Cnem015707.2
Basic Information
- Insect
- Chalcosyrphus nemorum
- Gene Symbol
- kn
- Assembly
- GCA_949716465.1
- Location
- OX454335.1:14868040-14873469[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-119 2e-115 386.5 0.0 205 385 1 210 1 212 0.99 2 2 4.1e-11 1.3e-07 30.4 12.8 422 512 213 305 210 325 0.77
Sequence Information
- Coding Sequence
- ATGAGGCGATTTCAGgtTGTGATATCAACACAGGTGACCGTTGATGGGCCACTCTTAGCCATTTCCGATAACATGTTTGTGCATAATAATTCTAAGCATGGTCGTCGCGCTAAACGGATGGACGCCACGGAAGGTACAGGAAATTCTCCCCTGTCCATTTCGGGTCACCCCCTTGCGCCTGACAGTACCTATGATGGACTCTATCCACCCTTACCAGTAGCCACCCCCTGCATAAAGGCGATATCACCGAGCGAAGGTTGGACCACTGGTGGGGCTACTGTCATCATTGTCGGTGACAATTTCTTTGACGGCCTTCAAGTTGTTTTCGGCACGATGTTGGTTTGGAGTGAGTTGATTACATCACATGCCATACGCGTTCAGACACCTCCGCGACATATACCCGGTGTGGTGGAGGTAACACTCTCGTACAAGAGCAAACAGTTCTGTAAAGGTTCTCCTGGACGATTTGTCTATGTTTcaGCCCTTAATGAGCCGACAATAGACTACGGCTTCCAGCGACTGCAAAAGTTAATCCCCCGCCATCCAGGTGACCcggaaaaattacaaaaagagaTCATACTTAAACGTGCAGCCGATTTGGTTGAAGCTCTATACTCAATGCCACGATCTCCCGGAGGAACAACTGGATTCAATTCATATGCTGGTCAATTGGCCGTCAGTGTTCAGGATGGAACCGGTCAGTGGACCGAGGATGAATACCAGCGAGCACAAAGTAGTAGTGTGAGCCCACGCGGTGGCTATTGTAGCAGTGCATCTACGCCGCATTCGTCGGGTGGATCTTATGGGGCAACTGCGAACGGCTATGGACCGGCACCGAACATGGGAGCTTTGTCATCGTCGCCGGGCAGTGTATTTAATTCGACATCAACTAGTGCCTTTTCGCCATTAATCTCAACAGTGTCGTCCCCATGGCATCAAGCACTCGTTcaacatcatcaccatcatcactcGCATCCGCATCCACACCATCACCATTCGCATCATCCACATCAGCCGTGGCATAATCCGACAACGGTATCTGCGACAGCAGCtgtttaa
- Protein Sequence
- MRRFQVVISTQVTVDGPLLAISDNMFVHNNSKHGRRAKRMDATEGTGNSPLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGTTGFNSYAGQLAVSVQDGTGQWTEDEYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATANGYGPAPNMGALSSSPGSVFNSTSTSAFSPLISTVSSPWHQALVQHHHHHHSHPHPHHHHSHHPHQPWHNPTTVSATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01116233;
- 90% Identity
- iTF_00893648;
- 80% Identity
- iTF_00315724;