Cova005092.1
Basic Information
- Insect
- Chaetogeoica ovagalla
- Gene Symbol
- -
- Assembly
- GCA_032441825.1
- Location
- CM063727.1:5081187-5088209[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.13 13 6.8 1.1 2 23 172 194 171 194 0.96 2 25 0.0014 0.15 12.9 6.3 1 23 227 250 227 250 0.97 3 25 0.0073 0.75 10.7 1.7 2 23 503 525 502 525 0.95 4 25 1.3 1.3e+02 3.7 0.3 1 23 531 553 531 553 0.81 5 25 0.012 1.3 10.0 0.4 2 23 560 582 559 582 0.93 6 25 0.0052 0.54 11.1 2.1 2 23 780 802 779 802 0.95 7 25 0.84 87 4.2 0.4 1 23 808 830 808 830 0.89 8 25 0.013 1.3 9.9 1.5 2 23 837 859 836 859 0.94 9 25 0.0028 0.29 12.0 0.6 2 23 1057 1079 1056 1079 0.95 10 25 1.3 1.4e+02 3.6 0.8 1 23 1085 1107 1085 1107 0.85 11 25 0.056 5.7 7.9 2.4 2 23 1114 1136 1113 1136 0.94 12 25 0.82 84 4.3 2.9 2 23 1334 1356 1334 1356 0.94 13 25 5.4 5.6e+02 1.7 0.6 1 23 1362 1384 1362 1384 0.76 14 25 0.0094 0.97 10.3 3.0 2 23 1391 1413 1390 1413 0.95 15 25 0.00095 0.098 13.5 6.4 1 20 1487 1506 1487 1512 0.93 16 25 1.2 1.2e+02 3.8 0.6 3 23 1516 1536 1515 1536 0.95 17 25 0.012 1.2 10.0 0.6 2 23 1722 1744 1721 1744 0.96 18 25 0.013 1.3 10.0 0.3 1 23 1750 1772 1750 1772 0.96 19 25 0.00015 0.015 16.0 5.0 1 23 1778 1801 1778 1801 0.97 20 25 0.0039 0.4 11.5 1.3 1 23 1806 1829 1806 1829 0.91 21 25 0.019 2 9.4 0.2 2 19 2119 2136 2118 2137 0.94 22 25 0.01 1.1 10.2 5.7 1 23 2175 2198 2175 2198 0.95 23 25 0.095 9.8 7.2 0.1 5 19 2205 2219 2203 2222 0.92 24 25 0.12 12 6.9 3.6 1 20 2269 2288 2269 2292 0.91 25 25 0.025 2.6 9.0 2.4 1 23 2309 2332 2309 2333 0.93
Sequence Information
- Coding Sequence
- AtgatgaagaaaaatatacacgaatGTAAACATTGGAAAACAAGGGCTGTGTATCAGAACAGTTGCACTCCATCCAAACCATTGATTTGTGATGATTGTGgtgtacaaattaatttagtaGCGATTGAGTCAAACATTTTATCTAAACATGATCAATTTAGTAATGAACCATCTACTGAccaagaaaattacaataaaataatagacgaCCTAATAGAGTTACAAATGGAATCTGCCCCGATCAATAGTCAATTAGTCACAGATAAAATGATGGTAATTGACAATTTTTCCACACATAATGAATGTGGTGAAAAACcaaatgtcaataaaaaaactcATATGTTTGAACATACAAGCATACCATCGTTACTATCACATTTACAGCAGAGGATTGATGGCACTGAGGGAAGTGTACCTGTGAATACAAGTCAACCatctatgattattaataataaaattaactgttTGCAACAAAAGGTTCTCGACAAAAACAAGTCCTCAAGTAAAGCTGTCCAATGTAAAAAGTGCTTAAGGTATTTTTTCAGTGTAAGGATGTTGAAAATTCATTTACAAGTTAcacatgaaaaaatattaccatttGAGTGTGACATGTGTTTCAAAAAGCAGTATAGCGCGAATGCGGCCTTTAGCCATGCCAAAATACATGAAGAAGCCCGTTATCCGTGCACACAGTGTTATAGAATGTTTACTGTAAAACATCAACTGAAGAATCATATAAACAAGTGTCATAAAATTACAGCTGATACATCATTTTCCTCTACTTTGCCAAGTCAAAAACTGCAGGGAAGTACACATGACGATAGCCTGAAAAACAGTCAGTCAGTAGAAGTGGAAGTGATGCAGACACCAAACATTAAAGGGCACATTTCTGCTAACAAGTCTGCTATTTCCTGTTTACCAAGCAAACCACAGACTAAGACACAAAATATCATTAACAACAAGTCCAGTATATCCGATAGCCTAAATAAATCTCAATCCCAGAGATCAAATGTCAGTATGTCTAATGTTAATAAGTCTCTCATATCTCATAATCCAAACAAAGGACAAAAACCCCAGAAGCCAAATCCAAAAATACATAATGATGTTGCCACTAAGTCTGCTTTGTCCCATCATTCAAGTGTCTCACAAACACTTAAGATGCCAAATATTGAAGTGTCTCAATGTTCAGATGATGCAAAAATGCTTAAGACACATGATACAAAAATACCagtttcaatgaaattacaAAAGCCTGCCTTCAATGGTGTCACAccctataattataataaaacaaagcCAATCcagaaaacagaaaacaaattacacaTTGCTACCAAGAGATCTGTCTTACCAACAATGATTTCCTCATcagacataataaataatcatgtagaaactaacaaaaaagaatttttaaacacaaatctGTTGCCTAAAGTCAAACATCTAAACCAGGATGCACATAAAAAGGTTACAACCAAAGTAATTTCATTTAAGACAGATAACAAATGCAGCAAATGTGACAAGAAGTTCATCAACACAAAGTTGATGCAAATTCATTTCCAAATTATGCACAACAACATATTACCGTACGAATGTGATCTTTGTGGAAAAACACAACCTTCATATCGATCAGCGCTTGACCATGCCAAAAagcacataaataataaaagtattccaTGCGAATACTGTAATaagtcattttataatatgtcagTGAAAAAAGATCACATTCAAAATGAACACAATAACATAGAAACATTTGACAAGTGTTTAGCCAAAGTAAGTAAAACACAATTGCTCCAGAAACCAGACATTAATATCAATGTGGCCGCAGAAAAGTCCTTTATGCCCTTTAACATAAATGAAAGACAAGCACCGATAGACGTTGATGCGTTTGTTGATGGAAACAAATCCATGATTTCTTGTGACTTAAATAAAACAGTGAAGCTCCAGATTCCAATTAACATGAACATTACAGATAACAATTCTGTTGTTTCTTGTGAATCAATTGaatctcataataatataattgaagatATTACAGTCAAGTCTGTTTCGAGTCAACTGAACAATGCACTAACACATCAGACAATTGTTGGTCCATCCGAATGCGATAAacataacgaaattataactGTAATTGAAAATGATCTTCCTGTTCAGCTCAAAGAAAATTCAACATTCATGATTTCTTCATCAGGCATAATAAATAGTCATATACGAACTATTAACAAAAATCTTGTGAACTCAAAAGAGTTACCTGAAGTCTTACATCTTAATCAGAATGCACATAGAACGGTTTCAAGCAAAATTACTTCATATATGACAGATAATAAATGCAGCAAATGCGACAAGCATTTCGCCAATCCAAAGTTGGTGCAAATTCATTTCCAAATTAAGCACAACAACATATTACCATATGAATGTGATTTTTGTGGAAAAACACAACCGTCATATCGATCAGCGCTTGACCATGCTAGAAagcacataaataataaaagtattccaTGTGAACACTGTAGTAAGTCATTTTATAGTATGTCAATGAAAAAAGATCATATTCAAAATGAACACACTAACGTAGAAATATTTGACAAGTGTTTGGCCAAAGTAAGTAAAACACAATTGCTCCAGAAACCAGACATTAATATCAATGTGGCCGCAGAAAAGTCCTTTACGCCCTTTAGCATAAATGAAAGACAAGCACCGATAGATGTtgatgtgtgtgttgatggaAACAAATCCATGATTTCTTGTGACTTAAATAAAACAGTGAAGCTCCAGATTCCAATTAACATGAACATTACAGATAACAATTCTGTTGTTTCTTGTGAATCAATTGaatctcataataatataattgaagatACTACAGTCAAGTCTGTTTCGAGTCAACTGAACAATGCACTAACACATCAGACAATTGTTGGTCCCTCCGAATGCGATAAGCATAACGAAAGTATACCTGTAATTGAAAAGGATTGTCCTGTTCAGCTCAAAGAAGATCCATTAGTCATGATTTCTTCATCAGGCGTAATAAATAGTCATGTAGAaactaataacaaaaaactTGTGAACTCAAAAGAGTTACCTGAAGTCTTAAATCTAAATCAGAATGCACATAGATCGGTTTCAACCAATATTACTTCTTATATGGTAGATAATAAATGCAGCAAATGTGACAAGCAGTTCGCCAATCCAAAGTTGGTGCAAATTCATTTCCAAATTATGCACAACAACATATTACCGTACGAATGTGATCTTTGTGGAAAAACACAACCTTCACATCGATCAGCGCTTGACCATGCTAAAAagcacataaataataaacgtattccATGCAAACACTGTAATATGTCATTTTATAGTATGTCAATGAAAAGAGATCACattcaaaataaacacaataacatAGAAACATTTGACAAGTGTTTAGCCAAAGTAAGTAAAACACAATTGCTCCAGAAACCAGACATTAATATCGATATGGCCGCAAATAAGTCCTTTACACCCTTTAGCATAAATGAAAGACAAGCAACGATAAACGTTGATGCATGTGTTGATGGTAACAAATCCATGATTTCTTGtgatgtaaataaaacagtgAAGCCCCAGATTCCAATTGACATGCACATTACGGATAACAATTCTGTTGTTTCTTGTGAATCAATTGAATCtcataatagtataattgaaGATAGTGCAGTAAAGTCTGTTTCAAGCCAACTGAATAATGCACATCTGACAATTGTTGGTCCCTCCGAATGCAGTgagcataaaaaaattataactgaaaatcaaaatgatCTTTCTGTCCAGCTCAAAGAAGATCCACCATTCATGATTTCTTCATCAGACTTAATAAATAGTCATATACGgactaatagaaaaaaacttgTGAACACAGATCAACTACCTGATGTCTTGCATCttaatcaaaatgtatacaaacatGAAAtggttacaaataaatttaaaaaagttgaAGGAAGTGCCACATGCCACAATTGTAATATGCAGTTCCCCAACTTAAAATTAATGCATATTCACTTCCAAATTATACACAACAAGATATTACCTTATGAGTGCGATCTATGTGGAAGAAAACAATCGTCTTATCAATTGGCATTTAATCATGCTACGAAACATATAAATTCTAAGAGTCTTACATGCAAGCACTGTAAAAAgtcattttataatgtttcatTGAGGGCAGGTCACATGAAAAAAGAACACGGTCTTGTAGAAAAGTATCAATGCGATATATGCCATAATTGGTATAAGTTTTTACATACATTGAATTATCATAAGGAACGAGTGCATCAAATACAATCATCACCTTGTGACAATTTTGTCCCATCTTTCTGTGCTTTGAAGTCGAGTAAAAGCATTCCCTCCCGTGTTCTCCCATCTCGAAAGACACTTTCATCACACAAAGAGATGTATAAATTTCCATATCAATGTGACATCTGCGATAAACCATTCTATCACAAGTATCTACTTAATAGGCATTCGTGTAAAGTATGTGAACATGAAATGTTGTGTCATTACTGTGATATTGTGTTGAAAACAATGACTTCAATCAGTGACCATGTAAATTTACATGACGGCATAAATATGTACGCATGTATCAAATGTAACAGAATATATTCGtgcaaaaatgaaatgaataattatgtGTGGGTGTTGCCCAAAGACAATCATGAAATGCCTTCAATGGTACCAATTGTCGaacaacaaatacaaaaacaacagACCAATTCTCAACACGATAATGAGAGGACTAAGCATGAAGATAAATCAAAGACATATAATAACAAGAGCTCTGTTTCCAGTTCGGTTAAGCACCAACAAACACGAGAACAGCAAATCAAACCTCAGATCAAAGAGTGTACTGAGCAAGACAATGTACCACCAAATATACACCATAATGACAAGAGTGCTCTTCCCACTTTTTCAGATGAAACACAGATTAAACAGACTCTTCCTGGTCAACTCAAAGATTCAGCAATCGTGTCCTCAACAGATAaggtaataaaacataaaaacactCATCATAAAAAACTTGCAAAAACTATTCAATCTAACAACATTCTTCCCCGTTACCAGAATAAACAAAAAGCTGTTTCGCACGGAAATACATTGCTTGGTAATAATACCAAATGCCATATATGTGGCAAATTGTTCTTTAACTTAAAAGTAATGGAAATTCATATTCAAATTGTACATTTCAACATATTACCATTTAAGTGTGATCTATGTGgcaaaatttatcgaaatgttAAAACAGCCTTAGACCACGCTAAAATGCATGCAATGTTTGAATGTTTTTCATGCAAACATTGTGataagaaattttataaatcatcgACATTAGTGTATCACATGTCTCGTGAACACAAGGTTGTCAGTTTCCAGTGCGATCAGTGTAATAGACTGTACTCATCACCTTCGTCATTGTATGCCCATAAGTACCTAAAGCACAAAGCCATTCCAAAACCAGTTCAGATACATACTGATGAAATAAAAGTTGAAGCAAACCAGTGTGTTGTGTCCTATGACCAGAATGATGTGTCAGATACAGCTTCCATGTTTAGTGAGACCGATGAAAGACCAATAAGTACCAAAGGAAGTCATCTGATTGAACACGATGTGCCAGTGCTAATGTCATCACAAATGATGGATAAGcctgaaaaatgtattatacacattgaTAAAGTGCAAATTGATGAAAGCAAGTGTGTCGTGTCCCATGAGCAGAATGATGTGTTAGATGTAGCTTCCATGTGTAGTGAGACCGATGAAAGACCAATAAGTACCAAAGGAAGTCATCTGATTGAACACGATGTGCCAGTGCTAATGTCATCACAAATGATGGATAAGcctgaaaaatgtattatacacattgaTGAAAGCAAGTGTGTCGTGTCCCATGAGCAGAATGATGTGTTAGATGTAGCTTCCATGTGTAGTGAGACCGATGAAAGACCAACAAGTACCAAAGGAAGTCATCTGATTCAACATGATGATGTGCCAATGCCAATGTCATTACAAATAATGGATAAAcctgaaaaatgttttatacacattgATAAAATGCAAATTGATGGAAGCAAGTGTGTCGTGTCCCATGAGCAGAATGATGTGTCAGATGTAGCTTCCATGTGTAGTGAGGCtgatgaaaaacaaacaagtACCAAAGGAAGTCATCTGATTCAACATGATGATGTACCAGTGCCAATGTCATCACAAATAATGGATAAGcctgaaaaatgtattggtaACAAAATGACTACACAAACAGAAATTATGATTCCAGACAATGAAAGTTTATCTACAAACAATTCTACCCCATGCAGTTACTGTAACATGTCATTTGTGAATTCAAAATTGATGAATACTCATGTCTGGGAGGCGCACAACAAATTAATGCCATTTGAATGCGATCTGTGTggtgaaaaacaatttacctTGTTGGATGCATTCAAACATACCAACCTACATGCAATGAACTATCGCCATATTTGTGATCATTGCGAAAAGGAGTTTTTCAAACAATCACATTTGTTGGTTCATGTAAGTAAATACCATAAACAGTTCATTAAGTTTGAATGTGACAAGGAATATAAAACGCCAAAGTCATTGAAATCTCATGAGTCATTGAAGACCAAAAAAAAGCGCAGCATAGTGGACTATGATAAttattctaagaaaaaaatgaaaaaatatgagaatgaaaagaacaataaaaaatcacatttgttTGCTCATGTGAATAAATACCATAAAGTGTTTCACAGGTTTCAATGTAActtctgtgaaaaaaaatgtaaaacacttAAGTTGCTGGAGTTACATAATGCCTTTATGCACGTAAAGTCCTTAAAGActgtaaaaaaatgtgatataattaacaatactTACATGTGTGTTACTTGCCCAAACTTGTCGTTCAAGTTTAAAGTGGAACTACGAATGCACATGAAGACGCATCATGGCTTTCAACATCCcaccaattaa
- Protein Sequence
- MMKKNIHECKHWKTRAVYQNSCTPSKPLICDDCGVQINLVAIESNILSKHDQFSNEPSTDQENYNKIIDDLIELQMESAPINSQLVTDKMMVIDNFSTHNECGEKPNVNKKTHMFEHTSIPSLLSHLQQRIDGTEGSVPVNTSQPSMIINNKINCLQQKVLDKNKSSSKAVQCKKCLRYFFSVRMLKIHLQVTHEKILPFECDMCFKKQYSANAAFSHAKIHEEARYPCTQCYRMFTVKHQLKNHINKCHKITADTSFSSTLPSQKLQGSTHDDSLKNSQSVEVEVMQTPNIKGHISANKSAISCLPSKPQTKTQNIINNKSSISDSLNKSQSQRSNVSMSNVNKSLISHNPNKGQKPQKPNPKIHNDVATKSALSHHSSVSQTLKMPNIEVSQCSDDAKMLKTHDTKIPVSMKLQKPAFNGVTPYNYNKTKPIQKTENKLHIATKRSVLPTMISSSDIINNHVETNKKEFLNTNLLPKVKHLNQDAHKKVTTKVISFKTDNKCSKCDKKFINTKLMQIHFQIMHNNILPYECDLCGKTQPSYRSALDHAKKHINNKSIPCEYCNKSFYNMSVKKDHIQNEHNNIETFDKCLAKVSKTQLLQKPDININVAAEKSFMPFNINERQAPIDVDAFVDGNKSMISCDLNKTVKLQIPINMNITDNNSVVSCESIESHNNIIEDITVKSVSSQLNNALTHQTIVGPSECDKHNEIITVIENDLPVQLKENSTFMISSSGIINSHIRTINKNLVNSKELPEVLHLNQNAHRTVSSKITSYMTDNKCSKCDKHFANPKLVQIHFQIKHNNILPYECDFCGKTQPSYRSALDHARKHINNKSIPCEHCSKSFYSMSMKKDHIQNEHTNVEIFDKCLAKVSKTQLLQKPDININVAAEKSFTPFSINERQAPIDVDVCVDGNKSMISCDLNKTVKLQIPINMNITDNNSVVSCESIESHNNIIEDTTVKSVSSQLNNALTHQTIVGPSECDKHNESIPVIEKDCPVQLKEDPLVMISSSGVINSHVETNNKKLVNSKELPEVLNLNQNAHRSVSTNITSYMVDNKCSKCDKQFANPKLVQIHFQIMHNNILPYECDLCGKTQPSHRSALDHAKKHINNKRIPCKHCNMSFYSMSMKRDHIQNKHNNIETFDKCLAKVSKTQLLQKPDINIDMAANKSFTPFSINERQATINVDACVDGNKSMISCDVNKTVKPQIPIDMHITDNNSVVSCESIESHNSIIEDSAVKSVSSQLNNAHLTIVGPSECSEHKKIITENQNDLSVQLKEDPPFMISSSDLINSHIRTNRKKLVNTDQLPDVLHLNQNVYKHEMVTNKFKKVEGSATCHNCNMQFPNLKLMHIHFQIIHNKILPYECDLCGRKQSSYQLAFNHATKHINSKSLTCKHCKKSFYNVSLRAGHMKKEHGLVEKYQCDICHNWYKFLHTLNYHKERVHQIQSSPCDNFVPSFCALKSSKSIPSRVLPSRKTLSSHKEMYKFPYQCDICDKPFYHKYLLNRHSCKVCEHEMLCHYCDIVLKTMTSISDHVNLHDGINMYACIKCNRIYSCKNEMNNYVWVLPKDNHEMPSMVPIVEQQIQKQQTNSQHDNERTKHEDKSKTYNNKSSVSSSVKHQQTREQQIKPQIKECTEQDNVPPNIHHNDKSALPTFSDETQIKQTLPGQLKDSAIVSSTDKVIKHKNTHHKKLAKTIQSNNILPRYQNKQKAVSHGNTLLGNNTKCHICGKLFFNLKVMEIHIQIVHFNILPFKCDLCGKIYRNVKTALDHAKMHAMFECFSCKHCDKKFYKSSTLVYHMSREHKVVSFQCDQCNRLYSSPSSLYAHKYLKHKAIPKPVQIHTDEIKVEANQCVVSYDQNDVSDTASMFSETDERPISTKGSHLIEHDVPVLMSSQMMDKPEKCIIHIDKVQIDESKCVVSHEQNDVLDVASMCSETDERPISTKGSHLIEHDVPVLMSSQMMDKPEKCIIHIDESKCVVSHEQNDVLDVASMCSETDERPTSTKGSHLIQHDDVPMPMSLQIMDKPEKCFIHIDKMQIDGSKCVVSHEQNDVSDVASMCSEADEKQTSTKGSHLIQHDDVPVPMSSQIMDKPEKCIGNKMTTQTEIMIPDNESLSTNNSTPCSYCNMSFVNSKLMNTHVWEAHNKLMPFECDLCGEKQFTLLDAFKHTNLHAMNYRHICDHCEKEFFKQSHLLVHVSKYHKQFIKFECDKEYKTPKSLKSHESLKTKKKRSIVDYDNYSKKKMKKYENEKNNKKSHLFAHVNKYHKVFHRFQCNFCEKKCKTLKLLELHNAFMHVKSLKTVKKCDIINNTYMCVTCPNLSFKFKVELRMHMKTHHGFQHPTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -