Basic Information

Insect: Chalcis sispes
Gene Symbol: -
Assembly: GCA_949987625.1
Location: OX465096.1:8799749-8803314[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00027 0.05 15.3 4.0 1 23 233 255 233 255 0.98

2 11 0.025 4.6 9.1 11.8 1 23 261 283 261 283 0.95

3 11 9.7e-05 0.018 16.7 6.8 1 23 289 311 289 311 0.99

4 11 4.2e-05 0.0078 17.9 1.0 1 23 317 339 317 339 0.95

5 11 3.9e-06 0.00073 21.1 1.2 1 23 345 367 345 367 0.97

6 11 6.9e-06 0.0013 20.3 0.2 1 23 373 395 373 395 0.97

7 11 8.6e-05 0.016 16.9 1.6 1 23 400 422 400 422 0.97

8 11 3.9e-06 0.00072 21.1 0.0 1 23 428 450 428 450 0.96

9 11 0.00067 0.12 14.1 0.4 1 23 462 484 462 484 0.98

10 11 1.7e-06 0.00033 22.2 2.0 1 23 549 571 549 571 0.97

11 11 2.8e-05 0.0052 18.4 4.6 1 23 581 603 581 603 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00027	0.05	15.3	4.0	1	23	233	255	233	255	0.98
2	11	0.025	4.6	9.1	11.8	1	23	261	283	261	283	0.95
3	11	9.7e-05	0.018	16.7	6.8	1	23	289	311	289	311	0.99
4	11	4.2e-05	0.0078	17.9	1.0	1	23	317	339	317	339	0.95
5	11	3.9e-06	0.00073	21.1	1.2	1	23	345	367	345	367	0.97
6	11	6.9e-06	0.0013	20.3	0.2	1	23	373	395	373	395	0.97
7	11	8.6e-05	0.016	16.9	1.6	1	23	400	422	400	422	0.97
8	11	3.9e-06	0.00072	21.1	0.0	1	23	428	450	428	450	0.96
9	11	0.00067	0.12	14.1	0.4	1	23	462	484	462	484	0.98
10	11	1.7e-06	0.00033	22.2	2.0	1	23	549	571	549	571	0.97
11	11	2.8e-05	0.0052	18.4	4.6	1	23	581	603	581	603	0.97

Sequence Information

Coding Sequence: ATGTGCACCACACCCGGGAGTACCGGTACCGGGTTTGGCTATGCCACATGGTCATTTAGCGGACCCGGAAATGATAGCCGGGAGAACACACAGAGTGACATTACTGGTACCATCAGCTACGCAGCAGTCAACAATAATCAGGATCAAGGATCTAGTCCTAAAATACAGATTGATGTTAAACCtactaaaatacaaaatagTGTCCATAGAAGAACCATGTTTACCATGAATGAAAGCTGCCAACAAACTCCTACTACTACGCATCAGGGCCATACAACTGGAGCTCATAATCAAACAACTCATGTAACCCATGTTAGGTCAAAGAAACATCATGATGTTTTTGCACTTACATGTGACAAGGGTGGATGCAATTGTGATGCTCATCACTCTACACCACCACCTTCACTTTTTCCTAACACATTAGTTTTTGCTACAGATAAACACACCATGAGCAAGCACTTTATGACTCCCATAGGTCCTCTACAACTCACAGCTGAAGAATGCAACGAAATCCTTATGAAAAGAGCAGCAGCAGCTTCAAATCAATCCAGTTCCAATAATGTAGCCTCCAGTCAAACAGATACAACTGCTCACTTTGGCCATGTTCTCACTCATGTAAATACAACCCAAATAGATACCAAACCCAAGACGCAACAAGACATAGGATCGCAAGTTCGTGTACCTAAAGAAAGACCATATTCTTGCACAGAATGTGGAAAGTCATTTTTATTGAAGCATCATCTCACTACACATGCAAGAGTACATACAGGGGAAAGGCCTCATATTTGCGTGCATTGTGGCAAGAGTTTCGCGCACAAACATTGTCTTCATACCCACCTTCTCCTTCATAGCGCCGAAAGACCTTTTCAGTGTCGGGAATGTAAAAAGTCCTTTACATTGAAGCATCACTTGGTGACACATACTAGAGTACATACAAGAGAAAGGCCGTTTGTTTGTCCTGAATGTGGAAAAGCTTTTCCTTTAAAACGCCATTTAGTGACACACAGTAAATTCCATACAGGAGAACGACCTTTTGTTTGCGAAGAGTGCGGTGAGTCATTTGCTCAAAAGGAACACTTGACCATGCATTCGCGCTTCCATGGCAGTTTGCACCCATTTGTTTGCCCTGATTGTGGTATGAGCTTCCAGAGAAAGTTCGAACTGGTTAATCATGGTCGCTTGCATGGTAGGATACCACACTCTTGTACAGTTTGTGGGAAAGAATTCTTGCAGAAGAGAACTCTACTGGCTCACATGCGACTGCATACTGGAGAAACACCTTTTGCTTGCACAGTATGTGGAGAAGCTTTCCCGAGAAAGTCTGATTTAATAGCCCACTCCAAGATTCATAACAGTAATAATTCTGATTCAGATACAAAACCATTTACCTGTCGAGAATGCGGATTAGAATTTAATAACAGGGAAGCCCAGACTTTGCATTTAAGGTTACATTCAGCAGATAGAACACTTGTGACTGATCTTTGTGGACTTGCTGCAACATTTCAGCAAACGACTGGACATTTTCTTACTGCAAACACCTCTGCCCATCAGATGAACGGACCTCTGGGTTCGGCCACCGTGAGTCATATGCATGGTGCAACGCAGACATCACCACCAGTCGGTGCAGGCCCTAAGCCTAAACCGCATATCTGTCCAGACTGCGGCCGAGGCTTCGCTCAAAAACATGGTTTATCCCAGCATCAGCGTCGACACTCGGACGGCAGTTGTCACATCAGGTCGCACGTGTGTGATAAGTGCGGCAAAGCCTTCTTCCAGAAGAACCACTTGCTGCTTCATCAACGTCAGCACATGGATCCGCCACCGAGTATACTGCGCCAACAACAAAGACAAGCTGCTCAAGCGGCAGCTCAAGCTGCTCAGCAAGGCAACAGCAGTGGTGGAACGCAAGTTATCACGGTGGATGGGCAACAAACTTGCGTCGACACCAAGGCTATAGCACTGCAAGTTATACAACAGCAGGTGCAACAGCAAGCCGCGGCAGTCGCTGCTGCTCAACAACAAGCTCAACAGCAAGCGTCGCAGCAACAAGTATCTCAGCAACAACAAGCGCAACAACAGGCGCAACAGCAGCAGGCACAACAACAGCAAGCGGCGGCTCAGCAACAAGCAGCGGCGCAGCAGCAGGCAGCGGCACAGCAGCAAGCAGCGCAGCAGCAAGCGGCAGCTCAGCAGCAAGCCCAACAGCAGCAAgcgcaacagcagcaacaatcgcagcaacagcagcagcaagcGTGTTCCGTGGATAATAAAGCAATACAGTTAAATGTCACCATGTGA
Protein Sequence: MCTTPGSTGTGFGYATWSFSGPGNDSRENTQSDITGTISYAAVNNNQDQGSSPKIQIDVKPTKIQNSVHRRTMFTMNESCQQTPTTTHQGHTTGAHNQTTHVTHVRSKKHHDVFALTCDKGGCNCDAHHSTPPPSLFPNTLVFATDKHTMSKHFMTPIGPLQLTAEECNEILMKRAAAASNQSSSNNVASSQTDTTAHFGHVLTHVNTTQIDTKPKTQQDIGSQVRVPKERPYSCTECGKSFLLKHHLTTHARVHTGERPHICVHCGKSFAHKHCLHTHLLLHSAERPFQCRECKKSFTLKHHLVTHTRVHTRERPFVCPECGKAFPLKRHLVTHSKFHTGERPFVCEECGESFAQKEHLTMHSRFHGSLHPFVCPDCGMSFQRKFELVNHGRLHGRIPHSCTVCGKEFLQKRTLLAHMRLHTGETPFACTVCGEAFPRKSDLIAHSKIHNSNNSDSDTKPFTCRECGLEFNNREAQTLHLRLHSADRTLVTDLCGLAATFQQTTGHFLTANTSAHQMNGPLGSATVSHMHGATQTSPPVGAGPKPKPHICPDCGRGFAQKHGLSQHQRRHSDGSCHIRSHVCDKCGKAFFQKNHLLLHQRQHMDPPPSILRQQQRQAAQAAAQAAQQGNSSGGTQVITVDGQQTCVDTKAIALQVIQQQVQQQAAAVAAAQQQAQQQASQQQVSQQQQAQQQAQQQQAQQQQAAAQQQAAAQQQAAAQQQAAQQQAAAQQQAQQQQAQQQQQSQQQQQQACSVDNKAIQLNVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00144040;
90% Identity: iTF_00464131;
80% Identity: -