Csis015513.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chalcis sispes
Gene Symbol
ZNF236
Assembly
GCA_949987625.1
Location
OX465095.1:64908486-64928442[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 8.6e-05 0.016 16.9 2.2 2 23 173 194 172 194 0.96
2 26 0.00034 0.064 15.0 1.0 1 23 200 222 200 222 0.97
3 26 4.4e-06 0.00082 21.0 0.2 2 23 228 249 228 249 0.98
4 26 0.00061 0.11 14.2 0.3 2 23 256 277 255 277 0.96
5 26 0.00041 0.076 14.8 1.7 2 23 288 309 288 309 0.97
6 26 4.8e-06 0.0009 20.8 0.4 1 23 330 352 330 352 0.99
7 26 7.8e-05 0.015 17.0 0.9 1 20 358 377 358 380 0.96
8 26 0.00018 0.033 15.9 0.6 1 23 386 409 386 409 0.96
9 26 0.0042 0.78 11.6 2.1 1 23 418 441 418 441 0.97
10 26 1.3e-07 2.4e-05 25.8 1.6 1 23 536 558 536 558 0.99
11 26 0.00015 0.029 16.1 2.4 1 23 564 586 564 586 0.99
12 26 0.00038 0.07 14.9 1.1 1 23 592 614 592 614 0.98
13 26 0.0038 0.72 11.7 5.9 1 23 687 709 687 709 0.98
14 26 8e-08 1.5e-05 26.4 0.4 1 23 715 737 715 737 0.98
15 26 0.00026 0.048 15.4 4.2 1 23 743 765 743 765 0.97
16 26 7.3e-05 0.014 17.1 5.0 1 23 771 793 771 793 0.98
17 26 0.61 1.1e+02 4.8 1.8 2 23 1053 1074 1052 1074 0.88
18 26 0.032 5.9 8.8 6.2 1 23 1080 1102 1080 1102 0.98
19 26 0.00058 0.11 14.3 1.0 1 23 1108 1130 1108 1130 0.98
20 26 3.5e-08 6.6e-06 27.5 0.8 2 23 1167 1188 1167 1188 0.98
21 26 0.0013 0.25 13.1 5.1 1 23 1194 1216 1194 1216 0.99
22 26 4.5e-05 0.0085 17.8 2.5 1 23 1222 1244 1222 1244 0.98
23 26 0.016 2.9 9.8 2.8 2 23 1251 1272 1250 1272 0.96
24 26 4.5e-07 8.4e-05 24.1 0.3 2 23 1461 1482 1461 1482 0.98
25 26 2.2e-07 4.2e-05 25.0 1.7 1 23 1488 1510 1488 1510 0.98
26 26 2.3e-06 0.00044 21.8 2.1 1 23 1516 1539 1516 1539 0.96

Sequence Information

Coding Sequence
ATGAATTTTATGCTTACTGATGATGGTAAAACATTATTGGCTGTACGCCaaggaCAAGACGGAAATTTGGAACTGTTGACAGTTCCAGTAACAATTGTTCAAAATATTGCTGATGATTCTACAGGGTCATTAAAGGCTAcaaatattgacaaaattttaaatcaaaataaattaaatcacgTTCCTTCTAAGAATATTCAACAATCTAACGTACTTACAGAACAGGTAAATTCAAAATCTCAAAATATTCAAGTCTCTAAAGAAAACGTACATCAATCGGTGCAAATACAGAATCATTTTTCACACAAAATTCTTGAATATAATTCTAAGAATGTTGAAAAGACAACAGAAACATCTTCATcggaaaaagaacaaaattctGAAAATTTGCAAAGTATTTCTAGTTTGGAAACTTCTAGGAATGCAACAGAAAATCTTCCTCTTGAAATACAAGTACAAAAAAAACTTGGAAGACCAAGGAAAAATAGTAAAACTACCGACGAAAAGgCATATCTTAAGTGTGATATCTGTGGtcaagaatttaaaaaacagtATCTTATGCAAAAACACATGCACGAACATTCACAAGAAAAACCTCACCATTGTCCAAAATGTCCAGCATCTTTTAATGTACCAatTAATTTCACATTACACATGGCAACTCACAGTCTTGGTGAGCCTAAGTGTCCTGAGTGTGGACGAAAATTTGCGCGAATAGCAAGTCTTAAATCACACATGTTGGTACATGAAATGGACGAGAATCTTTATTGCACCGAATGTGAAGATTCCTTCGAGACGAGAtcCCAGTTGGAGGCCCACTTGAAGTTGCACAACGAAAAATGGTCAACGGACGACTATCGAAAGTGCAAACTCTGCCGCAAACAGTTCACTCAACCGGCCCTCTATCGTCAACACTTGCGAGATCATTATAAAATGCAGACGAAATTCACGAAGCAGACGAAACGAGGAATCAGACACAGGACCGTCTACAAGTGTAAGATATGCATGAAGCCGTTTGAGAAGCCGAGTCAACTCGTTCGACACATCAGAGTGCATACCGGTGAAAAGCCCTACAAAtgcaATTTGTGTAATCGAAGTTTTACGCAAAAAGGTTCTGTGAGAATTCACATGTGGCAACATAATGGAATTAGGCCATACAATTGCTCTTTTTGTCGTGCGAAATTTAGTCAAAAAGGCAATCTCAACGCTCACGTTCTCAGGGTACACAAAGCGCAGGAAGGTTTGCCGATGTATCGATGCACGCAGTGTCCCTGCATATTTAAAAAGCTCGGTAGCCTAAACGGCCACGTTAAACGCATGCACTGTAAGGATAAGTCGAGCTACGCCAACGAGGAAGCCGAGCCGAGCGACGAAGAAGTCAACGATCGGGTAAACGAGAACGAGGAGCGAATTAACGGCGTGGAAGACGATATCAGCAGCGCCGATAATCACGAACGACTACTGCCCGAAAACTTTGAGGACGGCTTTGTGCCCGCTAACGGCGCCGAACAAACGGCGGTTGTTACGATTCTCGACAGAACGTCCAACGACGCTAacgggaagtatgtaaaaataaagcaatgttttgtaaataattctAGATTTTATCAATGCTCCTTCtgtgataaaaaattcaaaaaacctTCCGATCTTATAAGACATTTAAGGATTCATACGCGAGAAAAACCATTCAAGtGTAAAATATGCGAACGatcttttactttaaaatcaaCAATGTTATCGCATGAAAAAACTCATTCGGAAACGAAGAAATATACTTGTCGCACGTGTTTCAAATCATTTATTTCCGAAAGTGCCCTTTCAACTCACGAAAAaatTCACAATAAAATTCCAAGTTTGGATCAATTAAAAGCGCAAGCATCAACGACTTATGGTGCTCGTAAAAATCgtcgaaaaaaacaatttgcACCAGAAGTTCAAAACTTGATGCCTGATATTATACTCAAAGAACCGTTAGTATTAACCAATGCCGGTAATGGACTGTTGCATGCTCAGCCAAAATTTCGTTACGATATTGCACATGACAAGGGTAGACCTCATAAATGTCCATCTTGCCCAGCTGCTTTTATGAAACTCAGTCACTTGAAACAACATCATCGTAAACATACCGGAGAAAGACCCTTCGTGTGTCCTGTATGTGACAGgaaatTTACAACTAATAGTGCATTAAAAGCTCATCGTCGGATACACGATTTAGTAAAACCTTACAAATGTACTCTTTGTAATATGAATTTCACAACTTTAAGTAATATGAAAAGACATCATGTTTCTCATAGTAATAAACGGCCTTACATGTGTCCatattgtaataaaacatttaaaacaacGGTGAACTGTAGAAAACATATGAAAATACATAAACAAGAAATAGCCCAGCAGGAGTTGGAGCGTCAAAAAAAGCAATATCAATCTGAAAATTCGACTTTAAATACCGTAGAAACTATAACAATTGAGGACTCGATCGCTGTTAATAATCAAGAAATAACGTTTAGACCACTTTCGAATAATTTATCTCAAAATCTAAATGAACATCAAACCATCGCAGAACAACATGTACCCGTAGTAAATAATCCTAATAATGGCCAAACTCAAACATTACATGCTGATGAGACAGGCACTGTTACCTTACCTAATTATACGGGTGATCAAACACTTACACCTCAAAATATTAGAGAAATTGAAGAAACGCTTAatcaacaattatttaatatcggAATGAATTTTGCAATGAATACTACCAGACAAATTGAAGAGCAAAGTGACAACTTAACTCGAGATCAGCCTGTTTTAAGCATAATTTATGATGATGGAAAAACTCTAGGATCCTCGATTAATACGCCTATAAATACAAACATGTTTCCTCCTCAATTCGACACTTTTGACATTAATCAAATGACACTAcagGTAAACAATGAAGTTGGTATGGGAACTAGTGAAAACAATTCAACAAATATTAACGGCGTATTACCTCAATCAATTCAAGAAAATCAATgttttaattctgaattaattaataacggATTTGATTTGAACACTGTTTTGCGACAAAATATGGCTAAAGACAATCAAATAACAGTTACTCAtacaacaaataatattaaaaataatacaaatattagTAACGAAAGCAATCTTCAGTGTCATTTATGCAATATTCAAAACTTTAATACTGCAAGCTTGCAAGAACATTTAAAAACACATCAAAACAATAAAGAATTCGAATGTAcgcattgttttttaaaattttgtacaaatgGGGTTTTTAATGAACATTTAAAAACACATGAAATTCAAGAaacATACAAATGTTATGAATGCAATCAAGAATTTCCTACTACACTGCAATTAAGAGAACATATTAAGCAGcatgtaaaaaaagaattagaacTTAAAAAGTCAACGGGAACTGATAACATCATCGATgacattcaattaaaaaacattgatggaactaatgaaaaaaataaaaagtccaaTGAATGCAAATATTGTCCAAAAACTTTTCGTAAGCCTAGCGACCTTATACGACATATAAGAACACATACTGGCGAACGACCGTATCAGTGTCAACATTGTACGAAAAGTTTTGCTGTTAAATGCACATTGGATTCTCATTTGAAAGTTCATGCAGGCGAAAAATCATTTCATTGCAATGTATGCAATACAATGTATGCAACGAAAAATAGCTTAAAAGTTCACATGCGATTACATACggGTGATAAACCACTCAAATGCCATTTATGTGACATGAGATTTCGTACGTCTGCACGTAGGAAAGTGCACCTTCTTTCTCATATTAAATCAAGTTCAccttctttaaataaattgatccAAGTCGAAACTGAAAAAGGCGAACAAGTTATACagattttacaaacaaattCTGATCCTCAAAGAGTAGTCTCACAAGAAACAAATATTCAGGATCAGAGTCTAAGTACTATGATTATGAATTCTGACCAGACTTATCTTCATAATAACGATAACGTATTGAATAGTGGATCGGAGTTTCTGACATTGAATGAAAACAATCAATTTGTTGCGAATCTTCAATATCTTTTAGAGAATGGCCTTGTTACAATACAAACGGATGATGATTCACCTCAGCTGCCAAATACGACGTGTGATTTTGTTACTACAAACATTACACAAAAAGATCAGGAGCAAGCGATCGAATCGCAAGTTATTTTCACTACACAAGTAACCGATACAGTAGAATCTTCCGCAACTGATACAAATAATTTACCATTGAATAACTGTATGGTATTACAATTAGAAAATATCGATTCAACAGTACCAGACACGATCGCGGAGAATGACTTGAAACAAACAAAATCTCTAAGTACTTCAACGAGACGTGAATGTGACGTATGTGGTAAAGTATTTGCAAAACCGTATCAACTCGAGCGACATAAACGTACACATACTGGCGAACGGCCTTTCAAATGCGACGTCTGTAATAAAGCTTTTACTCAAAAATCATCATTGCAAATACATCAGAAAAATCACACCGGTGATCGATCTCACATATGTCCTTACTGCTCGCGATCTTTTATACAAAATGGTAATCTTCAGACTCACCTTAGGCGGAAGCATAAAGTAGAATCAGCGGATAGCAAGAGATCGACTCAgcagtttataaattttgatccGAGGCTGTTGCACAGTATTGATGATGCAAAGGTGCTTAACTTCGATGACATTTCCTTCGTTGAACTTTTGAAGTGA
Protein Sequence
MNFMLTDDGKTLLAVRQGQDGNLELLTVPVTIVQNIADDSTGSLKATNIDKILNQNKLNHVPSKNIQQSNVLTEQVNSKSQNIQVSKENVHQSVQIQNHFSHKILEYNSKNVEKTTETSSSEKEQNSENLQSISSLETSRNATENLPLEIQVQKKLGRPRKNSKTTDEKAYLKCDICGQEFKKQYLMQKHMHEHSQEKPHHCPKCPASFNVPINFTLHMATHSLGEPKCPECGRKFARIASLKSHMLVHEMDENLYCTECEDSFETRSQLEAHLKLHNEKWSTDDYRKCKLCRKQFTQPALYRQHLRDHYKMQTKFTKQTKRGIRHRTVYKCKICMKPFEKPSQLVRHIRVHTGEKPYKCNLCNRSFTQKGSVRIHMWQHNGIRPYNCSFCRAKFSQKGNLNAHVLRVHKAQEGLPMYRCTQCPCIFKKLGSLNGHVKRMHCKDKSSYANEEAEPSDEEVNDRVNENEERINGVEDDISSADNHERLLPENFEDGFVPANGAEQTAVVTILDRTSNDANGKYVKIKQCFVNNSRFYQCSFCDKKFKKPSDLIRHLRIHTREKPFKCKICERSFTLKSTMLSHEKTHSETKKYTCRTCFKSFISESALSTHEKIHNKIPSLDQLKAQASTTYGARKNRRKKQFAPEVQNLMPDIILKEPLVLTNAGNGLLHAQPKFRYDIAHDKGRPHKCPSCPAAFMKLSHLKQHHRKHTGERPFVCPVCDRKFTTNSALKAHRRIHDLVKPYKCTLCNMNFTTLSNMKRHHVSHSNKRPYMCPYCNKTFKTTVNCRKHMKIHKQEIAQQELERQKKQYQSENSTLNTVETITIEDSIAVNNQEITFRPLSNNLSQNLNEHQTIAEQHVPVVNNPNNGQTQTLHADETGTVTLPNYTGDQTLTPQNIREIEETLNQQLFNIGMNFAMNTTRQIEEQSDNLTRDQPVLSIIYDDGKTLGSSINTPINTNMFPPQFDTFDINQMTLQVNNEVGMGTSENNSTNINGVLPQSIQENQCFNSELINNGFDLNTVLRQNMAKDNQITVTHTTNNIKNNTNISNESNLQCHLCNIQNFNTASLQEHLKTHQNNKEFECTHCFLKFCTNGVFNEHLKTHEIQETYKCYECNQEFPTTLQLREHIKQHVKKELELKKSTGTDNIIDDIQLKNIDGTNEKNKKSNECKYCPKTFRKPSDLIRHIRTHTGERPYQCQHCTKSFAVKCTLDSHLKVHAGEKSFHCNVCNTMYATKNSLKVHMRLHTGDKPLKCHLCDMRFRTSARRKVHLLSHIKSSSPSLNKLIQVETEKGEQVIQILQTNSDPQRVVSQETNIQDQSLSTMIMNSDQTYLHNNDNVLNSGSEFLTLNENNQFVANLQYLLENGLVTIQTDDDSPQLPNTTCDFVTTNITQKDQEQAIESQVIFTTQVTDTVESSATDTNNLPLNNCMVLQLENIDSTVPDTIAENDLKQTKSLSTSTRRECDVCGKVFAKPYQLERHKRTHTGERPFKCDVCNKAFTQKSSLQIHQKNHTGDRSHICPYCSRSFIQNGNLQTHLRRKHKVESADSKRSTQQFINFDPRLLHSIDDAKVLNFDDISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-