Basic Information

Insect: Chaetogeoica ovagalla
Gene Symbol: -
Assembly: GCA_032441825.1
Location: CM063725.1:8137727-8141560[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0093 0.96 10.4 2.4 1 23 136 159 136 159 0.93

2 9 0.00012 0.013 16.3 1.1 1 23 164 186 164 186 0.96

3 9 0.43 44 5.1 4.0 1 22 253 274 253 277 0.90

4 9 5.2e-05 0.0054 17.4 1.3 2 23 290 311 290 311 0.97

5 9 7.2e-05 0.0074 17.0 4.5 1 23 355 377 355 377 0.97

6 9 0.009 0.93 10.4 2.6 2 23 382 403 381 403 0.95

7 9 0.00031 0.032 15.0 2.0 1 23 450 473 450 473 0.97

8 9 0.053 5.5 8.0 0.4 2 23 489 510 488 510 0.94

9 9 0.0098 1 10.3 0.4 2 20 517 535 516 537 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0093	0.96	10.4	2.4	1	23	136	159	136	159	0.93
2	9	0.00012	0.013	16.3	1.1	1	23	164	186	164	186	0.96
3	9	0.43	44	5.1	4.0	1	22	253	274	253	277	0.90
4	9	5.2e-05	0.0054	17.4	1.3	2	23	290	311	290	311	0.97
5	9	7.2e-05	0.0074	17.0	4.5	1	23	355	377	355	377	0.97
6	9	0.009	0.93	10.4	2.6	2	23	382	403	381	403	0.95
7	9	0.00031	0.032	15.0	2.0	1	23	450	473	450	473	0.97
8	9	0.053	5.5	8.0	0.4	2	23	489	510	488	510	0.94
9	9	0.0098	1	10.3	0.4	2	20	517	535	516	537	0.94

Sequence Information

Coding Sequence: ATGACCAACTATACAaccgttaaatttaataatctgCCTATGGCTTGTAACTTGCATCCGTATGTCGTACTTACCCGATTGACTGAAGAGGATATCACGCGCAACACTAATCAGAATTTCCGACTTCATTCGACTTTATCCAGCATGGACAATCGAGTTTTTGAAGAAGTTACGATTAAACAAGAATTTGAGGACGACTATGTAGTCGATGACAATATCCAAAATTATGAaaatacagTAATGTGTGATCCGTGCGAACTGATAGAACTAGAATATGGAACTGATATAAAAACAGAAGCTGTTGATGatcatgaaataaaaatggaacCTGTAGATACATTTGAAAACACTACTGATGATAATGATACAGCTTCATCAAATTCTATTAGAAGCTCCCGTGGAAAATTCAGTTGTGATATTTGccacaattttttcaataataataatgattttattattcataaatatatttcgcatACAGAGAAGCCTTATACATGTAAAATCTGTAATGCAAAATTCAATCTTAGAgctcatttaaatatacatataagtgaCCATGTTGATTATATTCACATGAAAGAATCAAGTCTTGAGACAGATATTCAGTTATCATCTACAAGCAATTTGAAAttggatttaaataaattaaaatcatccGTAAAATTAACAAGAAATGTCTACCAAGAAGTACTACAGGAAAGGTCATCGGTCCAAAACTGTTATGTACCTTTAAAAAGTACTATGACACGCAAATCATTTAAGTGTCcgaattgtaattttgtaacTATGTCTGAAGCTAAATTTTCACATCACCAAAGTATTTGTAATCATATCCCTACAAGTTCTGAAACTCATAATAGTCCCAATAGCTGTAAACTATGCACCAGAACATTCATAAATCGAACTGCATTAAATGGACATATGAGATATCATAGTTTAAGGGGTGAGATAATTTCTAAAAGGaaaaatgctttaaaaaatagaatgcTTAATGAtcagaatgaaaataattttgtacataaatcTAGTAATGTAAGGGAGACAGAAAGTGTAACAAATGGTCACAAATGTAAAGATTgcaataaaaagtttattacatataataaattgaatattcatCAGTTGCAgcacaaaaaacaaatgatgTGTAATTTGTgtaacaaacaatttttcttgaaaaaaagctttgaaaaacacttattatttcataaacgttataaaatagcAAGTGATCAACAAGAACTCGAAGAATCAGTGCAGCACAAATCATTGCATACACAAATgttcaacaatattaataacataaatccaaaaaaaaaaaaaaaacttctgaTAACAATAAAACCATATCAGTGTAGCTATTGCAAACAGTTCTACAGTACAGAGAGATCTCTGGGAGAGCACATTAGACAGTTCCATATTGAAATGAAACCAGTATATCGAAGTTTTAAATTGGAATCCACTAAATGTAACTGGTGtaacgcaataataacaaaagcTAACTTGTTCCGTCATGTTAAATCTTTACATCCTGAAGTTGATCCAGTAAAGTGTTCATATTGCTTCATGAGTTTTAAAGATTTTCCTTCAATGAAATCACATATTTCTgaatgtcaaaaaaattag
Protein Sequence: MTNYTTVKFNNLPMACNLHPYVVLTRLTEEDITRNTNQNFRLHSTLSSMDNRVFEEVTIKQEFEDDYVVDDNIQNYENTVMCDPCELIELEYGTDIKTEAVDDHEIKMEPVDTFENTTDDNDTASSNSIRSSRGKFSCDICHNFFNNNNDFIIHKYISHTEKPYTCKICNAKFNLRAHLNIHISDHVDYIHMKESSLETDIQLSSTSNLKLDLNKLKSSVKLTRNVYQEVLQERSSVQNCYVPLKSTMTRKSFKCPNCNFVTMSEAKFSHHQSICNHIPTSSETHNSPNSCKLCTRTFINRTALNGHMRYHSLRGEIISKRKNALKNRMLNDQNENNFVHKSSNVRETESVTNGHKCKDCNKKFITYNKLNIHQLQHKKQMMCNLCNKQFFLKKSFEKHLLFHKRYKIASDQQELEESVQHKSLHTQMFNNINNINPKKKKKLLITIKPYQCSYCKQFYSTERSLGEHIRQFHIEMKPVYRSFKLESTKCNWCNAIITKANLFRHVKSLHPEVDPVKCSYCFMSFKDFPSMKSHISECQKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -