Csis000798.2
Basic Information
- Insect
- Chalcis sispes
- Gene Symbol
- retn
- Assembly
- GCA_949987625.1
- Location
- OX465094.1:13380523-13389541[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2e-19 1.3e-15 58.8 0.0 18 89 13 82 3 82 0.92 2 3 2 8e+03 -1.4 0.0 30 52 144 167 130 188 0.71 3 3 2.2 9.1e+03 -1.6 0.0 9 38 232 267 230 272 0.55
Sequence Information
- Coding Sequence
- ATGTATAAAATGAAGGTAGAAAAAGGTAGCGTTCGCTCGCCGATAAATCGGCTACCGATAATGGCAAAATCGGTCCTCGATCTCTACGAGCTCTACAATCTGGTGATCGCTCGTGGCGGCCTCGTCGACGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAAGGACTTCACCTCCCGTCGAGCATAACCTCCGCCGCCTTCACGTTGCGCACTCAATACATGAAATACCTCTACCCATACGAATGCGAGAAGAAGCACCTGTCAACGCCGTCGGAATTGCAAGCGGCGATCGACGGAAATCGTCGCGAGGGACGTCGCAGCACGTACGGTGCTTACGCGGGTGGAGGCgccggtggcggcggcggtcCCGTCGACGGACTCGTCCATCAGCGCAGTCCCTTGGCCTCGTTGCACGCCCAAATAACCCCGCTGTCCCTCGTTACCGTCGTCCAGCAAGCCACAGCGCAAGCCGGTGGACAGCATCAGGTCAATCCTCAGAGTCTCGTTAACGGTAGCGCGGCCCACACACCGATACCCCATCATCCTCATCATCCACAGCATCAGCAGGGCGGACTTGGACAGCCGCCCAATGCCGGCATAGCTCCAGACTTCGAGGTACGCATGGCGGAGTACATGAAGCATCTTCAACGCGAGATGGGTAGACGCGCGGCGGGCTCACCGCCCAGCGGTCTGATGAACCATCATCGACAGGGAAGCACATCTCCACCCGCGCGTTCGCCGTCGCGCGACGCCGCTTTCATCGAAATGTCGCGACTCACATTGTGGAACATGTACAATAACAATCTGCATCCGGGTATCGGTTATCCACCCCAAGCTGTATCGCCTCAACCTGGCTCTCATTCACCTTCGGCACATCCGGCCAGTCCTGAACCACAGAAGGAAGCCCTCGATTTGGGATTGAGatCGTCGCCGAGCTCATCGTCACCTGCGCGACAGAGTCCGCCATTGTCCGGCGCCAGTATCTCGATCAAACGCGAAATCGAACACAATTTATCCGCTGGAGAGAACAAGAGGCTACGCTTGGATGAAGACGGTCCACCGGAAAACAACCTTCCTGCTATTTCTGGTACACACATCAAGATTACAAATCGAGgggACGGTCGGGATAATTCACTGGTGGTTAGTATGGAATTAAATGGCGTCATGTACCAGGGTGTTCTGTTTGCACAGACGGACGGTAGGAGCAGCCTCGCGGCTTCTACCAATAACAATGAGACGAAGGCATCGTCGCGCAATGTCGTCTCGTGA
- Protein Sequence
- MYKMKVEKGSVRSPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKHLSTPSELQAAIDGNRREGRRSTYGAYAGGGAGGGGGPVDGLVHQRSPLASLHAQITPLSLVTVVQQATAQAGGQHQVNPQSLVNGSAAHTPIPHHPHHPQHQQGGLGQPPNAGIAPDFEVRMAEYMKHLQREMGRRAAGSPPSGLMNHHRQGSTSPPARSPSRDAAFIEMSRLTLWNMYNNNLHPGIGYPPQAVSPQPGSHSPSAHPASPEPQKEALDLGLRSSPSSSSPARQSPPLSGASISIKREIEHNLSAGENKRLRLDEDGPPENNLPAISGTHIKITNRGDGRDNSLVVSMELNGVMYQGVLFAQTDGRSSLAASTNNNETKASSRNVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00079598;
- 90% Identity
- -
- 80% Identity
- -