACAGAGACGTATTCTGACAACAGCTGGAACCTTGAGAGAAGTCAACGAGACTGTTCGAGAAAACGACGGTGATTCAGACTACAACAGCCATCAGCACTCGCCATCGGAATACGTTCAAATGACTCCACGAACCGAGGAACCCACAACGGTCTACACCTATGAGACCGCTCCAACCACTTTGATTGCATGCGATAATCCATCGATTAAAATCGAATCGCTTGAAAAggaccaacagcagcagcaacaacaacaacagttgcAACAGCAAACCGAACAGCCTTCATCAGGAGCGACTGCTGTCTTCCCTGTAACAACAGTAGTCTCTGCAGCAGCACTTCAAAATCACCATACTCAACATCCGCAACGTTACGAAGATGAACGTTTCGCTGCGGCTATTGAAAACGGTGACCAGATTATATACTACGATCCAAATGCCCTGAATGGCGCCACTGTTGTCGATGCACATAACGAGGCTAAAACATTTACCAATTTGGGTCCAGCTGCTGGAAGTCTGCCAGCAGCCGGCAGTGAATACTCAGTCTCGAGCAATTACAGCCAGAATAGTCCATATTCGGGTTTGGGACAAACCTACAACATGACCAACACCAATCCGCTCATGTACAAAACTGATCCAACGCTAAATACTATGCGACCAAATAGCCAATTCCCCATAGCGGTGTATGACAATCCCAATGTATCCGAATCCTATTGGCCCGGTACCGCTGCCATTGAGTTCGCCAATATTAACACCTACAATCAGGTGATAACCGATGAATACGGTTCACCGAATGGCACCTCATGGGCAACATCAGTTGGAACTACCACAACCACGACGTCTTTTGATCCAACTGGAGCTGATGTAAAGTGTCAGTACTGTGGATCTCAGCTCCTGCGAAAGGATAACAATGAATACATATGCGTAACGTGCTCTTCGTCGCGTATGACGCATGTAACGCGCCTGCCACCACGTCAGACTAAGCCAAAGGCTTCGACGGCAAATAATAACCGAAGGAATGGAGTTAGCTGTGCGAATTGCTTCACAACATCGACAACGTTGTGGCGTCGGAATAACGAGAGTCAACCGGTTTGCAATGCCTGTGGATTGTACTTTAAGCTGCATAACATGAATCGACCGTTGACGATGAAAAAGGAGGGAATCCAGAAGAGGAAACGTAAACCGAAGCTGGCGAATGGAGCACCGATGAGGAATACCCTACCAAGCATAATGGTACCTTCACACCATCCAATGTATCCATCGGACGTACGCAACATTGGCCTTACAATGGTTTCAGCGCACGAGCTGCATGACATGTCTAGCCCAACGAGTAATGGCTCCAATCGCATAAGCATCAGTCACAGTGATGTCGGTTCAATTAATTCAAGTCGTCATCACCTGATATCAGATGTACCAACATCAGCTGGAGAGAATCATACCGCGCAATACAATTGCTGTGAACCACCATCGCAGAGTCAATCGCCACATTTGCCAAATACCAGCACTTTAAATAGACAAATTACCCAAACAGTTCCACCAATAGATGGCGGCCGATCAGTGAATGGCGAAATTACAACCAGCGTCATTACCAGTACTGGCATTCCTGAAAGGTCctcgaataattaa
- Protein Sequence
- MIYLLRDEIPQEFLLMEGQQHQQQQQQQQQPIDLITEIKTEPSSEQVPSRTPTIEEQQQQQHQQEQQQQQAQQQAQQQQQHLQHQQQLQQEHQQQQQQRKENSLNASRLLRGELIDQSSVPSSVPIVRTQQRRILTTAGTLREVNETVRENDGDSDYNSHQHSPSEYVQMTPRTEEPTTVYTYETAPTTLIACDNPSIKIESLEKDQQQQQQQQQLQQQTEQPSSGATAVFPVTTVVSAAALQNHHTQHPQRYEDERFAAAIENGDQIIYYDPNALNGATVVDAHNEAKTFTNLGPAAGSLPAAGSEYSVSSNYSQNSPYSGLGQTYNMTNTNPLMYKTDPTLNTMRPNSQFPIAVYDNPNVSESYWPGTAAIEFANINTYNQVITDEYGSPNGTSWATSVGTTTTTTSFDPTGADVKCQYCGSQLLRKDNNEYICVTCSSSRMTHVTRLPPRQTKPKASTANNNRRNGVSCANCFTTSTTLWRRNNESQPVCNACGLYFKLHNMNRPLTMKKEGIQKRKRKPKLANGAPMRNTLPSIMVPSHHPMYPSDVRNIGLTMVSAHELHDMSSPTSNGSNRISISHSDVGSINSSRHHLISDVPTSAGENHTAQYNCCEPPSQSQSPHLPNTSTLNRQITQTVPPIDGGRSVNGEITTSVITSTGIPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00241218; iTF_01542599; iTF_01223880; iTF_01541823;
- 90% Identity
- -
- 80% Identity
- -