Csis023192.1
Basic Information
- Insect
- Chalcis sispes
- Gene Symbol
- pnr
- Assembly
- GCA_949987625.1
- Location
- OX465096.1:61943875-61972386[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.3 2.1e+04 -3.5 0.0 15 26 50 61 48 62 0.77 2 3 1.1 5.5e+03 -1.7 0.1 2 12 271 286 271 291 0.74 3 3 1.4e-16 7.2e-13 49.2 5.1 1 35 490 523 490 524 0.98
Sequence Information
- Coding Sequence
- ATGTTCGATGTACCGCCCAAGTTCTACGAGCTCTGCCGCCTTTGTCTGTCGACGGACGGTGTCAAGCTGTCCATATTCGAGGAGGAGGGCACCCAACGTAACTTTGCCGACAAGATACTCACCTGTCTCTCCATCACGGTGAAAGATGGAGACTCGATGCCGCCGATCATCTGCCATCGGTGCGTCTACAAGCTGGACGTCCTGCACAACTTTCGGGAGGTCTCCCGGAAGTCCGACGTTTTACTCAAACAGTACCTCGATTACGCCAAACAATTGTCCTCCCAAGAGGATATGGAGAAGTCACTCAGCACTGCCAAGTCGGACAGCGAGCTGAGCTCGGTGCAGGCGTTCATTCAGCTGAGCAAGACTCTCTTCAACGACGAGCCAAATTCACCGGCCAGTATAAATCAAAATGTCCTATCCGCGCAGATGCGCACTCATCACCTCGAGCATCATCATCAACAGCACAATGAGCAACAACATCAGCAACAACAACGGCAAtcccagcagcagcagcaccagcagcagcCGTTGGACGAGCACGACGCGACGACGGGCACGGGAATGGAAGACGACACCTGCTCCAACAGCTCGGATCCCGACAGGCTCGAGATCGAGGACCGCGACGAGGAGGCCAGCGAGGACGACAACGCCGCCGAGGAAAACGGCTACGACATGAGCATAAATCCTTCGAAGAGGCCGAGAACGGAGAAAGCGTCGAGCGACGAGATGCAAGTCAAAATAAAAAGGGAAGTTAGCAGCAGTCCGCAGAACGCCGTAAGTCCTATCAACAGGATGGATACGCCAGAGAGCAACTGCTCGGATACTCAGGTTGATCAGGAGACTACAAAACTTTGGCAAGCACTCGCTAGcaACCGTAACCTTGAGATAACGCGAACAAACGGCGACAAGCCAAACAACGGTTTCAGCGGCGAGGCAACGAATCTACTTCGCTCGCTCATAAACAATCGACACATCGGAATAACGACGGTGGAAGCGGCGAtggcagcggcagcggcggctAACGCCAGTCCGGACGGTCGAAATTTGCCCCAGATACGATTTTACCGGGACACCACTCAAGGTGGTGTCACAACGCCGGTTACCCAAGCCACTTCGCCGGCGGACTCTTCCGTCCTCGGCAACCGCACCAATATCGCCGCGCGCATCGACCCCAAGAATGCATCGATGGACAGTAATCCGTCGAGTCCGGCGAGCGGTGGCACAGGAGGCGGCCGAAAAGAAACTAAAGGAAGACGAAAACAAAGTTATCCGAGCAAAGCACCGACTAGTCCCGTTGATTATCAACATCATGAGTCTATGGAGGAACAAGCTCAAGATTTTACGGCTTGgtctaacaaaattaaaatcaaggaAGAAATAAAGCAAGAACAGCCGGGAATAATGATCGGCGGTGGCAATGCCGCCAACAATGCTAACAATATGGCCAAGAAGGTGGACATGTCGTGTACGAATTGCGgcacgatgacgacgacgatctGGAGGCGAAACATGAAGGGCGAAATGGTTTGCAACGCCTGCGGTTTATACTATAAACTACACGGGGTTAATCGGCCGGTTACTATGCGCCGGGACACGATACACACGAGACGGCGTAGGCCCAAAGGCGAAAAGCCCACCAGGCATCGAAAGAAAGCAGACAGCGGAGCATTAACGGCACATCAGCATCAGCAACACCAGCAACAGACTCAGGAACATATGGACGCGGAAAGTGCGGACATGTTAGCTGCCTTACGACGTCAGATACAGCCGCACCTAATGATGGCCGCTTTGACGACGCCGCCGCAACCAGCTCGAGCTGCTATCCCACCGGTAAGAGGTACACCTCTTACCGGTACGCCGCTTAATTTCTCCATTCCCCTCACTAACTTTATGATGCACCATGTAAAGACAGAGAATGAACGCCACGATGAGGCCGACGAAATGGACGACGAGGGCGACGAAGAAAACGTCTCGGATGTGCCGCTGAACCTCGTTTCTACTTCTTTAGCTGAAGAGGCTCACTGA
- Protein Sequence
- MFDVPPKFYELCRLCLSTDGVKLSIFEEEGTQRNFADKILTCLSITVKDGDSMPPIICHRCVYKLDVLHNFREVSRKSDVLLKQYLDYAKQLSSQEDMEKSLSTAKSDSELSSVQAFIQLSKTLFNDEPNSPASINQNVLSAQMRTHHLEHHHQQHNEQQHQQQQRQSQQQQHQQQPLDEHDATTGTGMEDDTCSNSSDPDRLEIEDRDEEASEDDNAAEENGYDMSINPSKRPRTEKASSDEMQVKIKREVSSSPQNAVSPINRMDTPESNCSDTQVDQETTKLWQALASNRNLEITRTNGDKPNNGFSGEATNLLRSLINNRHIGITTVEAAMAAAAAANASPDGRNLPQIRFYRDTTQGGVTTPVTQATSPADSSVLGNRTNIAARIDPKNASMDSNPSSPASGGTGGGRKETKGRRKQSYPSKAPTSPVDYQHHESMEEQAQDFTAWSNKIKIKEEIKQEQPGIMIGGGNAANNANNMAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKADSGALTAHQHQQHQQQTQEHMDAESADMLAALRRQIQPHLMMAALTTPPQPARAAIPPVRGTPLTGTPLNFSIPLTNFMMHHVKTENERHDEADEMDDEGDEENVSDVPLNLVSTSLAEEAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -