Basic Information

Gene Symbol
ncor1
Assembly
GCA_949987625.1
Location
OX465094.1:79955320-79971475[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.1 1.3e+04 -2.3 0.1 31 39 653 662 650 663 0.80
2 2 1.5e-08 2.6e-05 25.5 0.0 3 43 825 865 824 868 0.96

Sequence Information

Coding Sequence
ATGAGAGTCAGCTGGTGCAGAGAATCATCGACGACGATGGGATTCAGCGGGGAATGGCAGCCCCAGCAGAGCTACGGTTCGAGCTCACGTCAAGCGGTGTCTCCGCGGACGGTCGAGGGTAGCGGTGTCGGGGGCGTCGGGGGCGGTGGTGCTGCTGCGGCGGGTGGCGGCGGCGGGCCCGGCGCCGGTGGCAGCGGGGGCGCTGGCGGCGGCGTCGGCGCCGGTGGCCCTGGCAGCCTCGTCGTCGGCGGCGCCGCAGGGACGGCGCGCTACCCCCAGCATCATCAGCAGCAGCACCTCCACCAGCAAAGGCACCAAcatcaacagcagcagcaacaccatcgccagcagcagcagcagcaaccaCAGCCGCAGCCGCAGCCGCACCAACATCAACATCAACAAACGGTTTCGAGCTCGGTTAGCGGCGGCGTCCCCGGCAACGGCGGCCCGTCATCCGGATCACCCCACACGGCGGCTACTCATCACTTTTATCACTACCCCCATCTGCAGCCCGCTCACCATCAGCAGtatcaacagcagcagcaacagcagcagcagcagcttagCCACCAGGtcgccgccgctgctgccgccgccgccgcctcaTCATCGTCGGGATCGTTGGCGATGAACAGTGGCCCAGCTGGCGGCCCTGGCCAGCCACCAGCGGGACTACAAGCAACCTCCTCAACCTCTAGCTCGCGCGATCAGCATACGCAACAAGGAAGCGATCCAAGCGGCCTCAACATCACGATAATGAATATCACCGTACCGCCTGTAGTGCCGGTGCCCACGGGTCTGCGCTTCGTTCACCCGTAcctgccgccaccgccgccacaTCCGCATCCGGCCCCTCAATCCGCGACCTCGGTCGCCCAAGTTGCCCAGGTCGCCTCCTCGAACTCGGCCTCGCCCGTCTCCGCGTCTTCGGGCCCCTCGTCCATCGTTCAGCAGCAGGTTAACAGGCAGCATCCGCCCTCGGCGCCCTCCCCGGCCTCGGTCGTCTCCAGTGCGGCGGCCGCGTACACGCGCGATGTCTATCGCATCGCCAGTCCTAACATTAACGAGCGAGTGGCAATAAGTGTGAGCAGCAGTCCGGTATCTTCGCAGGTAGTCGGAGTCGCTGGAAATGAATACGTTGTGAGCGGTCGCGGCGATCGACCTCGGATATCTTTATTGCCGGCTCCAGCTAGCATCGCCCCGGCGGCCTCGCCCACCGCGCCTACGGATTACCATGCCGCGGCGGCGCGGAACAATCGGGGCGGCGGAGGCGCCGGCCAACCGACCGCTGGCCCTGGCGTCCTGGCCATGCAGCCGCAGGACTACCGTCCAAGTCCCGTGGACATGGTGCAGCTCCAGCAGGAAGCACCGCCTTTCAAAAAAATCCGCTTGGGACAGCCCGCTCAGCAACTGCCACCGActcagcagcaacagcagcagcagcagcagcagcagtcgaTATCGCAGACGGACAGTCAGAGGATTACGAGTGCGCAGGACACGCTGAATAAGCAAAAACATGTGCAGCAGCTGCAACCCCTCAGGATAGATACTAGGCCGACAGCTGGTGCGTATACTCCACAAACGGAAGCGATCTCCCCAACTCTCCCAGAGCCTAATACGCAGGAGGACGCAGCATTTAAGAGCACCAAAGACGATCTCCTTCAACAGATCGCCAAGGTTGATCGGGAAATCGCAAAAAGAGAATCGCAAATTGCGAAGCTTCGGAGAAAACTTATAGAATTGGAAGAAGTAGCTAGTAAACCCTTGGAGGCGCCTGGTACTAAGCGGCCTGTTGAAGAAGCGTCTCAGCAACCCAAGCATCAGTCCcttgtacaaaaaatttatgctgAAAATAGGaaaaaggcgGAAGAGGCGCACAGATTGTTAGAAAAACTAGGCCCGAAGGTTAAACTGCCACTCTACAATCAACCCTCAGACACAAGCGTCTATCAGGAGAATCGCACGAGGCATCAGTGTATGAAAGCTCGCCTCGTTGCTAGACTGCGCAAAGAACATGCGGAGCGCACATCTCTGCATCGTCAACAATCCCAGACATATGCGATACTCGTACAAGAGTGGCATCGTAAAGTAGAAAAGCTAGAATCCTCGCAGAAGCGCAAAACGAAGGAAGCCAAGAATCGCGAGTTCTTCGAAAAGGTTTTCCCAGAGCTGCGTAAGCAGCGCGAGGACAAAGAACGCTTCAACAGGGTTGGCGCACGTATCAAAAGCGAGGCTGATTTAGAAGAGATTATGGATGGTCTACAAGAGCAGGAGGAAGAGTTGTCGACCGAGTTAAAAAATGCGTTGAAAGCTCGTCAGATGGAGGACAAGAAGATGCGCTCGTATGCAGTAATACCGCCGCTGTTGTTGGACGCGAAGCAGCGGAAAATCGCATTTCAAAACCGTAACGGTTTGCTGCAGCCGGAGGAGCTCGAGGCGTTTTACAGCGAGAGAAAGCTTATAAATGTCTGGAGCGCGACCGAACACGAGCTGTTTAAGGAAAAGTACCTGCAGCATCCCAAGAATTTTGGAGCGATAGCCCAATCGTTCGAGCACAAGTCCGTGATGGACTGCGTGCATCATTACTACCTCACTAAAAAAGCGGAGAATTATAAGCAGCTACTGCGAAAATCGAGACGTACGCGTAGTTCTCGAAACAATCCTAACAATAAGGTAAATAATAGTAACTCCACTATCGGACCTATAGATATATTAACGACGGGAGTGACGACGAGGCTGCAGCGTGAGCAGCAACAGAAAACCCAAGAGAATCCTCAGAGTAGTGCGGCGGCGTCGAGTAGTAATAGCAGCGCGACCACGACGACGTCGACTTCATCCACGACGACGTCGACTCCATCTACGACGACTTCCTCGTCATCCTCTGTAAGCGTGACGAGCACTTCCTCTGTCACCACGACGTCATCGTCAAGTAACGCAGTCGCCGGCTCGTCTAGTAGCAGTAGCGCCGCCGCGAGCGCGAGTCTGAGTTCGGAATCCGCGACGACGACCGCGACCACGACGACGATAACGTCGACGGCGTCGGCAGCAGCGATGTCAGCATCCGTCCCGAGTACAAGCGccgcgacgacgacgtcgagcgTACTCACGACGACTTCCACGTCGTCGGCCAGCGCCAAGGACGCCCGCGAGGCGAACAAAGAAAACAAGgagattaaaaatgaatttaaagatACCATACTTCTTAAGGATATTAAGGAAGAGTCGCAATCGAGCTCTGAGACCCTTTCCAGTAGGGAAATAAAGGTCGAGAGCAAAGGCGCTCTGTCTTCGTCGTCCAATGCGAGCGTGGCTAACGCCAACAACGCTCAGCTTGaccaacaacagcaacagcagcagaaagataaaaagaaaaacgcgggCATAACTGGTGGCTCGACCGCTACTAGCAGGTCGAAGGACAAGAAGAAGGATAACCATGCGACGCCCATGGAGACCAGCGACGAGGAAGCCCAGTCGGTCGACGCGATGGCGATTGCTAGATTGGATTCTATAAACAATTTTCCCTGA
Protein Sequence
MRVSWCRESSTTMGFSGEWQPQQSYGSSSRQAVSPRTVEGSGVGGVGGGGAAAAGGGGGPGAGGSGGAGGGVGAGGPGSLVVGGAAGTARYPQHHQQQHLHQQRHQHQQQQQHHRQQQQQQPQPQPQPHQHQHQQTVSSSVSGGVPGNGGPSSGSPHTAATHHFYHYPHLQPAHHQQYQQQQQQQQQQLSHQVAAAAAAAAASSSSGSLAMNSGPAGGPGQPPAGLQATSSTSSSRDQHTQQGSDPSGLNITIMNITVPPVVPVPTGLRFVHPYLPPPPPHPHPAPQSATSVAQVAQVASSNSASPVSASSGPSSIVQQQVNRQHPPSAPSPASVVSSAAAAYTRDVYRIASPNINERVAISVSSSPVSSQVVGVAGNEYVVSGRGDRPRISLLPAPASIAPAASPTAPTDYHAAAARNNRGGGGAGQPTAGPGVLAMQPQDYRPSPVDMVQLQQEAPPFKKIRLGQPAQQLPPTQQQQQQQQQQQSISQTDSQRITSAQDTLNKQKHVQQLQPLRIDTRPTAGAYTPQTEAISPTLPEPNTQEDAAFKSTKDDLLQQIAKVDREIAKRESQIAKLRRKLIELEEVASKPLEAPGTKRPVEEASQQPKHQSLVQKIYAENRKKAEEAHRLLEKLGPKVKLPLYNQPSDTSVYQENRTRHQCMKARLVARLRKEHAERTSLHRQQSQTYAILVQEWHRKVEKLESSQKRKTKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEELSTELKNALKARQMEDKKMRSYAVIPPLLLDAKQRKIAFQNRNGLLQPEELEAFYSERKLINVWSATEHELFKEKYLQHPKNFGAIAQSFEHKSVMDCVHHYYLTKKAENYKQLLRKSRRTRSSRNNPNNKVNNSNSTIGPIDILTTGVTTRLQREQQQKTQENPQSSAAASSSNSSATTTTSTSSTTTSTPSTTTSSSSSVSVTSTSSVTTTSSSSNAVAGSSSSSSAAASASLSSESATTTATTTTITSTASAAAMSASVPSTSAATTTSSVLTTTSTSSASAKDAREANKENKEIKNEFKDTILLKDIKEESQSSSETLSSREIKVESKGALSSSSNASVANANNAQLDQQQQQQQKDKKKNAGITGGSTATSRSKDKKKDNHATPMETSDEEAQSVDAMAIARLDSINNFP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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