Csis037025.1
Basic Information
- Insect
- Chalcis sispes
- Gene Symbol
- Snapc4_1
- Assembly
- GCA_949987625.1
- Location
- OX465098.1:52128545-52133155[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.24 4.3e+02 2.4 0.0 22 43 234 257 221 260 0.74 2 5 1.1e-11 1.9e-08 35.5 1.2 1 44 266 311 266 319 0.97 3 5 0.0001 0.18 13.2 0.1 3 44 322 367 320 369 0.95 4 5 9.6e-14 1.7e-10 42.1 0.0 1 45 375 420 375 421 0.93 5 5 3.9e-12 7e-09 36.9 0.2 4 44 431 477 428 478 0.86
Sequence Information
- Coding Sequence
- ATGATTGATGAAGAAGACAATCAATCTCTGATAGATGAAATTCAGGCATTAGAAGATGTATTAGACTCAAATAAaagtgtaaataattataaatctattttaagtaataatacTTCAAATGCAAACACATTTTCAAAACTAGAAGCAAAATTACAAAGAGAACAATTTCAAAGAATAGATTCTGTAGATGAAAATGATCTTGTTACAAatgatgtttataaaaattatgattgtaaagatttacaagatttattagaattaaataaaaatttaattgaattgatTACAACAGCCCATAATAAAATGGTTATTCTACTTGAAGATTGTAGAAGAAAACAAAGTATGATTGCAGAGCAAATATCCAATAAATGTACGCTCTCAACTCattctaaaataataagttttaatgcTGGTATGccttattttaaagataaaaattactatacaCCTAAAAGAAATGAAGATACAGaaactaaaatgaaaaatggtGAATTACGATTATCTGAACTTCAAAGAATTCATCGCTGGAATCAATTTGATAAAAGTAGTTTATTAAAAGCTATAAGGCATGAAGTCacattaacattattaaataaaaaagaagaagaagaaaattacaTTGATAATTCAATTACTAAAACAAGTCAATTACCAGTTGATGTAAAAGAAGCTATTGGTTCATTAGGTTCAATGAAATTTGATTGGTTAAAAATAGCTAACAATATTCCTGAAAACAAACATAATGCAGAAGAATGTGAAGTTATGTGGAATGTTTTTTTACATCCTAGTATTAACAAACAAAAGTGGACTCCAcaagaagataaaaatttaaatcgcaccgttgaaaaatttaattttgaaaattgggATTTAATTGCAAGCGAATTAAATACCAAACGCAGTGGTTATCAGTGCTTTATTAGGTATAATACAAAcaattggaaaaatattatgaaaggtCAACAATGGTTACCGAGTGATGACAGACAGCTTAAAtatcttatacaaaaattaaaaataggtgATTATATACCATGGGGATATATTTCAAGTTTCATGAGTAATTGGACAAAACAAcaggtgTACTTTCGTTGGAATTATAGTTTAGCACcgcatttaaaaaaaggaagattttCACATGAAGAAGATAGAATGCTTTTAAATGCAGTAGAAAAATATGGTCCAAATTTCAGTAAAATATCTGCTCTTGTAATGAATAACAGAACTAACATACAATTAAAAGAACACTATCAAACACTAACAGCTAGAGGTCAAGAGAGTAAAAAGATTTGGACATTTGAAGATGATGATCTGTTGCTTaatcttcataaaaaatatgGATCGAACTGggcaaaaattgtaaaatatatccCAAATGTGTCAAGAGTTCAAGCAAGACAGCGCTACTCGTGTCTTATACGTTATCAAAAAAAAGGTGTTGACATAAAACGTATCAATAGATGTAAGAGTCCCGCATCAAATCATACAACTGTAACTTATACCAATATAGAATGCATTAGATTAAAAATGTTTGGTCCTCAAGAAACAATTTCAGAAAAACGATTCATACCTCCTTTACCATTTGGTTTTTGTTCTCCAAAATATCAAGCAAAAAATTATAGCAGTATTGATTTAAAACTGAATGTTAATGAATTTcatcaaacaaaattaattacagAATCTCAATTAGATAAAAGTATATCCGAATATCTAGGACAAGATATAGAagctgaatttgaaaaattgaaaaaagttttaacagATGAGACAGAttcaaaaaaaatgtattcaattaAATGCAAACCATTTGCTAATTCAATGTTTTTTCCTGAAGAAGTTGaaaatGCTTCTAATATGATGGAAAAGTCACAATATGACTGGGAATTAAATAGAATGGTTTCCAATAGTTTACCGAAAGAAAAATCTGTATTTGAAGAAATTCCTGCACTAATGATAGAACCAAATAGAACAACGCTACAGATGTACCAAGAACTCTTACTTATTTCAAGATTCACTTCAGATTCAAGCGAAGAAAATGTTAATCATAAATTAACTTTAAGAGGCCGAGGAgctttaagtttatttaaaagacGTTAtgaacaattatttcatataccTACTGGTTTATCTAGAATAATACCAACAGAAATTGTTGACATAAattaa
- Protein Sequence
- MIDEEDNQSLIDEIQALEDVLDSNKSVNNYKSILSNNTSNANTFSKLEAKLQREQFQRIDSVDENDLVTNDVYKNYDCKDLQDLLELNKNLIELITTAHNKMVILLEDCRRKQSMIAEQISNKCTLSTHSKIISFNAGMPYFKDKNYYTPKRNEDTETKMKNGELRLSELQRIHRWNQFDKSSLLKAIRHEVTLTLLNKKEEEENYIDNSITKTSQLPVDVKEAIGSLGSMKFDWLKIANNIPENKHNAEECEVMWNVFLHPSINKQKWTPQEDKNLNRTVEKFNFENWDLIASELNTKRSGYQCFIRYNTNNWKNIMKGQQWLPSDDRQLKYLIQKLKIGDYIPWGYISSFMSNWTKQQVYFRWNYSLAPHLKKGRFSHEEDRMLLNAVEKYGPNFSKISALVMNNRTNIQLKEHYQTLTARGQESKKIWTFEDDDLLLNLHKKYGSNWAKIVKYIPNVSRVQARQRYSCLIRYQKKGVDIKRINRCKSPASNHTTVTYTNIECIRLKMFGPQETISEKRFIPPLPFGFCSPKYQAKNYSSIDLKLNVNEFHQTKLITESQLDKSISEYLGQDIEAEFEKLKKVLTDETDSKKMYSIKCKPFANSMFFPEEVENASNMMEKSQYDWELNRMVSNSLPKEKSVFEEIPALMIEPNRTTLQMYQELLLISRFTSDSSEENVNHKLTLRGRGALSLFKRRYEQLFHIPTGLSRIIPTEIVDIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -