Cnem009319.1
Basic Information
- Insect
- Chalcosyrphus nemorum
- Gene Symbol
- cnc
- Assembly
- GCA_949716465.1
- Location
- OX454333.1:54556561-54560199[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-16 3.3e-13 49.6 6.1 3 56 270 323 268 332 0.87
Sequence Information
- Coding Sequence
- ATGCCGATGAAACGATCCCCTGCAACTTTACCGATGGATAACGGTCGCTCATTGACAGTTGGAATAcaagaaaaatcaattaatgTTAATGGTATTAGCGATCGATTAGAACTGTCATGTGACAGTGCTGTCAGTTCTTTAAGTTCTGAAAGAGTTCCGTCAACATCGGACGGTGAATGGGGCGAAGGAAGCGACTCAGGCCAGGACTATCATCAAGGAAATTACTATGGGCCTTACGACTATAGCTCTAACAATCGCAGCTACACTCCACGACAAAGACCGGTTGCTCAGAAAAAATACCACATGTTTGGGAAAAGGTATTTTCAAGAGCAAATGCACGAAAACACAATTGTCCAATCCACAATTCATTTCTTACAATCAAGTAATTCTATTGGGGAATGCGATGGCATCGATAATATAATTGAAAATGCGTCATACGATGATTGTGCTGAAGAAATTATTCCCCTTTCGAATGTGAAAAACCCATGTAAATTAActcatttaaatgttaaatcagAAAGAGATAAATTTGTTAGTAATATTACACATCCTCAAATTACACATGAAAATTCTATACGGCACAATCACACCTACGCTATATTAAACAATACGACCATAAGTTCTCGCCTCCCTCAAGAAAACACTCAATGTAAGGATTTTAATCCCGATGGGCATTTGACACGTGATGAGAAACGAGCACGTAATATGAACGTGCCTATTTCAGTCCCTGATATAATAAATCTACCTATGGATGAGTTTAACGAACGCATATCTAAGTACGATCTTAGTGAAAATCAATTATCCCTTATACGAGATataagaagaagaggaaaaaacaaagTAGCAGCCCAAAACTGCCGTAAAAGGAAACTTGATCAAATTCTATCTCTTGAAGACGAAGTTAAAGAGGTTCGCCGCCGAAAAGAAAAGTTGCATAGCGACAGAGATTTTAtagctgcagaaaaaaaaagaatcgcaaACAAATTTGCAACTTTACATCAACATATATTTCAAGTAAGTTAA
- Protein Sequence
- MPMKRSPATLPMDNGRSLTVGIQEKSINVNGISDRLELSCDSAVSSLSSERVPSTSDGEWGEGSDSGQDYHQGNYYGPYDYSSNNRSYTPRQRPVAQKKYHMFGKRYFQEQMHENTIVQSTIHFLQSSNSIGECDGIDNIIENASYDDCAEEIIPLSNVKNPCKLTHLNVKSERDKFVSNITHPQITHENSIRHNHTYAILNNTTISSRLPQENTQCKDFNPDGHLTRDEKRARNMNVPISVPDIINLPMDEFNERISKYDLSENQLSLIRDIRRRGKNKVAAQNCRKRKLDQILSLEDEVKEVRRRKEKLHSDRDFIAAEKKRIANKFATLHQHIFQVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -