Cova003979.1
Basic Information
- Insect
- Chaetogeoica ovagalla
- Gene Symbol
- pnr
- Assembly
- GCA_032441825.1
- Location
- CM063726.1:2025542-2040338[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4 8.5e+03 -3.2 0.3 3 9 3 9 2 10 0.85 2 3 4.9e-18 1.2e-14 53.9 3.2 1 34 208 240 208 242 0.97 3 3 2.2e-18 5.6e-15 55.0 5.6 1 35 267 300 267 301 0.98
Sequence Information
- Coding Sequence
- ATGTTTCAATGTTCGTCGACGAGCACTGCCGGCGGAGCCAACGCAGGTGTCGTCTGTAGTGGTGACACGCAAAACGGTTACCGACACGGTGGTTACCTTCACGACAGGATAGTGTACGTTCCGCCGACCAAACCGAACATGTTCGGCCTCGCGCACCACCAACagtacggcggcggcggcggcggtccgcCGTCACAACCACCGGCGCCGCCGTTGCAGCCGTCGACGGCCGGCACCGCGATCCCGGGAACAGCGTGGCACAATTCGCCGTCTCCGGCCCACCATCAGAACGTCAGTCACCACGtggtcgtcgccgccgccgccggttcgccggccaacaacaacaacggcaataacaacaacagcgCGGGCGCGATCGCACCGGCGGCGGGCCGACACCCGAACGCTATTCAGTCGGCGTCCACCGGACACCATATAGTCGCGAGCGCTGTTCCGATGTCGTCGTCCCCGTCGACGGTCACTCCGCCGTTCTACCAGagcgccgccgctgccgcggCCGCAGCCGCCATGATGTGGCCGAATCCCGCGACCGCCGCTTTCCAAGCAGCCCATCACTACGACACGGGAGGAATGGATTTGCAGTTCGGTGACGGTCGGGAATGCGTCAACTGCGGCGCGATTTCCACGCCGTTGTGGCGCCGGGACGGCACGGGACATTATCTGTGCAACGCGTGCGGGCTGTACCACAAGATGAACGGAATGAACCGGCCGTTGGTCAAGCCAGCGAAACGATTAGTCGCTTTTGAGACTGCGTCCAACAGGCGTCTCGGCCTGTCGTGCACGAACTGCGGCACGCACATGACCACTCTGTGGAGGAGAAACAACGACGGCGAGCCCGTGTGCAACGCGTGCGGTCTGTACTACAAACTCCACGGCGTCAACAGGCCGTTGACGATGAGAAAAGACGGTATCCAGACGAGGAAGAGGAAACCGAAGAAACAGCCTCCGTCGTCTTCGAATTGCGCGTCGTCCAACGTGGAAAACGACCGGCAATCGTCTTCCGCGGTTACCGATCTATTAGtCAACAAACATCAGACGACGGAGATCAAACACGAACACTACGACGCGGCGGCGACTGCTGCGGCTGCTGCGGCCGCGGAACACTTCCTCTTCCCGGGATCGTCGGGCGGTGGTAACCACCATCATTCTCATCACGGCCATCAGCTGAGCGGCGGGTTCAGTTTTCCGTTGCCACAGGCTCCGGTGCCGGCCCACAACAGCTATCAACACCTGTTAAACGGTCACGTCAACAACAAACTGATGGCGTcctaa
- Protein Sequence
- MFQCSSTSTAGGANAGVVCSGDTQNGYRHGGYLHDRIVYVPPTKPNMFGLAHHQQYGGGGGGPPSQPPAPPLQPSTAGTAIPGTAWHNSPSPAHHQNVSHHVVVAAAAGSPANNNNGNNNNSAGAIAPAAGRHPNAIQSASTGHHIVASAVPMSSSPSTVTPPFYQSAAAAAAAAAMMWPNPATAAFQAAHHYDTGGMDLQFGDGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPAKRLVAFETASNRRLGLSCTNCGTHMTTLWRRNNDGEPVCNACGLYYKLHGVNRPLTMRKDGIQTRKRKPKKQPPSSSNCASSNVENDRQSSSAVTDLLVNKHQTTEIKHEHYDAAATAAAAAAAEHFLFPGSSGGGNHHHSHHGHQLSGGFSFPLPQAPVPAHNSYQHLLNGHVNNKLMAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -