Cnem015705.1
Basic Information
- Insect
- Chalcosyrphus nemorum
- Gene Symbol
- kn
- Assembly
- GCA_949716465.1
- Location
- OX454335.1:14808686-14826031[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.3e-51 3.1e-47 161.3 0.0 10 135 108 220 100 229 0.92
Sequence Information
- Coding Sequence
- ATGACAACTCGGCAGCCACTATTGCTGGTCTCTGCTGGCTTTGCGCTGCCTGTCTGCTTTGGCGTACTGCTGCATCGCATCTCCGGTGTCGGGTTCGGGAATACGGATACAGCACAGTGGATGGTCGTCGCCGTTGTCTACACGTTGGTGCTGCGGTCCGACGAACCGGTGCCGGGCTTCAGCTCGGCTTCACCATGGCCGACATTGGAATTGGAGTGGGGGCGAAAATTGTACCCAACAACAGGTCCTCGGTCGGCCAGCGGTTTGATGTTCGGCTTACCACCAACTGGAGCCGACTTAAATCAGCCTCGAGGACCAATGACATCACTCAAGGAAGAACCTCTCGGTGCCAGGGCTTGGATGCAACCAGTCGATCAGACCAACCTTGGTATTGGTCGCGCCCACTTTGAAAAACAGCCCCCAAGTAACCTGCGTAAATCTAACTTTTTCCACTTTGTGATTGCGCTATACGATCGAGCTGGTCAACCGATTGAAATCGAACGAACGGCTTTCATCGGTTTCATCGAAAAGGATTCAGAGTCGGATACCACAAAGACAAACAATGGCATCCAATATCGATTACAACTTTTATACGCAAACGGTGCCCGCCAGGAGCAGGACATTTTCGTACGACTCATCGATTCGGTGACTAAGCAGGTAAGCTATTCTTTGCCAAATCCAGAAGAAGAACAGAGAGACACGAAAAAATGGGCGTGA
- Protein Sequence
- MTTRQPLLLVSAGFALPVCFGVLLHRISGVGFGNTDTAQWMVVAVVYTLVLRSDEPVPGFSSASPWPTLELEWGRKLYPTTGPRSASGLMFGLPPTGADLNQPRGPMTSLKEEPLGARAWMQPVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDTTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQVSYSLPNPEEEQRDTKKWA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00315725;
- 90% Identity
- iTF_00315725;
- 80% Identity
- -