Basic Information

Insect: Chalcis sispes
Gene Symbol: -
Assembly: GCA_949987625.1
Location: OX465096.1:12208371-12213829[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.1 19 7.2 5.0 1 23 294 316 294 316 0.98

2 19 5.8e-05 0.011 17.4 0.7 1 23 365 387 365 387 0.98

3 19 0.014 2.6 9.9 1.0 1 20 442 461 442 463 0.94

4 19 0.0039 0.74 11.7 0.9 2 23 504 525 503 525 0.97

5 19 0.00059 0.11 14.2 0.3 1 23 564 586 564 586 0.97

6 19 0.00047 0.087 14.6 0.1 1 23 592 614 592 614 0.97

7 19 2.4e-06 0.00045 21.8 2.4 3 23 660 681 659 681 0.96

8 19 4.6e-05 0.0086 17.7 0.8 2 23 689 711 688 711 0.96

9 19 0.00014 0.026 16.2 1.3 2 19 740 757 739 762 0.89

10 19 0.00018 0.033 15.9 0.4 1 23 791 813 791 813 0.93

11 19 0.036 6.8 8.6 0.1 2 20 872 890 871 890 0.95

12 19 0.00026 0.048 15.4 0.3 2 23 909 930 908 930 0.97

13 19 0.006 1.1 11.1 5.6 1 23 959 981 959 981 0.97

14 19 0.44 82 5.2 4.7 1 21 1000 1020 1000 1024 0.86

15 19 0.037 6.8 8.6 1.3 2 23 1086 1108 1085 1108 0.94

16 19 0.0027 0.51 12.2 0.7 2 20 1136 1154 1135 1158 0.88

17 19 0.00065 0.12 14.1 0.1 1 23 1165 1189 1165 1189 0.96

18 19 0.015 2.9 9.8 4.6 1 23 1194 1217 1194 1217 0.97

19 19 0.0075 1.4 10.8 0.3 2 23 1248 1270 1247 1270 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.1	19	7.2	5.0	1	23	294	316	294	316	0.98
2	19	5.8e-05	0.011	17.4	0.7	1	23	365	387	365	387	0.98
3	19	0.014	2.6	9.9	1.0	1	20	442	461	442	463	0.94
4	19	0.0039	0.74	11.7	0.9	2	23	504	525	503	525	0.97
5	19	0.00059	0.11	14.2	0.3	1	23	564	586	564	586	0.97
6	19	0.00047	0.087	14.6	0.1	1	23	592	614	592	614	0.97
7	19	2.4e-06	0.00045	21.8	2.4	3	23	660	681	659	681	0.96
8	19	4.6e-05	0.0086	17.7	0.8	2	23	689	711	688	711	0.96
9	19	0.00014	0.026	16.2	1.3	2	19	740	757	739	762	0.89
10	19	0.00018	0.033	15.9	0.4	1	23	791	813	791	813	0.93
11	19	0.036	6.8	8.6	0.1	2	20	872	890	871	890	0.95
12	19	0.00026	0.048	15.4	0.3	2	23	909	930	908	930	0.97
13	19	0.006	1.1	11.1	5.6	1	23	959	981	959	981	0.97
14	19	0.44	82	5.2	4.7	1	21	1000	1020	1000	1024	0.86
15	19	0.037	6.8	8.6	1.3	2	23	1086	1108	1085	1108	0.94
16	19	0.0027	0.51	12.2	0.7	2	20	1136	1154	1135	1158	0.88
17	19	0.00065	0.12	14.1	0.1	1	23	1165	1189	1165	1189	0.96
18	19	0.015	2.9	9.8	4.6	1	23	1194	1217	1194	1217	0.97
19	19	0.0075	1.4	10.8	0.3	2	23	1248	1270	1247	1270	0.95

Sequence Information

Coding Sequence: ATGGATGACGTTGTGGAGATTAGCGGGCTAGATAATGCCTGTAGATTATGTCTTACAACTGAACAAACGAGGTCTTCAATTTTTGGCGTACCCCATGTATCCGTGCCCTTCGTTGAAAAAATACGAGCCTGCTTGTCAATACAGgtTTCAGTCAATGATAAAGTATCAACATTAGTATGTAcaagttgtataaaaaatataaatcaatggcATACTTACAAAGATGTATGCTTAAAATCACAAGAAAAACTTCAACAATGGTTATCAAAGCAAAGTACAATTATTCAAccTGCAGTAACTGTAAAAGAAGAACCAATGGATGAAGAATTTTCAAATGATATGCAAGTGACAGTAAATGATTCTACTAATGTCAGTCATGCTATTACCAATTTTATTAGTatgaataatattgaaaataatttaacatcatTTACAAACACATCTTCTCAAATTATGATGGAatcacaaaaagaaaatgaaaaaatagataaagacTCTTTTCCTtcgattcaaattaaaaatgaacctTTGGATACAGAAGATGAAGATGATTTTAATATAGATGTTGAATCAGTAAATAGTGGTGAACTTTTAATCAATCCAATGGCTGTAGCAGTTACAAATACTTCAGTTAATGATAGGACTATGGAAGCTGATTCAACCCAAAAATTTGGTACAAAGAGATTaggatataaaaaaagaatgcgacAAGGACCTCGTACACATTACAGACAACACATGTCTAGATATCAcgACAATGTAGATTATGGCGCTGATACTCAGAATGAAACTGATCCAGAAGAtgcagaatttgaaaaaatgataaaaactgATCCTTTAACACCTGttcaaaaaaatcttattagtcagttaaaaactttttcttgcTATACCTGCAAACAAGCCTTTTTTGATCGAAAACACACCTTGAATCATATTAGACAACATATGCCTGATTTGCGACCATTTACATGTATTGCCTGCTTAACTGAATTTTCTGATAGATCTATGTATAAAATACATTGTGGTGCTTCTTTTGAATGCGCAATGAAAATTGCTCTAGTGGTTCCAAAAGTTGGTTTTGAAAAGTACTTCACTTGTAACATGTGTTTGCGATCATTCAGTAATCGAAAAGAGCTCTTAATTCATTTAGCCATGCATGCAGATAAACAATATAAGCAACTTAATCAGCCAGTAATATCTCCACCAAAACTAAAACCAATAAATTCATCTACACCAGCTTCTAAAGTTGACTCTGCATCTTCTCATAAATCTGTTTTTAATCAATCTGGACCATATGTTAATGGTGATCCGGCTCATAATCATATGTGTGATTTATGCGGTATGATTTATAAGCATAAACCCAATATGTTTAAGCATCGTGATCTGTGTTCTACCTTACCAGAAAACATTAGAACTTCATATAAATGCATTCATTGCAATATGACATaccttgtttataaaaaattttacaatcatgTTTTACACTACCataaaaaacatgaaattaCTTGTTACACATGTCAAGAAAAGTTTGCTACACCTGATGACTATCTTAGTCATCATGAAACACACAGAGTTCAAACCAACCAAGATGAAATACAAGACAATCAaccttataataattattcaatgaaaGTGGATCCGATGAACTCTTCAACTAATCCAGTGGATGTAACTGAAAAGCCATTCAATTGTGCATTGTGTGGTGAAGATTTTACCACTAAACTTGAGCTTACTGAGCATCGTAACCTCCACCTCAAAGTAAAAATCTACTCTTGTGTTATTTGTCGCAGTATGTTTAGTAGCTCTGGAGCTTTGGAAATCCATATGAAAGATCACGGAATTGAAGATCCAAGTGAACAAAACGCTAACAGTTCCTGTCTTGAGTATGATCATAATAGTCATTCTCAAGGTTCTTCTTTAAATGAATCTTCCACATCTGCTACATCAGACACTGGTGCACATTTTAATCATTGCTATGATTGTGGCAAGAACTTCTCTAATCTTGCAAATTTGAAAAGGCACCAAAGAAATGTTCATAGCTCAATGAGACGTCGTTGGAGTTGTGATGAGTGCAGGCGACGTTTCAAATCTCTTGAAGCTTATAATAAACATATGAATACAGAACACCAGCTACAAAAAGAACAGCAACTGTATATTGAACAGccTATAGTGCAATCTCAAGTATCTTCCATTACTGGGAAGCCTCTGATGCAGTGTCCAAAATGTCCCAGGACGTTTACTTACCAGGGTAACTTGATTCAGCACTGTCAGAATGTTCACAAGGAAAATCACTTTGAACGAGCTAAAGCGGTTGCTGCTCGTCAATCAGATCCTTCCTTTCCCCGTTTTATTCCTTCTCGTGGTTTTGCTTGCGATTTGTGCGGCAAAATATTTAGGGAAAAGCAGTCACTTAAAACTCATCGAGGGTGGCATCTTCGGACTACTTACAGGCTCAAAGTGGATCAAAATGCAAGTTTAGACGAGAATATGTTGAGCGGCCCTGGCTTTACAATGAGAATAGCAAATTCGTCCGAGAAGCCAGCAAAGGCAAGAAAATCATTTCCGAATAATCCACCGCAGAAGCAGTTAAATGCCATTGCAAAGTTACAATGTCAAGTGTGTGACGATCGTTTTACTGACGTTGCTGAGTTACGAAAACATCTTTGGGACATTCATTGTGCTCGGAACAAACCAGAGAAAATTTTCACAAGCGAACTGCAATGCGAGTTATGTACTAATAAATTCTCAGATGAGGAATCCTTGGAGAACCACATGAAGTGGCATTTGCAAAATCCAATTCTTAGCAACAACAGCAATAGCAAAAGTAATGATGATGTCATTACTAGCGTTGATACGATAAAAAAGTCTTTCCATTGCGATACTTGTGGCAAGTACTACAGTAATCGTAAACTCTTCCTACGCCATAAGAAGCTTCATAAAACTGTGCCTGTTTCGACTATGATGAATTTTCAGTCACTCCAAACGAAACGGCACTTTTGTCGTGCTTGTCAGAAAAACTTTTCAACCGATGCATCGCTTAGAAGACACAAAGCTTCATCTTGCCACATGCACGCGGTACGAAGAAAGATGCATTCTCAGATGCAAGCGCCAGCGAAGAAAATTACGACTACAGCACTGGTGCACCAACCGCCTCCTGACTCCATGAGGCTGCAGACAATTAACAAAGAACCTGATGCGGATTATCAAGTAACAAGTCAAGCGTCTGAAAGCATTAAAAAGAAATCCGTTACTTGTCATACGTGCAAGACGATTTTCCCTAACATGAGCGTATTATATCGGCACAAGCAACTTGTGCATAAAGTGCCTATcggagaaagaaataaatctaATTTGAAGCAAAATAAATGCGTGCAGATTACAAGCTCCGAAGGCACGGTTTCATGCCATTTATGTGGTAAGCAGTTCCCTGGAGTGTCAAACTTGAAGATACACTTTGTTCAAAAACACAAGGTTAAAAATACAGCATATCCTTGTTCCTTGGCTGGATGTAAATTCGTATTTAGCAGTGCCGATTCATTGAAAAACCACGAAGTAACTCATACAAACTTGATATACAATTGCCATTTATGTGGTAGACACACATTCTCCAGGGTTGCAATGAAAAAACACATGTTGTCTACGCATAAGGCTATTTATCAATCTggcgtaaataaaaatactttgtgGTCTGAGATAGATTTGACAAATTATCAAGTTAAGAATTGTACTAATACCGTTTGTCCAAAATGTAAAGTTAAGTACCCAAATCTCAGAGCATTAAAAATTCACTATTTGAAGAATCACGAGAAaacataa
Protein Sequence: MDDVVEISGLDNACRLCLTTEQTRSSIFGVPHVSVPFVEKIRACLSIQVSVNDKVSTLVCTSCIKNINQWHTYKDVCLKSQEKLQQWLSKQSTIIQPAVTVKEEPMDEEFSNDMQVTVNDSTNVSHAITNFISMNNIENNLTSFTNTSSQIMMESQKENEKIDKDSFPSIQIKNEPLDTEDEDDFNIDVESVNSGELLINPMAVAVTNTSVNDRTMEADSTQKFGTKRLGYKKRMRQGPRTHYRQHMSRYHDNVDYGADTQNETDPEDAEFEKMIKTDPLTPVQKNLISQLKTFSCYTCKQAFFDRKHTLNHIRQHMPDLRPFTCIACLTEFSDRSMYKIHCGASFECAMKIALVVPKVGFEKYFTCNMCLRSFSNRKELLIHLAMHADKQYKQLNQPVISPPKLKPINSSTPASKVDSASSHKSVFNQSGPYVNGDPAHNHMCDLCGMIYKHKPNMFKHRDLCSTLPENIRTSYKCIHCNMTYLVYKKFYNHVLHYHKKHEITCYTCQEKFATPDDYLSHHETHRVQTNQDEIQDNQPYNNYSMKVDPMNSSTNPVDVTEKPFNCALCGEDFTTKLELTEHRNLHLKVKIYSCVICRSMFSSSGALEIHMKDHGIEDPSEQNANSSCLEYDHNSHSQGSSLNESSTSATSDTGAHFNHCYDCGKNFSNLANLKRHQRNVHSSMRRRWSCDECRRRFKSLEAYNKHMNTEHQLQKEQQLYIEQPIVQSQVSSITGKPLMQCPKCPRTFTYQGNLIQHCQNVHKENHFERAKAVAARQSDPSFPRFIPSRGFACDLCGKIFREKQSLKTHRGWHLRTTYRLKVDQNASLDENMLSGPGFTMRIANSSEKPAKARKSFPNNPPQKQLNAIAKLQCQVCDDRFTDVAELRKHLWDIHCARNKPEKIFTSELQCELCTNKFSDEESLENHMKWHLQNPILSNNSNSKSNDDVITSVDTIKKSFHCDTCGKYYSNRKLFLRHKKLHKTVPVSTMMNFQSLQTKRHFCRACQKNFSTDASLRRHKASSCHMHAVRRKMHSQMQAPAKKITTTALVHQPPPDSMRLQTINKEPDADYQVTSQASESIKKKSVTCHTCKTIFPNMSVLYRHKQLVHKVPIGERNKSNLKQNKCVQITSSEGTVSCHLCGKQFPGVSNLKIHFVQKHKVKNTAYPCSLAGCKFVFSSADSLKNHEVTHTNLIYNCHLCGRHTFSRVAMKKHMLSTHKAIYQSGVNKNTLWSEIDLTNYQVKNCTNTVCPKCKVKYPNLRALKIHYLKNHEKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -