Basic Information

Gene Symbol
ZFX
Assembly
GCA_949987625.1
Location
OX465094.1:74524141-74529587[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.9 3.5e+02 3.2 0.1 3 23 30 50 29 50 0.94
2 15 0.74 1.4e+02 4.5 2.0 1 20 1002 1021 1002 1025 0.76
3 15 0.25 46 6.0 1.9 2 23 1111 1133 1110 1133 0.95
4 15 0.0012 0.22 13.3 0.3 2 23 1146 1167 1146 1167 0.98
5 15 2e-05 0.0038 18.8 2.3 2 23 1170 1191 1169 1191 0.97
6 15 0.0038 0.71 11.7 0.3 1 23 1197 1219 1197 1219 0.95
7 15 2.8e-05 0.0053 18.4 4.5 2 23 1226 1247 1225 1248 0.95
8 15 0.13 23 6.9 3.7 5 23 1261 1279 1260 1279 0.97
9 15 2.5e-05 0.0048 18.5 1.5 3 23 1286 1307 1285 1307 0.97
10 15 0.012 2.2 10.2 0.3 2 23 1323 1343 1322 1343 0.97
11 15 7.7e-05 0.014 17.0 0.7 1 20 1349 1368 1349 1371 0.92
12 15 9.5e-05 0.018 16.7 2.7 1 23 1379 1401 1379 1401 0.99
13 15 0.0027 0.5 12.2 3.2 1 23 1407 1429 1407 1429 0.97
14 15 4.8e-06 0.00091 20.8 3.9 1 23 1435 1457 1435 1457 0.99
15 15 0.00035 0.065 15.0 7.2 1 23 1463 1485 1463 1486 0.96

Sequence Information

Coding Sequence
ATGGATCTCAGCTCGGCAGTAAGTGCAATGTCAGCCGCAGCACCTAATAGTAGCGGCAGTAGCGCCGGTGGCGGTGGGGCAGTGGCTTGTCCGGTCTGCACGCTGTATCTGCGCGAGGGCATCAGCCTGCAGAAACATTTGGACACACATCCCAAAGAGCAGGTGATCGAGGCGCTCATCCGAGCGAGTAGCGGCGTCGCCGGCGGTGCCTCGGCGCTCCTTAGCCAAACTTGTGTGCAGCAGCAACCACAGCAACCGCAGCAGTCACAGACTCCAGTGCCGACACCGACGCCTACGCCTACACCGGCGTTGCCTTTACCTACCTCGAGTCCAGGCTCAAATGTCCAGTCAACCGCGTCACCGAGTGCACATGTTCCTCATGCCCAGTCGCCTTATCCGATTGGGCCTATATTCGAGTGCCCGCCGATCAACGCTATGATACCGCCGCCCCAATTTACTTCTTTTAGCTATCAGCAATTTGTTAATAATGgtaCTATGATGATACCTGCACAGTATGCGATGGCTCAGCCACAACCTCATCAGACCAGTCAGATGATGCAAATGCTATACAGTCCCTATGGCATGTATCATCAACAACAAATTCCTACAGTTCAGATGATCTCGGCACCTCCAATGATGcccacaacaacaacaacgttGCCAACAACAGTACCGGCGGTTACGACACGTATGAGGCCTGCTACTAGTACGAGCAACGTCACACTCACAGCTGTCAACGAAACTGCAACGACATCATCGCACTCGAGAGCGACAAATTGTTTGCAGTCGCATCAAacacaacagcagcaacaagaACAGCAACAACAGACACAGCAGCAAGAACAACAGGAAATGGTCGTTGAGCCGCCAAAACAACAAATTGATCAAGACATTATATCTGAACCAGATCGTATATTGCCAGATTTGGAGATGCCCGTATCACCTGAACCATCGCCAGTAGAAACAGAAGATGAACAAAATAATACACATATAGAGCATAGGGATCAACAGACTCAAAACAGTTGTTTACAAGAGGAAGAACGGCACGTTGTTGAACAATATCAAAGAAAGGATCCACCATCTGCAATCAGTAATTCCTGCGAAGAAAATACTGAGGACGATAAGACTGAAAGGATCTTACCCGATATTGAAGACAATGAAGAAATTGAATCTTTAATAGTAAGGAAAATAGACAGGGTAGAAAGtgacaaaaatattgaaacagaAGAATCTGTTGAACATATGGAAGTTTTAGTTGAAGAAGAGATCGCGGACaatgaaaaagtagaaaatgttGAATGTAGCAAAGTAGGAATTTGCAAAGAATCGGAAGATAAATCCGAAAATAATGTACAAATTGTAGCAGAAAATGTGCAACCTCAAGAAGGTGTAGTCGTTAATGTAACTGAAAGTTCTAGCACCAATAAAGTGGAAATCGAGCAATTGAATCGATTACTTATAAGTATGAAAtcagaatttaaaaatgtagaagattctaataaaaatgatcAGGAAAGTAGTGATAGATCTCAGgaagaaattcaaaatatcTTATTGGACGATCCTCTCGAAAAAACTTCTGAAGAAGATGAAAATACTGATGTGTCATACCACAAAGTCAATCCTGAATCGattgaatgtaaaattattgttgCACATGAAGATACAGATGTATCATCTGTAGCTTCGGAAGATTTCACACACTGTGACCAAAAAACTATTTCATCTACCTATCACTACAAATACTCGCAGTCTGTTCCTTCTTCACCGAtcaGCTTCGAAGCTACGTCGTTGCAAGACTATCTCAAAGATAATTACAATGATGAAGACATGGAACTAGAGGAGCCTCAACATCATACCTTTGTGAAACAAAATCATGAAATCGTGGATCGTGCCAGATGTCATACTCCTTTGTCTGTAAGTGCAAGCAGCAGTTCTGTTCTAAAAGCCCGCCACAGTAAAGTGCAAAATTCTCCCGTATCTATGCCCTCTTCGTCTTCTTACTCTCgtatagaagaagaagaagaagatgacgaggaagaagaagacgaagattCAGATGCAGAAAGCTGCGGTAGTGGAAATGAAAAAGAtgacgaagacgaagaagaagaagaagaagaagaagaagaccaAATTTTGCTTAACTCTTCGACGCAAGAAATGGCTAGAAACGATgaacagaaaaaagaaatagtatATGTGGAAGATTGTAAAGCTATGTTGACCGCCGATATTTTacaacagcagcaacatcaACAACAATTACAACAAGAATTAGCCTCAGACTTCCGATCGCAAAACTCAATAAATGATCATTATTCAGCTGTTTTGTTCCCATTAGATCATCATCCCATAACTCCACAGCAACAGCAACCTGTCGTAGCTATACATCACGAAGCTTATCCATTATCAAACAGTGAAACTTCACAAAATCTCTTGAATATATCTGATTGTGTGGATCCAACTACTAGTACAGATTCGAAGAGCTATCTCAGTTCGAACAAATCTTTGGCTCAAAAACCAACAACGGAACTTTTGAATATCAGCGAGGACGCACACGCGGGGCCCATGAACGTTTTTGAATTCGATGGACTCCAGATATTAGTTCCAAGTACGTTTATTAGTGAATCATCGCAAAAAGCCGTAAGTGGAACGAGTCAACAATCAATGTCTAGTAGTGAAAACGGCGCAGGTAACGACGAAGAAGTTAAAAGTGTAAACATGAGAGCTGATGAAACTATGCCACCTAGGGGGGAATTGTCAGAGCAAGAAAGCAACGGTTGCACCGAGCAATCGGCTTGGCAGTTGTACATGGGACAAGAATCTTCACGCATGTCCACATCTTACGATTTAATGGCGCGAGAAAGCTGGGAAGAATCCGAAGGTTCTGATCATGACGATAATAACGGTGGTCCTTTGCTGGACAGCCGTTCTCTTGCAACCCACTTCACATCAAGCCTCTTTCTCGATCGCGACCGTAAAACTCCTACTCGTCGTATTTTCAAGTGTTCTCACTGCCCAGAAGTATTCGAATGCCCCAAAGAACGCCGTGTACACAGTGCAATGGTTCACAAGGAAGCTGGCCCTTCCAGCTGTAACAATGATAATATGAATCAAAGCGAATTCAAAGATATAAAACTTCTGGAGGGCCGTTCTAATGTCTTTGAGGAAATTTTCGTACCTGGCGGTGTACATCTCCAACAAACATATCAACATCATCAGCAGCAACCGTTACTTCATCAACTTCAGCCACCGCCTCAACATTCGAGTTCGGCTAAGGCTGAAAGTGAAGTTAAAATTGACTCTCTCCTTCCAACAAGCGAAGTCACATGCAGTCTGTGCACTCAACGCTTTAGTTGTGAGAAATCTCTGCAAATACATCAAGCCCGTGTGCATATTGCCGAACCAACAAAGCGGATTCGCGAAATCGCCAAGTGTCTAATCTGCAATGAAGAGTTTAGCACTGTCGTCAATTTCAATCTGCATCTTAAAATTCATCCTTTGGAATGTGGTCAATGCGGCAAGTACTTTTACCGTAAGCAGAATTTCAAACTTCATATGAAGCGCCATCTTGGAATAAAACCTTTTCCTTGCACTATATGCGGCAAAGCATTTCTTACGAAGCAGAAACTGGATGAGCACACAAATGGTCATACCGGTAATGCACCTGTAAAATGTAACTTGTGCAACGAAACATTTAGACGATATTCGAATCTTACTCAACACAAAAATCGTCATCATTTaaacattaagaaaaaattaaaagattacatATGCCACTGCGGGGAAGTTTTCCATACAAAGAAAAAACTTGCTTGGCACAAGGAAACGCACGATGAAAAACCCAAAGCGTGTACCTACTGCAACGAGCGTTTTATTCACATGGCAAGTCTTACCCGACACATGCGCCGAGCTCACAACCGAAGATTCGTTCCCGATGCgcaaagagagagtgagaacgtCGAGTGTCCAATTtgtaaatgcatttatttaaggTCTTCCTTGGCAGTGCATATGCGCGTTCATAACGGAGAAAGACCTTATGAGTGCCAGGTCTGCTCTAAGGCTTTTAGTACCAAATGGAATTTGCAGCTGCATAAATGGACTCACGCTGCTCGGAGCACGAAACCGTTCAAGTGCAATCAGTGCAGCGCAGCATTCTATAGACACAGTGATTACACGGCTCATATGAATTCTCATAGAAACGTCAGGCCGTACACCTGTAACTATTGTGGAGCGCAGTTCATCAGGAAGTATAATTGTTTGCGGCATGTTAAAGAACATGAAGAGAACAAAGCGTACACGTGTGACGTATGTAACAAGACTTTCCATAGATCGTATTATTTGAAAGAGCACTTAAGAGTGCATTCAGGAGCTAGACCTTACACTTGTCATATATGTGGCAAATCGAGCAGCACAAAATCTAATCATAACAAGCACGTCAGGATTCATCACGCGCGAGAACCTGTAAATTCAGAGAATTAA
Protein Sequence
MDLSSAVSAMSAAAPNSSGSSAGGGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSGVAGGASALLSQTCVQQQPQQPQQSQTPVPTPTPTPTPALPLPTSSPGSNVQSTASPSAHVPHAQSPYPIGPIFECPPINAMIPPPQFTSFSYQQFVNNGTMMIPAQYAMAQPQPHQTSQMMQMLYSPYGMYHQQQIPTVQMISAPPMMPTTTTTLPTTVPAVTTRMRPATSTSNVTLTAVNETATTSSHSRATNCLQSHQTQQQQQEQQQQTQQQEQQEMVVEPPKQQIDQDIISEPDRILPDLEMPVSPEPSPVETEDEQNNTHIEHRDQQTQNSCLQEEERHVVEQYQRKDPPSAISNSCEENTEDDKTERILPDIEDNEEIESLIVRKIDRVESDKNIETEESVEHMEVLVEEEIADNEKVENVECSKVGICKESEDKSENNVQIVAENVQPQEGVVVNVTESSSTNKVEIEQLNRLLISMKSEFKNVEDSNKNDQESSDRSQEEIQNILLDDPLEKTSEEDENTDVSYHKVNPESIECKIIVAHEDTDVSSVASEDFTHCDQKTISSTYHYKYSQSVPSSPISFEATSLQDYLKDNYNDEDMELEEPQHHTFVKQNHEIVDRARCHTPLSVSASSSSVLKARHSKVQNSPVSMPSSSSYSRIEEEEEDDEEEEDEDSDAESCGSGNEKDDEDEEEEEEEEEDQILLNSSTQEMARNDEQKKEIVYVEDCKAMLTADILQQQQHQQQLQQELASDFRSQNSINDHYSAVLFPLDHHPITPQQQQPVVAIHHEAYPLSNSETSQNLLNISDCVDPTTSTDSKSYLSSNKSLAQKPTTELLNISEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSGTSQQSMSSSENGAGNDEEVKSVNMRADETMPPRGELSEQESNGCTEQSAWQLYMGQESSRMSTSYDLMARESWEESEGSDHDDNNGGPLLDSRSLATHFTSSLFLDRDRKTPTRRIFKCSHCPEVFECPKERRVHSAMVHKEAGPSSCNNDNMNQSEFKDIKLLEGRSNVFEEIFVPGGVHLQQTYQHHQQQPLLHQLQPPPQHSSSAKAESEVKIDSLLPTSEVTCSLCTQRFSCEKSLQIHQARVHIAEPTKRIREIAKCLICNEEFSTVVNFNLHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTICGKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNSEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-