Cnem008498.1
Basic Information
- Insect
- Chalcosyrphus nemorum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949716465.1
- Location
- OX454333.1:43245649-43277168[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-14 2.6e-11 43.2 0.1 1 44 338 382 338 383 0.92 2 2 1.7e-18 2e-15 56.4 0.0 1 43 830 873 830 875 0.95
Sequence Information
- Coding Sequence
- ATGCCTCTGCCAGCATACCCTCTGTTTGAGGGCTTAGAACGGGTTGCTGAGGAGTTGATGGGACGCAGGAAATGGAAGCAATATCAAGAAGCTTTAACGCGATCCCAATTAAGTGCAGATATCACAAATCTAGATCAAATCGATATTTCAAatcAGAAATACGAACCCGAACAAAAACTGGAGAAGGCCAAGGAAAATTCACATCAgccgcagcaacagcaaccgTTCGAAAACGACGTTCCAAAAATCAAAACCGAAGTTATCGACGTGAACGAAAGAACTTCTATTTCGCCGCACATAAAAAAAGaaaacttcgAAAACAATTCAGTAGTAACGGAGGGAAACATAAAACTTAATAATAATACAACTACATCACATAGCattcataataataatagtaaaaagGATAACGAGGAGTTGCTGCCGCCACCCACCAGTCCGACACCACCACCATCAATACCCATCGATTGGACACCGaatgaaaagtgtaatttttgtGTTGACGGTAAACTGCTCACAGTGAACGAAAAGGGTGAATTAGTGGCCGAGTCAAGCCCGGCTTTGTCCGAGGCAGACCTCGCCAATAGAccACCAGGAGATTCGGACAGTGATTCTAGCGATAGTCTGGTACCGAATGCTAGAATCAATGCGAGTAAAATACTAACACCACGTCTTAGAGAATCAGTTCCACCGAATATGACCTCATTGGAGTCgatggcagcacaatggacagCAATTCAATCATTACCGCAAGGATTAGGGCAATTGTATCCAAgCATATTGTTCAATTTAACTCAACAAGTGAACTCGGCCACACCAACTACCTCAGAGACATCGGCCGCCGCTGTAAGTCCTTCACTAAAGGGTTCTCCCAGTCCCAGTGATTTAACGGGTGAACAGCCATTAGATCTTAGTTCAAAACCATCACCAAATTCCTCAATTGTTGGAGATGTAAGACATGTGCACCGaGCGAAACCCCGTGTAACACCATGCACTGGTCGCCGAACCTACACAGAGGAAGAACTTAACAATGCCCTGCAGGACATCATGAGTGGCAGGCTGGGTACACGCCGGGCAGCCGTTCAATATAACATTCCACGTTCCACGTTACGTAATAAGGTGTATAAAATCTCATCGGGAGCAAAACGTGAAACACCCACATCACTGCATCATCCAGCCAGCCTTGAGGACTTGGCAGATGTTGATGATGACAAACAGGATCTATCAGCCGACGAGGAGGATAGCAGTGGTGATAAGTATCTTGGCAGTTCCTTAGCGTCACACCAAGGCGGAGATGATCTTGCCAGTCGTTTTGCTGATGCGAATCTTGCAGCGAGCATTCAAAAGATGTGCGCCGAACAGAATAGTTTATcgcatcagcagcaacagcaccaaCAGCCGCTAAGTGATATTCAAATTCATAATAAACCGACAACATCACTAGATTCACAGCCGAAGCGGAAAGCTTCAACGCCACAACCTCCACCGCCACAAACATCACCACACCAACAGCATAACTTCTTGCAGAATGCGGTACAAAATGCTCTGTTGCAGCAGTCCATACTCTCGGGTGGTTTACATCCAAACTTTGAAGAGACCGTTATTCGAATGTTCAACGCCTTGCTAATGAAGCAGGATGCGAATTTATTAAATCCTCAATTGATGATGCAACTGCAGCAGCCACAACGGTCGCCGCAGTCATCTCAACAGCATCTATATCCGAGTAATGCATCAACGGCAGCATCCTTTCAAAATCGCCAACCAAAGTCTGAAACACCAGAAACAGCATCCTCAGTGGACCTGAATGAGACGCTAGGAGATGATCCATCAGTTATTCTAAAAATTCCGTCCTACAAACCGGTAGCTGGATCCTCAACTTCATCAGCATcttctgcagcagcagcagtagcagcagcggcGTTATGCAACAACAAGAATGGTGAGAGTCTACCATCGAGTTCGCCAAAAATTCCAACAGCGTCCGCTTTGTTGGGTGCCAATACCTCAGCGCAACAACAATtacatcaccatcaccaccacctgCATCAACATCACAATACTTCGGCGCCGACGGGCAATAATATACCCGGCATATCGCCTCCTTTGATACGCCACGCCAGCGGAGAGTCCCAGTCACCACCAACTCTATCGCTTCGCGACGTCATCGCGAACAGTATAAGTCGAACCTTTAGTCAGCAGGCGAATAAAGACACCACCAGTCCGAGTCCTGCTCACTCATCATCATCGGCAATGGATCACCACAATGACCAGTACAAACGGCCCAGCATATCAGTGATTAAGAATATCGGCGGTACCGATACTTCACGCTTTGCCACCGCGCCAAATCTGCTCGGTGGCCATCACAACTCCAATCATCATCACCAGCAgcaccatcaccatcagcatcaCAGCCAAAACGCGGTGAATAACAATAATTTAGCCGGTGGCAAAGGCACTCGGCCGAAGCGTGGCAAATATCGGAACTACGATCGGGATAGTCTCGTCGAAGCGGTTAAGGCGGTGCAACGTGGCGAAATGTCTGTACATCGTGCCGGCAGTTACTATGGCGTGCCTCACTCAACACTCGAGTATAAGGTAAAAGAGCGCCACCTGATGAGGCCTCGTAAGCGTGAACCCAAGCCACAGCCACCGCTGGACGATCGAACGGGCGGGAGTAGCTCATCGGCTGGAAACACCTCGAGCTCTGCGGCAAACACCTCAAAAAACTCAAACATTCCAGGTTTATCGGCTGTAAATAGTTTAGATAAATTGAATAAGAACAGCGGCACTGCGGGCAACCAAAAACAGTCGGCCGCTGGCAAGAGTAACCCACCATTCCCTACGACGTCACCAAATGGCATGAAAATATCGCCGGTGTTATTCGACCCGAGTGTAGCCGCCCATCTGCAGTATTCGCCGCACCTCTTCTGGCCCGGTAGCTTTGGACAGATTCCAATGGATCTACATCCACGATCACAAGCAGCTGCCGCGGCTGCTGCTGTAGCCGCTGCAGCGGGCAGTGGTGCTGGAAATCCTTCATTTGCCGCTGCTAATGCCGAACTATTCAAATCCCAAATGTTGCAGCGATTCCACGAAGATCGAGGAGGTCCTCCCAACGCCATCAGTAGTCCACCAGCGCCCCCAGCACTTAGCAATTCAACCACTGGCAGTAACAACAACACGAACAGCAAAAGTGTCCGTGAAATCGCGGAGAACCTCTACGACACAACTGGAGCGAATGGCTCATTCTTGGACGGTATTATCCGCAAAACTCTCGACCGAAAGAGTTCCGATTTATCGCAAGGCGCCTTACTAGACCAGCTGGTTAAGAATAGCAAACCACCGCCTCCGCGTCTAATGATGAACAATGATCGCACGACGGGAGACCTCCTTAAACTTAAACGTTCCGGCAGTCCAATGCCGTATCACCCTGCGATGGAAATCAAACGTGAACGCGCCAGTCCAACATCAGATTCATCAAATAGTGATTCGGAGCAAAACCACAGGCGCGACTCTGATCAGGAACTACAAGGATCCCATAATGCGCTGCATCATGCTCTATTGGGCACCAATAATGACTTGAATGGTGCCCAACATGCGCTCGCTTCAATGTCCAGCGGCCAATTGATGGGCTCGGAAAATAATCTGACCGCTTCATCGTCCTCCGCGGTGGCGACCAGTATTTTGCACGAGAAATTAGGGCAAATCAAGTCCGAAACAGAAGATAGTTTATAG
- Protein Sequence
- MPLPAYPLFEGLERVAEELMGRRKWKQYQEALTRSQLSADITNLDQIDISNQKYEPEQKLEKAKENSHQPQQQQPFENDVPKIKTEVIDVNERTSISPHIKKENFENNSVVTEGNIKLNNNTTTSHSIHNNNSKKDNEELLPPPTSPTPPPSIPIDWTPNEKCNFCVDGKLLTVNEKGELVAESSPALSEADLANRPPGDSDSDSSDSLVPNARINASKILTPRLRESVPPNMTSLESMAAQWTAIQSLPQGLGQLYPSILFNLTQQVNSATPTTSETSAAAVSPSLKGSPSPSDLTGEQPLDLSSKPSPNSSIVGDVRHVHRAKPRVTPCTGRRTYTEEELNNALQDIMSGRLGTRRAAVQYNIPRSTLRNKVYKISSGAKRETPTSLHHPASLEDLADVDDDKQDLSADEEDSSGDKYLGSSLASHQGGDDLASRFADANLAASIQKMCAEQNSLSHQQQQHQQPLSDIQIHNKPTTSLDSQPKRKASTPQPPPPQTSPHQQHNFLQNAVQNALLQQSILSGGLHPNFEETVIRMFNALLMKQDANLLNPQLMMQLQQPQRSPQSSQQHLYPSNASTAASFQNRQPKSETPETASSVDLNETLGDDPSVILKIPSYKPVAGSSTSSASSAAAAVAAAALCNNKNGESLPSSSPKIPTASALLGANTSAQQQLHHHHHHLHQHHNTSAPTGNNIPGISPPLIRHASGESQSPPTLSLRDVIANSISRTFSQQANKDTTSPSPAHSSSSAMDHHNDQYKRPSISVIKNIGGTDTSRFATAPNLLGGHHNSNHHHQQHHHHQHHSQNAVNNNNLAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPPLDDRTGGSSSSAGNTSSSAANTSKNSNIPGLSAVNSLDKLNKNSGTAGNQKQSAAGKSNPPFPTTSPNGMKISPVLFDPSVAAHLQYSPHLFWPGSFGQIPMDLHPRSQAAAAAAAVAAAAGSGAGNPSFAAANAELFKSQMLQRFHEDRGGPPNAISSPPAPPALSNSTTGSNNNTNSKSVREIAENLYDTTGANGSFLDGIIRKTLDRKSSDLSQGALLDQLVKNSKPPPPRLMMNNDRTTGDLLKLKRSGSPMPYHPAMEIKRERASPTSDSSNSDSEQNHRRDSDQELQGSHNALHHALLGTNNDLNGAQHALASMSSGQLMGSENNLTASSSSAVATSILHEKLGQIKSETEDSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223304;
- 90% Identity
- -
- 80% Identity
- -