Cova003981.2
Basic Information
- Insect
- Chaetogeoica ovagalla
- Gene Symbol
- pnr
- Assembly
- GCA_032441825.1
- Location
- CM063726.1:2110015-2123171[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-18 4.3e-15 55.3 3.2 1 34 204 236 204 238 0.97 2 2 3.9e-19 9.9e-16 57.4 4.8 1 36 304 338 304 338 0.98
Sequence Information
- Coding Sequence
- ATGTACGCGCAGAGGATTAACGGCGAGACCACCCTGTATTCGTCTGCTCTGCAACAATACTTTACTGCTTCTTCGCCCGAGCACATCCAACAACACCAGCAGAGCAACGTCATCACGTCCGTGGCCGGCAATCACATGTGGTCCACAGTGGTCTCCGAAGACGGTGTCGGCGAAGGATACTCTCCGACGTCGGCCGGAAGCGGCAACAAACAACAGCAgtccaacaacaacaacaacaacggcgGCGGATTACCGGCTTTCGCCCAGCGGTTCGCAACTCCCGCGGCTTCAGCGTACGCGGCCGCCGGCGGTCCTTCTTCTAGGGCGTCGTCGTACCATCCGATCGCTTCGTCCGGCGTGATGCCCTATCATGTGACAACCGCCGCGGCAATCAACAATTCCGGTggaacgtcgtcgtcggcggcggacGTCTCGTCGCTCCAGTGGGCGGCCGTGGCCGCTTCACACGGTTACCCGAACACCGACGGAACCATAAACTACGTGCCCATACCGAACAGCCAGGTCAGAAGCCGGTCGAACGCGTCGTTTTCTGCTGCCGCGTCGCTATCAGCCCTCGACGAGATGGAAATGTTTTGCGAGGGTCGAGAGTGCGTGAATTGCGGGGCGATTTCCACGCCGTTGTGGAGGCGCGACGGCAACGGCCATTACTTGTGCAACGCGTGCGGACTTTACCATAAGATGAACGGCATGAACAGGCCGTTAGTCAAACAACCCAAACGGCTGGTTaTGGCTTCCGGCCCGAGTTCGTCCAGTTCTGGGGATTTCTATAAGGGTCCTCTGTATCACCACGTGCCCACCAGTTTCACAAGATCTTCTTCCGGAGCCAGCGGACTCGAAGACAAAACTACAAGAAGAATGCAAAACGCGTCCAGGCGTCAAGGATTGCAGTGCACGAATTGTCAAACAAAAACTACATCGTTGTGGCGTAGAAATCAAGTGGGCGAGCCCGTGTGTAACGCTTGCGGTCTGTACTATAAGTTACACGGGGTTAAGAGACCGCTTACTATGAAAAAGGACTCTATTCagACAAGAAAGCGTAAGCCGAAGGGAGGATCTAAAATTGAACCTGAACCGAAGAGAATTAAACGGGAAATGCCGTCTGAACACAACTATAGTGACAGTCACCGTACGTCTGGTAGTATCTTAAATCATGGCAGTACCAATTCAGCTCTCGCCTACACCAGTCTGTATCAAACGACTACACATTTAAACCATCCGTACTATGATGTTATGAAGTCTGAACCATCGCAAGAATCTATCAGCAGTCCACATATAGTAAGCCTAGCACCttccaacaacaacaataacaacaacaataacaataacaacaacattaACACCAGCAACAAAGACAGACCTAGCGTTTTGACAATGTCTGTTATTTCCTAA
- Protein Sequence
- MYAQRINGETTLYSSALQQYFTASSPEHIQQHQQSNVITSVAGNHMWSTVVSEDGVGEGYSPTSAGSGNKQQQSNNNNNNGGGLPAFAQRFATPAASAYAAAGGPSSRASSYHPIASSGVMPYHVTTAAAINNSGGTSSSAADVSSLQWAAVAASHGYPNTDGTINYVPIPNSQVRSRSNASFSAAASLSALDEMEMFCEGRECVNCGAISTPLWRRDGNGHYLCNACGLYHKMNGMNRPLVKQPKRLVMASGPSSSSSGDFYKGPLYHHVPTSFTRSSSGASGLEDKTTRRMQNASRRQGLQCTNCQTKTTSLWRRNQVGEPVCNACGLYYKLHGVKRPLTMKKDSIQTRKRKPKGGSKIEPEPKRIKREMPSEHNYSDSHRTSGSILNHGSTNSALAYTSLYQTTTHLNHPYYDVMKSEPSQESISSPHIVSLAPSNNNNNNNNNNNNNINTSNKDRPSVLTMSVIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -